FFCP PHASE1:Hg19::chr12:112037306..112037404,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:112037306..112037404,-
|short_description=p3@ATXN2
|description=CAGE_peak_3_at_ATXN2_5end
|association_with_transcript=72bp_to_ENST00000535949,ENST0000054...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6311 | |EntrezGene=6311 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10555 | |HGNC=10555 | ||
|TSSclassifier=strong | |||
|UniProt=Q24JQ7,F8VQP2 | |UniProt=Q24JQ7,F8VQP2 | ||
|association_with_transcript=72bp_to_ENST00000535949,ENST00000542287,uc001tsh.2,uc001tsi.2_5end | |||
|cluster_id=chr12:112037306..112037404,- | |||
|description=CAGE_peak_3_at_ATXN2_5end | |||
|id=chr12:112037306..112037404,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!7.10e-25!86;UBERON:0000073!8.69e-25!94;UBERON:0001016!8.69e-25!94;UBERON:0003075!1.23e-24!86;UBERON:0007284!1.23e-24!86;UBERON:0001049!1.86e-24!57;UBERON:0005068!1.86e-24!57;UBERON:0006241!1.86e-24!57;UBERON:0007135!1.86e-24!57;UBERON:0001017!3.17e-24!82;UBERON:0002346!1.50e-23!90;UBERON:0002616!2.45e-22!59;UBERON:0003056!2.74e-21!61;UBERON:0000955!4.36e-21!69;UBERON:0006238!4.36e-21!69;UBERON:0003080!2.58e-20!42;UBERON:0000119!5.38e-20!312;UBERON:0002780!9.18e-20!41;UBERON:0001890!9.18e-20!41;UBERON:0006240!9.18e-20!41;UBERON:0000483!1.07e-19!309;UBERON:0001893!3.93e-18!34;UBERON:0002020!7.91e-18!34;UBERON:0003528!7.91e-18!34;UBERON:0001869!9.06e-18!32;UBERON:0002791!1.58e-17!33;UBERON:0000025!1.79e-17!194;UBERON:0000475!5.01e-17!365;UBERON:0000477!1.38e-15!286;UBERON:0000033!3.51e-15!123;UBERON:0000956!5.68e-15!25;UBERON:0000203!5.68e-15!25;UBERON:0000153!6.12e-15!129;UBERON:0007811!6.12e-15!129;UBERON:0004111!6.39e-15!241;UBERON:0004121!8.62e-15!169;UBERON:0000924!1.88e-14!173;UBERON:0006601!1.88e-14!173;UBERON:0002619!6.15e-14!22;UBERON:0001950!9.92e-13!20;UBERON:0000481!4.06e-12!347;UBERON:0000064!2.82e-10!219;UBERON:0007023!1.14e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.98e-17;32!UBERON:0001893;8.11e-17;34!UBERON:0002791;1.15e-16;32!UBERON:0003528;1.33e-16;34!UBERON:0002020;1.33e-16;34!UBERON:0000956;1.09e-15;25!UBERON:0000203;1.09e-15;25!UBERON:0002780;1.57e-15;41!UBERON:0001890;1.57e-15;41!UBERON:0002619;1.11e-14;22!UBERON:0000073;2.27e-13;53!UBERON:0002616;2.27e-13;53!UBERON:0001950;2.30e-13;20!UBERON:0000955;6.95e-10;68!UBERON:0001017;3.64e-09;75!UBERON:0001016;8.71e-09;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.80e-24,56;UBERON:0005068,1.80e-24,56;UBERON:0006241,1.80e-24,56;UBERON:0007135,1.80e-24,56;UBERON:0001017,5.34e-24,81;UBERON:0003075,5.60e-24,82;UBERON:0007284,5.60e-24,82;UBERON:0001016,1.11e-23,89;UBERON:0000073,4.79e-23,53;UBERON:0002616,4.79e-23,53;UBERON:0002346,1.16e-22,86;UBERON:0000955,8.95e-21,68;UBERON:0006238,8.95e-21,68;UBERON:0003056,2.05e-20,61;UBERON:0002780,2.69e-20,41;UBERON:0001890,2.69e-20,41;UBERON:0003080,2.69e-20,41;UBERON:0006240,2.69e-20,41;UBERON:0000119,8.18e-19,309;UBERON:0001893,1.29e-18,34;UBERON:0000483,1.62e-18,306;UBERON:0003528,2.65e-18,34;UBERON:0002020,2.65e-18,34;UBERON:0001869,3.04e-18,32;UBERON:0000025,1.18e-17,192;UBERON:0002791,1.34e-17,32;UBERON:0010314,5.60e-17,132;UBERON:0010371,3.88e-16,104;UBERON:0000956,2.30e-15,25;UBERON:0000203,2.30e-15,25;UBERON:0004111,6.51e-15,240;UBERON:0002619,2.67e-14,22;UBERON:0001950,4.68e-13,20;UBERON:0004121,6.55e-13,171;UBERON:0000924,6.55e-13,171;UBERON:0006601,6.55e-13,171;UBERON:0011216,2.00e-09,223;UBERON:0007023,5.62e-09,114 | |||
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| ||
|short_description=p3@ATXN2 | |||
}} | }} |
Latest revision as of 10:13, 16 September 2015
Short description: | p3@ATXN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ATXN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 72bp_to_ENST00000535949, ENST00000542287, uc001tsh.2, uc001tsi.2_5end |
EntrezGene: | ATXN2 |
HGNC: | 10555 |
UniProt: | Q24JQ7F8VQP2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data