FFCP PHASE1:Hg19::chr17:79791135..79791175,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=348262 | |EntrezGene=348262 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28007 | |HGNC=28007 | ||
|TSSclassifier=strong | |||
|UniProt=C9JLW8 | |UniProt=C9JLW8 | ||
|association_with_transcript=0bp_to_ENST00000455127,ENST00000538396,NM_001093767,NM_207368,uc002kjd.2,uc010wuy.1,uc010wuz.1_5end | |association_with_transcript=0bp_to_ENST00000455127,ENST00000538396,NM_001093767,NM_207368,uc002kjd.2,uc010wuy.1,uc010wuz.1_5end | ||
|cluster_id=chr17:79791135..79791175,- | |||
|coexpression_cluster_id=C1437 | |||
|description=CAGE_peak_1_at_FAM195B_5end | |description=CAGE_peak_1_at_FAM195B_5end | ||
|id=chr17:79791135..79791175,- | |id=chr17:79791135..79791175,- | ||
|ontology_enrichment_celltype=CL:0000055!1.68e-23!180;CL:0000222!6.31e-19!119;CL:0000183!3.83e-18!59;CL:0000393!5.59e-17!60;CL:0000211!5.59e-17!60;CL:0000187!8.16e-16!54;CL:0000680!8.68e-16!57;CL:0000056!8.68e-16!57;CL:0000355!8.68e-16!57;CL:0000192!5.43e-14!42;CL:0000514!5.43e-14!42;CL:0000220!5.45e-13!246;CL:0002321!8.25e-13!248;CL:0000359!1.81e-12!32;CL:0002078!1.67e-08!44;CL:0000115!1.91e-08!35 | |ontology_enrichment_celltype=CL:0000055!1.68e-23!180;CL:0000222!6.31e-19!119;CL:0000183!3.83e-18!59;CL:0000393!5.59e-17!60;CL:0000211!5.59e-17!60;CL:0000187!8.16e-16!54;CL:0000680!8.68e-16!57;CL:0000056!8.68e-16!57;CL:0000355!8.68e-16!57;CL:0000192!5.43e-14!42;CL:0000514!5.43e-14!42;CL:0000220!5.45e-13!246;CL:0002321!8.25e-13!248;CL:0000359!1.81e-12!32;CL:0002078!1.67e-08!44;CL:0000115!1.91e-08!35 | ||
|ontology_enrichment_celltype_v019=CL:0000359;8.22e-12;32!CL:0000192;1.04e-10;43!CL:0000393;2.82e-09;61!CL:0000211;2.82e-09;61!CL:0000187;4.48e-09;55!CL:0000115;2.06e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.38e-19,121;CL:0000393,1.81e-17,61;CL:0000211,1.81e-17,61;CL:0000187,2.65e-16,55;CL:0000680,2.85e-16,58;CL:0000056,2.85e-16,58;CL:0000355,2.85e-16,58;CL:0000192,1.75e-14,43;CL:0000514,1.75e-14,43;CL:0002321,2.60e-13,250;CL:0000359,1.81e-12,32;CL:0002078,1.08e-08,45;CL:0000115,1.24e-08,36 | |||
|ontology_enrichment_development_v019=CL:0000514;1.04e-10;43!CL:0000355;5.01e-09;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.78e-19!79;UBERON:0007798!1.78e-19!79;UBERON:0004872!4.62e-18!84;UBERON:0003914!4.68e-16!118;UBERON:0000914!8.86e-16!83;UBERON:0002329!8.86e-16!83;UBERON:0003077!8.86e-16!83;UBERON:0003059!8.86e-16!83;UBERON:0007282!8.86e-16!83;UBERON:0009618!8.86e-16!83;UBERON:0007285!8.86e-16!83;UBERON:0004290!1.28e-15!70;UBERON:0000055!1.47e-15!69;UBERON:0000119!2.16e-15!312;UBERON:0000483!3.32e-15!309;UBERON:0001981!5.61e-15!60;UBERON:0007500!5.61e-15!60;UBERON:0004537!5.61e-15!60;UBERON:0006965!5.61e-15!60;UBERON:0001009!1.05e-14!113;UBERON:0000486!1.55e-14!82;UBERON:0001134!4.11e-14!61;UBERON:0002036!4.11e-14!61;UBERON:0003082!4.11e-14!61;UBERON:0004535!4.29e-14!110;UBERON:0005256!6.34e-14!143;UBERON:0002385!2.89e-13!63;UBERON:0001015!2.89e-13!63;UBERON:0000383!2.89e-13!63;UBERON:0000025!3.03e-12!194;UBERON:0001637!1.06e-11!42;UBERON:0003509!1.06e-11!42;UBERON:0004572!1.06e-11!42;UBERON:0000468!1.30e-11!659;UBERON:0000475!2.21e-11!365;UBERON:0000490!1.33e-10!138;UBERON:0000477!9.22e-10!286;UBERON:0004111!9.95e-10!241;UBERON:0000922!5.87e-09!612;UBERON:0002050!1.20e-08!605;UBERON:0005423!1.20e-08!605;UBERON:0000923!1.37e-08!604;UBERON:0005291!1.37e-08!604;UBERON:0006598!1.37e-08!604;UBERON:0002532!1.37e-08!604;UBERON:0000467!1.53e-08!625;UBERON:0004573!1.63e-08!33;UBERON:0004571!1.63e-08!33;UBERON:0000480!2.29e-08!626;UBERON:0002100!5.45e-08!216;UBERON:0000481!8.23e-08!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002049;9.55e-09;75!UBERON:0007798;9.55e-09;75!UBERON:0003914;2.06e-08;74!UBERON:0001637;2.91e-08;42!UBERON:0003509;2.91e-08;42!UBERON:0004572;2.91e-08;42!UBERON:0007500;3.17e-08;56!UBERON:0001981;3.17e-08;56!UBERON:0004537;3.17e-08;56!UBERON:0004573;9.00e-08;33!UBERON:0004571;9.00e-08;33!UBERON:0000055;2.80e-07;65 | |||
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| ||
|short_description=p1@FAM195B | |short_description=p1@FAM195B | ||
}} | }} |
Latest revision as of 08:21, 18 September 2015
Short description: | p1@FAM195B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM195B_5end |
Coexpression cluster: | C1437_Mesenchymal_Osteoblast_Renal_Pericytes_Placental_Fibroblast_Nucleus |
Association with transcript: | 0bp_to_ENST00000455127, ENST00000538396, NM_001093767, NM_207368, uc002kjd.2, uc010wuy.1, uc010wuz.1_5end |
EntrezGene: | FAM195B |
HGNC: | 28007 |
UniProt: | C9JLW8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.38e-19 | 121 |
electrically responsive cell | 1.81e-17 | 61 |
electrically active cell | 1.81e-17 | 61 |
muscle cell | 2.65e-16 | 55 |
muscle precursor cell | 2.85e-16 | 58 |
myoblast | 2.85e-16 | 58 |
multi-potent skeletal muscle stem cell | 2.85e-16 | 58 |
smooth muscle cell | 1.75e-14 | 43 |
smooth muscle myoblast | 1.75e-14 | 43 |
embryonic cell | 2.60e-13 | 250 |
vascular associated smooth muscle cell | 1.81e-12 | 32 |
meso-epithelial cell | 1.08e-08 | 45 |
endothelial cell | 1.24e-08 | 36 |