FFCP PHASE1:Hg19::chr11:94528241..94528266,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:94528241..94528266,+
|short_description=p@chr11:94528241..94528266,+
|description=CAGE_peak_at_chr11:94528241..94528266,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:94528241..94528266,+ | |||
|coexpression_cluster_id=C3212 | |||
|description=CAGE_peak_at_chr11:94528241..94528266,+ | |||
|id=chr11:94528241..94528266,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.79e-30!180;CL:0000680!2.16e-17!57;CL:0000056!2.16e-17!57;CL:0000355!2.16e-17!57;CL:0000359!4.30e-16!32;CL:0000192!6.67e-16!42;CL:0000514!6.67e-16!42;CL:0000187!7.68e-16!54;CL:0000183!2.81e-15!59;CL:0000057!4.26e-15!75;CL:0000393!4.67e-13!60;CL:0000211!4.67e-13!60;CL:0000222!1.24e-10!119;CL:0002494!5.81e-08!16;CL:0002620!1.32e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.97e-20;32!CL:0000192;8.56e-13;43!CL:0002494;4.07e-10;16!CL:0000048;6.16e-10;58!CL:0000134;1.23e-09;55!CL:0000723;5.52e-09;61!CL:0002539;6.74e-08;10!CL:0000569;1.17e-07;4!CL:0000187;1.23e-07;55!CL:0000034;3.72e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.69e-21,32;CL:0000192,6.78e-18,43;CL:0000514,6.78e-18,43;CL:0000680,7.32e-16,58;CL:0000056,7.32e-16,58;CL:0000355,7.32e-16,58;CL:0000187,1.71e-14,55;CL:0000393,3.12e-12,61;CL:0000211,3.12e-12,61;CL:0002494,4.77e-10,16;CL:0000048,1.25e-09,427;CL:0000723,3.70e-09,433;CL:0000034,1.48e-08,441;CL:0002539,4.05e-08,10;CL:0000222,4.91e-08,121;CL:0000569,1.28e-07,4;CL:0000011,1.28e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000514;8.56e-13;43!CL:0000011;1.17e-07;4!CL:0000355;1.78e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!5.20e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;5.39e-14;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.94e-14,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001637;4.49e-18;42!UBERON:0003509;4.49e-18;42!UBERON:0004572;4.49e-18;42!UBERON:0004573;6.69e-17;33!UBERON:0004571;6.69e-17;33!UBERON:0000947;7.60e-10;21!UBERON:0010191;7.60e-10;21!UBERON:0002049;1.16e-09;75!UBERON:0007798;1.16e-09;75!UBERON:0007500;1.00e-08;56!UBERON:0001981;1.00e-08;56!UBERON:0004537;1.00e-08;56!UBERON:0006876;1.13e-08;11!UBERON:0000992;1.69e-08;13!UBERON:0002118;3.50e-08;5!UBERON:0004237;6.74e-08;10!UBERON:0004695;6.74e-08;10!UBERON:0002111;6.74e-08;10!UBERON:0004178;6.74e-08;10!UBERON:0002119;9.68e-07;4 | |||
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| ||
|short_description=p@chr11:94528241..94528266,+ | |||
}} | }} |
Latest revision as of 03:40, 24 July 2015
Short description: | p@chr11:94528241..94528266, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:94528241..94528266, + |
Coexpression cluster: | C3212_Meningeal_mesenchymal_Fibroblast_alveolar_Smooth_Chondrocyte_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.69e-21 | 32 |
smooth muscle cell | 6.78e-18 | 43 |
smooth muscle myoblast | 6.78e-18 | 43 |
muscle precursor cell | 7.32e-16 | 58 |
myoblast | 7.32e-16 | 58 |
multi-potent skeletal muscle stem cell | 7.32e-16 | 58 |
muscle cell | 1.71e-14 | 55 |
electrically responsive cell | 3.12e-12 | 61 |
electrically active cell | 3.12e-12 | 61 |
cardiocyte | 4.77e-10 | 16 |
multi fate stem cell | 1.25e-09 | 427 |
somatic stem cell | 3.70e-09 | 433 |
stem cell | 1.48e-08 | 441 |
aortic smooth muscle cell | 4.05e-08 | 10 |
mesodermal cell | 4.91e-08 | 121 |
cardiac mesenchymal cell | 1.28e-07 | 4 |
migratory trunk neural crest cell | 1.28e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.94e-14 | 14 |