FFCP PHASE1:Hg19::chr19:15087847..15087849,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6511 | |EntrezGene=6511 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10944 | |HGNC=10944 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_ENST00000542610_5end | |association_with_transcript=-8bp_to_ENST00000542610_5end | ||
|cluster_id=chr19:15087847..15087849,- | |||
|description=CAGE_peak_7_at_SLC1A6_5end | |description=CAGE_peak_7_at_SLC1A6_5end | ||
|id=chr19:15087847..15087849,- | |id=chr19:15087847..15087849,- | ||
|ontology_enrichment_celltype=CL:0002322!6.86e-16!5;CL:0000540!1.89e-09!6;CL:0000031!1.89e-09!6;CL:0000404!1.89e-09!6;CL:0000047!4.46e-07!8 | |ontology_enrichment_celltype=CL:0002322!6.86e-16!5;CL:0000540!1.89e-09!6;CL:0000031!1.89e-09!6;CL:0000404!1.89e-09!6;CL:0000047!4.46e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002541;8.31e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,8.31e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.59e-30;3!UBERON:0005425;2.93e-23;1!UBERON:0003056;1.17e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.04e-33!57;UBERON:0005068!1.04e-33!57;UBERON:0006241!1.04e-33!57;UBERON:0007135!1.04e-33!57;UBERON:0002616!2.41e-32!59;UBERON:0001869!1.54e-30!32;UBERON:0000073!2.71e-30!94;UBERON:0001016!2.71e-30!94;UBERON:0005743!1.28e-29!86;UBERON:0001017!2.38e-29!82;UBERON:0001893!1.65e-28!34;UBERON:0002780!2.45e-28!41;UBERON:0001890!2.45e-28!41;UBERON:0006240!2.45e-28!41;UBERON:0003080!1.50e-27!42;UBERON:0002791!2.14e-26!33;UBERON:0000955!3.19e-26!69;UBERON:0006238!3.19e-26!69;UBERON:0002346!7.16e-26!90;UBERON:0002020!1.66e-25!34;UBERON:0003528!1.66e-25!34;UBERON:0003075!1.96e-25!86;UBERON:0007284!1.96e-25!86;UBERON:0002619!1.45e-24!22;UBERON:0001950!1.65e-23!20;UBERON:0000956!2.46e-21!25;UBERON:0000203!2.46e-21!25;UBERON:0003056!3.37e-21!61;UBERON:0000924!4.93e-21!173;UBERON:0006601!4.93e-21!173;UBERON:0004121!2.00e-20!169;UBERON:0007023!2.46e-17!115;UBERON:0000033!2.25e-15!123;UBERON:0000153!2.49e-14!129;UBERON:0007811!2.49e-14!129;UBERON:0002420!2.09e-12!9;UBERON:0007245!2.09e-12!9;UBERON:0010009!2.09e-12!9;UBERON:0010011!2.09e-12!9;UBERON:0000454!2.09e-12!9;UBERON:0004732!7.04e-12!13;UBERON:0001872!9.80e-11!5;UBERON:0000349!1.99e-10!5;UBERON:0004733!1.69e-09!12;UBERON:0002028!1.69e-09!12;UBERON:0007277!1.69e-09!12;UBERON:0000064!2.21e-09!219;UBERON:0000369!7.02e-08!4;UBERON:0002435!7.02e-08!4;UBERON:0000204!7.02e-08!4;UBERON:0010082!7.02e-08!4;UBERON:0001876!1.32e-07!2;UBERON:0009663!1.80e-07!7;UBERON:0003076!1.87e-07!15;UBERON:0003057!1.87e-07!15;UBERON:0001871!7.26e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.93e-23;1!UBERON:0001785;2.93e-23;1!UBERON:0002464;2.93e-23;1!UBERON:0004904;2.93e-23;1!UBERON:0001021;2.93e-23;1!UBERON:0004732;6.82e-16;13!UBERON:0002037;1.22e-15;6!UBERON:0003714;2.45e-12;2!UBERON:0005162;2.45e-12;2!UBERON:0000122;2.45e-12;2!UBERON:0002680;9.23e-11;9!UBERON:0001895;9.23e-11;9!UBERON:0003124;8.31e-09;3!UBERON:0000920;8.31e-09;3!UBERON:0002114;1.17e-08;2!UBERON:0004733;2.65e-08;12!UBERON:0002028;2.65e-08;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.28e-23,1;UBERON:0001785,3.28e-23,1;UBERON:0002464,3.28e-23,1;UBERON:0004904,3.28e-23,1;UBERON:0001021,3.28e-23,1;UBERON:0003902,3.28e-23,1;UBERON:0005425,3.28e-23,1;UBERON:0004732,6.01e-16,13;UBERON:0002037,9.74e-16,6;UBERON:0006215,9.74e-16,6;UBERON:0003714,2.59e-12,2;UBERON:0005162,2.59e-12,2;UBERON:0000122,2.59e-12,2;UBERON:0002680,7.96e-11,9;UBERON:0001895,7.96e-11,9;UBERON:0010092,7.96e-11,9;UBERON:0000920,8.31e-09,3;UBERON:0002114,1.04e-08,2;UBERON:0001016,1.32e-08,89;UBERON:0004733,2.37e-08,12;UBERON:0002028,2.37e-08,12;UBERON:0007277,2.37e-08,12;UBERON:0000073,6.41e-07,53;UBERON:0002616,6.41e-07,53;UBERON:0003076,7.41e-07,15;UBERON:0003057,7.41e-07,15;UBERON:0003075,8.50e-07,82;UBERON:0007284,8.50e-07,82;UBERON:0001781,8.61e-07,4;UBERON:0001017,8.73e-07,81 | |||
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| ||
|short_description=p7@SLC1A6 | |short_description=p7@SLC1A6 | ||
}} | }} |
Latest revision as of 06:32, 16 September 2015
Short description: | p7@SLC1A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SLC1A6_5end |
Coexpression cluster: | NA |
Association with transcript: | -8bp_to_ENST00000542610_5end |
EntrezGene: | SLC1A6 |
HGNC: | 10944 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 8.31e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.28e-23 | 1 |
cranial nerve | 3.28e-23 | 1 |
nerve trunk | 3.28e-23 | 1 |
nerve connecting eye with brain | 3.28e-23 | 1 |
nerve | 3.28e-23 | 1 |
retinal neural layer | 3.28e-23 | 1 |
presumptive neural retina | 3.28e-23 | 1 |
segmental subdivision of nervous system | 6.01e-16 | 13 |
cerebellum | 9.74e-16 | 6 |
rhombic lip | 9.74e-16 | 6 |
neural tissue | 2.59e-12 | 2 |
multi cell component structure | 2.59e-12 | 2 |
neuron projection bundle | 2.59e-12 | 2 |
regional part of metencephalon | 7.96e-11 | 9 |
metencephalon | 7.96e-11 | 9 |
future metencephalon | 7.96e-11 | 9 |
egg chorion | 8.31e-09 | 3 |
duodenum | 1.04e-08 | 2 |
nervous system | 1.32e-08 | 89 |
segmental subdivision of hindbrain | 2.37e-08 | 12 |
hindbrain | 2.37e-08 | 12 |
presumptive hindbrain | 2.37e-08 | 12 |
regional part of nervous system | 6.41e-07 | 53 |
regional part of brain | 6.41e-07 | 53 |
posterior neural tube | 7.41e-07 | 15 |
chordal neural plate | 7.41e-07 | 15 |
neural plate | 8.50e-07 | 82 |
presumptive neural plate | 8.50e-07 | 82 |
layer of retina | 8.61e-07 | 4 |
central nervous system | 8.73e-07 | 81 |