FFCP PHASE1:Hg19::chr19:8642289..8642353,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4542 | |EntrezGene=4542 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7600 | |HGNC=7600 | ||
|TSSclassifier=strong | |||
|UniProt=O00160,Q4LE34 | |UniProt=O00160,Q4LE34 | ||
|association_with_transcript=0bp_to_ENST00000338257,NM_012335,uc002mkg.2,uc002mkh.2,uc010xkf.1_5end | |association_with_transcript=0bp_to_ENST00000338257,NM_012335,uc002mkg.2,uc002mkh.2,uc010xkf.1_5end | ||
|cluster_id=chr19:8642289..8642353,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_MYO1F_5end | |description=CAGE_peak_1_at_MYO1F_5end | ||
|id=chr19:8642289..8642353,- | |id=chr19:8642289..8642353,- | ||
|ontology_enrichment_celltype=CL:0000037!3.26e-71!172;CL:0000566!3.26e-71!172;CL:0002032!1.51e-67!165;CL:0000837!1.51e-67!165;CL:0000988!2.67e-63!182;CL:0000738!2.00e-58!140;CL:0000763!2.66e-53!112;CL:0000049!2.66e-53!112;CL:0002031!6.51e-48!124;CL:0002087!9.64e-47!119;CL:0000766!1.82e-41!76;CL:0000557!1.66e-36!71;CL:0000839!2.79e-35!70;CL:0002009!1.20e-33!65;CL:0002194!5.34e-33!63;CL:0000576!5.34e-33!63;CL:0000040!5.34e-33!63;CL:0000559!5.34e-33!63;CL:0002057!4.08e-30!42;CL:0000860!2.48e-26!45;CL:0000134!3.26e-15!358;CL:0002320!1.16e-13!365;CL:0000542!1.74e-12!53;CL:0000051!1.74e-12!53;CL:0000838!2.76e-12!52;CL:0000219!2.28e-10!390;CL:0000791!1.93e-09!18;CL:0000789!1.93e-09!18;CL:0002420!1.93e-09!18;CL:0002419!1.93e-09!18;CL:0000790!1.93e-09!18;CL:0000084!7.88e-09!25;CL:0000827!7.88e-09!25;CL:0000094!1.86e-07!8;CL:0002393!2.13e-07!9;CL:0002397!2.13e-07!9;CL:0000625!7.43e-07!11 | |ontology_enrichment_celltype=CL:0000037!3.26e-71!172;CL:0000566!3.26e-71!172;CL:0002032!1.51e-67!165;CL:0000837!1.51e-67!165;CL:0000988!2.67e-63!182;CL:0000738!2.00e-58!140;CL:0000763!2.66e-53!112;CL:0000049!2.66e-53!112;CL:0002031!6.51e-48!124;CL:0002087!9.64e-47!119;CL:0000766!1.82e-41!76;CL:0000557!1.66e-36!71;CL:0000839!2.79e-35!70;CL:0002009!1.20e-33!65;CL:0002194!5.34e-33!63;CL:0000576!5.34e-33!63;CL:0000040!5.34e-33!63;CL:0000559!5.34e-33!63;CL:0002057!4.08e-30!42;CL:0000860!2.48e-26!45;CL:0000134!3.26e-15!358;CL:0002320!1.16e-13!365;CL:0000542!1.74e-12!53;CL:0000051!1.74e-12!53;CL:0000838!2.76e-12!52;CL:0000219!2.28e-10!390;CL:0000791!1.93e-09!18;CL:0000789!1.93e-09!18;CL:0002420!1.93e-09!18;CL:0002419!1.93e-09!18;CL:0000790!1.93e-09!18;CL:0000084!7.88e-09!25;CL:0000827!7.88e-09!25;CL:0000094!1.86e-07!8;CL:0002393!2.13e-07!9;CL:0002397!2.13e-07!9;CL:0000625!7.43e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.38e-24;33!CL:0002057;1.38e-24;33!CL:0000473;6.04e-24;39!CL:0000234;6.04e-24;39!CL:0000576;9.81e-24;48!CL:0000766;1.25e-21;69!CL:0000763;4.37e-18;100!CL:0000738;6.24e-15;136!CL:0002087;9.92e-15;104!CL:0000988;5.04e-12;177!CL:0000791;1.83e-10;18!CL:0000789;1.83e-10;18!CL:0002419;1.83e-10;18!CL:0000084;5.08e-10;25!CL:0000094;3.24e-08;8!CL:0000542;4.07e-08;53!CL:0000625;1.57e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.06e-80,168;CL:0002032,6.14e-77,161;CL:0000837,6.14e-77,161;CL:0000988,1.28e-72,177;CL:0000738,6.97e-69,136;CL:0000763,9.50e-62,108;CL:0000049,9.50e-62,108;CL:0002031,1.20e-57,120;CL:0002087,2.24e-56,115;CL:0000766,3.98e-52,72;CL:0000557,2.65e-46,67;CL:0000839,7.61e-45,66;CL:0002009,4.08e-43,61;CL:0002194,1.95e-42,59;CL:0000576,1.95e-42,59;CL:0000040,1.95e-42,59;CL:0000559,1.95e-42,59;CL:0000473,1.06e-37,48;CL:0000234,1.06e-37,48;CL:0000860,8.50e-34,42;CL:0002057,8.50e-34,42;CL:0000542,1.48e-13,53;CL:0000051,1.48e-13,53;CL:0000838,2.50e-13,52;CL:0000134,3.53e-12,354;CL:0002320,4.97e-11,361;CL:0000791,1.88e-10,18;CL:0000789,1.88e-10,18;CL:0002420,1.88e-10,18;CL:0002419,1.88e-10,18;CL:0000790,1.88e-10,18;CL:0000084,5.34e-10,25;CL:0000827,5.34e-10,25;CL:0000094,3.24e-08,8;CL:0002393,3.78e-08,9;CL:0002397,3.78e-08,9;CL:0000219,1.19e-07,386;CL:0000625,1.54e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.00e-24;42!CL:0000049;5.72e-17;108!CL:0000790;1.83e-10;18!CL:0000051;4.07e-08;53 | |||
|ontology_enrichment_disease=DOID:8692!4.25e-11!31;DOID:1240!2.21e-10!39;DOID:2531!5.36e-10!51;DOID:0060083!5.36e-10!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.18e-09;31!DOID:1240;1.97e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,4.44e-10,31;DOID:1240,7.46e-10,39;DOID:2531,4.57e-09,51;DOID:0060083,4.57e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.42e-40!102;UBERON:0003061!3.42e-40!102;UBERON:0002193!2.74e-35!112;UBERON:0002371!2.21e-31!80;UBERON:0001474!3.77e-27!86;UBERON:0007023!7.33e-26!115;UBERON:0002405!5.30e-24!115;UBERON:0004765!5.83e-21!101;UBERON:0001434!5.83e-21!101;UBERON:0002384!3.91e-13!375;UBERON:0001049!2.54e-07!57;UBERON:0005068!2.54e-07!57;UBERON:0006241!2.54e-07!57;UBERON:0007135!2.54e-07!57;UBERON:0003081!3.03e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.20e-07;114!UBERON:0000178;1.48e-07;15!UBERON:0000179;1.48e-07;15!UBERON:0000463;1.48e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.79e-51,98;UBERON:0003061,7.79e-51,98;UBERON:0002193,9.37e-45,108;UBERON:0002371,1.91e-40,76;UBERON:0002405,1.18e-37,93;UBERON:0001474,5.11e-35,82;UBERON:0004765,5.24e-29,90;UBERON:0007023,2.58e-28,114;UBERON:0001434,1.01e-23,100;UBERON:0003081,2.13e-13,203;UBERON:0002384,2.37e-10,371;UBERON:0000178,1.48e-07,15;UBERON:0000179,1.48e-07,15;UBERON:0000463,1.48e-07,15;UBERON:0002204,3.73e-07,167;UBERON:0001049,5.11e-07,56;UBERON:0005068,5.11e-07,56;UBERON:0006241,5.11e-07,56;UBERON:0007135,5.11e-07,56 | |||
|phase1_expression=0.908391896352783,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,4.03395087871065,0,0,0,0,0,0,0,0,0.125542639594803,1.29902789771517,1.55991119954897,1.25937250101887,229.72473767976,172.339399745649,249.873223032147,0,0,0,1.78174561334694,0.426507697462265,22.0200329501135,258.161860375855,295.401971123519,243.703207813902,96.2836539231675,96.8442061396749,124.151423599678,414.821175238098,277.738818611275,304.442996790709,319.822354782222,189.548396378062,170.648210363202,231.592375819331,203.903922397164,136.213764415825,306.134164494117,242.056756343935,219.390908282834,335.071364385836,219.689450796566,153.036692907103,344.344378917265,209.566654680689,232.718713790851,275.755686956095,241.949416695039,188.817564485984,263.509988674754,152.626625441917,141.380650521996,292.704695024106,200.249440673357,165.715088510004,237.922004534914,178.982931089956,142.091611960957,167.736697331682,157.327181974132,146.132075919338,245.325730423945,247.491519402802,320.165368700584,174.712811913385,158.735508404874,163.667081773112,26.3994366691984,22.9378216730095,24.9062591081795,20.9097809057589,10.8106916499723,20.6910878383614,24.4586602930399,15.2648600725658,16.507176104174,23.4894875748376,17.2022952656353,13.2171328579026,25.7833938971507,26.3384084775077,21.244655172294,34.5849471219265,43.3819162888964,91.2838264833102,5.21475626613745,6.15482147455153,7.79306913631645,117.983673841399,54.20748697537,58.7064820646596,73.9294548078493,98.5022248690442,78.4257865786066,62.3219658447932,62.1787540018159,64.3362850331817,0.593146252648242,0.267540828089713,3.1360657141493,120.56114063021,57.0998535466863,48.7950972585335,69.8334349973828,72.6329144658941,76.176764101201,54.1757665335573,48.9369137002762,48.7628988498334,83.7035867900717,98.9728913543991,85.3973116797888,86.6908995866349,124.359691039331,64.5916841317283,2.43806866313962,0.670700859703636,0,0,0,0.144846518960824,0.795285947051099,0,0,0,1.14185221401064,9.49598297358417,0,0,97.6887654900597,98.5574313113852,103.175377362639,24.5645343034502,26.3117658958859,14.8583000531826,0,0,0,0,0,0,0,0,0.71153252537342,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,653.630870482874,841.483173201866,0,0,0,0,0,3.19201543978521,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0.30648779579902,0.45071417671979,0,0.358779271377724,0,0,1.20036438433761,0.103052529238439,0,0.18611685633159,0.506328996723799,0.194874010322397,0.504867548488229,0.0920498986422993,0,1.77504796258307,0.503760491138201,0.169560592310488,0,0,0,2.31750041646231,0.530119073285941,0.580969714347592,0.932949495138334,1.00928340350251,0,4.69348596989448,0.643240938192885,5.52539685409922,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0.8231480226628,0,3.80265104465493,5.89696330006576,6.49868897349544,0.882926198829301,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,105.380878605406,150.230738219391,134.213939546722,0,0,0,0,0,0,26.111151608485,56.879288372544,39.5996700682875,40.6418268635831,54.0317615064906,0,0,0,0,0,0,0,0.784917590417525,0.87192013766656,0.95339771567235,0,3.57656445851882,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.799783929456456,87.5691220616571,83.8769342691651,115.958666715667,0,0,0,0.144781306667579,0.410952645100767,0,95.0482021065111,118.218456121156,115.576380124701,133.733443803498,0,0,0,0.502548796003046,0,1150.47478878287,1358.19302478627,1279.71510549048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,135.019521058245,199.751349958039,156.889509971063,0,0,0,0.248107807818777,1.07423381301644,0.280660094433074,0.384417447767103,1.02341449813341,0,0,0.308419387605311,0.177561725313127,0,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0,4.60445740956463,2.61435451024901,0,0,0,19.2686691781241,0,0,0,0,0,0,0,0.15350367472613,0,0.322260734604821,0,1.61930592090592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0.421258456238981,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,4.957175969596,0,0,0,0,0,0.633322905892992,0.329294892959902,0,0,0,5.3624182042863,0,16.9458841398202,0,0,0,0,260.828071145335,236.272897006994,479.073284413471,256.099158617123,258.746869771216,254.201537987545,201.971757527055,401.321339204901,0,0,0.490080431962063,6.13150477914872,0,0,2.55082036366116,40.1154536579961,56.1110734487834,67.9472200543664,16.8803408942769,37.9076190453169,44.2775277324393,41.8335321713972,57.6459297307154,33.6890637825191,88.3234413070347,69.6208989809114,98.3704809064654,76.6016918805355,99.8532484002488,85.4442732149029,96.9393513346188,50.6055167091284,3.06246791284767,1.23087398947712,15.686429351607,10.6583029759302,5.63948020351398,0,15.9693915406364,0,134.846494975749,0,0,4.75143489332222,0,2.98244294329889,11.253553312841,0,6.9217627175239,0,5.97743964753209,25.4181202288656,0,0,0.123084805461069,0,0.0898683511473268,0,83.3862963469801,6.21453455512682,210.745121265307,1.11136990144637,2.90799823828566,7.6069840492718,3.99227596002388,0,0,8.69999490521752,0,0,0,0,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| ||
|short_description=p1@MYO1F | |short_description=p1@MYO1F | ||
}} | }} |
Latest revision as of 01:12, 25 September 2015
Short description: | p1@MYO1F |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MYO1F_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000338257, NM_012335, uc002mkg.2, uc002mkh.2, uc010xkf.1_5end |
EntrezGene: | MYO1F |
HGNC: | 7600 |
UniProt: | O00160Q4LE34 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.79e-51 | 98 |
blood island | 7.79e-51 | 98 |
hemolymphoid system | 9.37e-45 | 108 |
bone marrow | 1.91e-40 | 76 |
immune system | 1.18e-37 | 93 |
bone element | 5.11e-35 | 82 |
skeletal element | 5.24e-29 | 90 |
adult organism | 2.58e-28 | 114 |
skeletal system | 1.01e-23 | 100 |
lateral plate mesoderm | 2.13e-13 | 203 |
connective tissue | 2.37e-10 | 371 |
blood | 1.48e-07 | 15 |
haemolymphatic fluid | 1.48e-07 | 15 |
organism substance | 1.48e-07 | 15 |
musculoskeletal system | 3.73e-07 | 167 |
neural tube | 5.11e-07 | 56 |
neural rod | 5.11e-07 | 56 |
future spinal cord | 5.11e-07 | 56 |
neural keel | 5.11e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 4.44e-10 | 31 |
leukemia | 7.46e-10 | 39 |
hematologic cancer | 4.57e-09 | 51 |
immune system cancer | 4.57e-09 | 51 |