FFCP PHASE1:Hg19::chr19:12444399..12444415,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=147837 | |EntrezGene=147837 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30498 | |HGNC=30498 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TA94 | |UniProt=Q8TA94 | ||
|association_with_transcript=86bp_to_ENST00000293725_5end | |association_with_transcript=86bp_to_ENST00000293725_5end | ||
|cluster_id=chr19:12444399..12444415,- | |||
|description=CAGE_peak_5_at_ZNF563_5end | |description=CAGE_peak_5_at_ZNF563_5end | ||
|id=chr19:12444399..12444415,- | |id=chr19:12444399..12444415,- | ||
|ontology_enrichment_celltype=CL:0000791!7.23e-08!18;CL:0000789!7.23e-08!18;CL:0002420!7.23e-08!18;CL:0002419!7.23e-08!18;CL:0000790!7.23e-08!18;CL:0000542!3.21e-07!53;CL:0000051!3.21e-07!53;CL:0000838!3.48e-07!52;CL:0000625!8.34e-07!11 | |ontology_enrichment_celltype=CL:0000791!7.23e-08!18;CL:0000789!7.23e-08!18;CL:0002420!7.23e-08!18;CL:0002419!7.23e-08!18;CL:0000790!7.23e-08!18;CL:0000542!3.21e-07!53;CL:0000051!3.21e-07!53;CL:0000838!3.48e-07!52;CL:0000625!8.34e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.08e-21;18!CL:0000789;3.08e-21;18!CL:0002419;3.08e-21;18!CL:0000625;3.77e-16;11!CL:0000084;1.69e-14;25!CL:0000624;3.69e-08;6!CL:0000542;9.71e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.47e-21,18;CL:0000789,1.47e-21,18;CL:0002420,1.47e-21,18;CL:0002419,1.47e-21,18;CL:0000790,1.47e-21,18;CL:0000625,2.75e-16,11;CL:0000084,1.01e-14,25;CL:0000827,1.01e-14,25;CL:0000838,4.59e-12,52;CL:0000542,9.29e-12,53;CL:0000051,9.29e-12,53;CL:0000624,2.33e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000790;3.08e-21;18!CL:0000051;9.71e-08;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.85e-14!115;UBERON:0002780!3.26e-13!41;UBERON:0001890!3.26e-13!41;UBERON:0006240!3.26e-13!41;UBERON:0003080!1.57e-12!42;UBERON:0001893!2.24e-12!34;UBERON:0002020!2.30e-12!34;UBERON:0003528!2.30e-12!34;UBERON:0001869!5.33e-12!32;UBERON:0002791!7.94e-12!33;UBERON:0001049!1.13e-11!57;UBERON:0005068!1.13e-11!57;UBERON:0006241!1.13e-11!57;UBERON:0007135!1.13e-11!57;UBERON:0002616!2.06e-11!59;UBERON:0000955!3.41e-09!69;UBERON:0006238!3.41e-09!69;UBERON:0002619!3.84e-09!22;UBERON:0000956!1.36e-08!25;UBERON:0000203!1.36e-08!25;UBERON:0001950!6.65e-08!20;UBERON:0001017!7.04e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.09e-09;32!UBERON:0001893;2.33e-08;34!UBERON:0002780;2.58e-08;41!UBERON:0001890;2.58e-08;41!UBERON:0002791;6.54e-08;32!UBERON:0000369;9.66e-08;4!UBERON:0002435;9.66e-08;4!UBERON:0000204;9.66e-08;4!UBERON:0003528;1.08e-07;34!UBERON:0002020;1.08e-07;34!UBERON:0009663;2.92e-07;7!UBERON:0001905;3.66e-07;2!UBERON:0002757;3.66e-07;2!UBERON:0010134;3.66e-07;2!UBERON:0005408;3.66e-07;2!UBERON:0001899;3.66e-07;2!UBERON:0002370;9.78e-07;2!UBERON:0001954;9.78e-07;2!UBERON:0005058;9.78e-07;2!UBERON:0003022;9.78e-07;2!UBERON:0002421;9.78e-07;2!UBERON:0002600;9.78e-07;2!UBERON:0009113;9.78e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,1.98e-10,41;UBERON:0001890,1.98e-10,41;UBERON:0003080,1.98e-10,41;UBERON:0006240,1.98e-10,41;UBERON:0001869,4.92e-10,32;UBERON:0001893,2.60e-09,34;UBERON:0002791,1.87e-08,32;UBERON:0003528,7.67e-08,34;UBERON:0002020,7.67e-08,34;UBERON:0000369,1.09e-07,4;UBERON:0002435,1.09e-07,4;UBERON:0000204,1.09e-07,4;UBERON:0010082,1.09e-07,4;UBERON:0002370,1.45e-07,4;UBERON:0005058,1.45e-07,4;UBERON:0009113,1.45e-07,4;UBERON:0003295,1.45e-07,4;UBERON:0005562,1.45e-07,4;UBERON:0001905,2.01e-07,2;UBERON:0002757,2.01e-07,2;UBERON:0010134,2.01e-07,2;UBERON:0005408,2.01e-07,2;UBERON:0001899,2.01e-07,2;UBERON:0000073,2.05e-07,53;UBERON:0002616,2.05e-07,53;UBERON:0009663,3.76e-07,7;UBERON:0001954,6.97e-07,2;UBERON:0003022,6.97e-07,2;UBERON:0002421,6.97e-07,2;UBERON:0002600,6.97e-07,2;UBERON:0001049,7.23e-07,56;UBERON:0005068,7.23e-07,56;UBERON:0006241,7.23e-07,56;UBERON:0007135,7.23e-07,56 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.704772020479856,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0.572471974262113,0,0.125542639594803,0.305653622991805,0.164201178899891,0.236132343941038,0,0,0.154816123316076,0,0,0,0.852139206383318,0.142169232487422,0,0,0.200544447470142,0.217010870715852,0,0.647787332037959,0.257575567634187,0.145398238779565,0.377875943688809,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0.112328631146495,0,0,0,0,0,0,1.09227722252426,0,1.70692089026603,1.20118796110804,0,0,0.954053754535364,0.569212969109448,0.587237189370939,0,0,0.560508562981536,0,1.57367816091066,1.17903228824749,0.411202997999018,1.67186495390678,2.28145586643513,7.57516489175573,1.94826728407911,0.222820913770347,0,1.77227115666897,0.812411591295047,0.512365278902701,0.650296737799391,0.657751618414705,0.276350017785848,0.579606171470105,3.70716407905151,2.94294910898684,0,0.339928028092699,1.91610246800961,1.37450978193052,0.506039384039006,1.91139248594458,1.30216690771284,1.90090408889675,1.05402583354441,2.43174561193395,1.24930726552346,1.18388626022008,0.821127996921047,0.604820229674197,0,2.02754165435919,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0.289693037921647,0,0,0.0945348171640679,0.221729397462564,0,0.458426764241994,0,0,0.97364218096405,1.39303789839414,0.531831842075461,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.379891534993739,0.264818361626438,0,0.354668382198357,0.560677600142307,0,0,0.311211035399766,0,0.326923806226917,0,0,0,0,0,0,0.23486899728753,0,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0.179389635688862,0.213557388818567,0.211931901159562,0,0.103052529238439,0,0,1.0126579934476,0.292311015483596,1.26216887122057,0.460249493211497,0.323292113637624,0.355009592516614,0.201504196455281,0.169560592310488,0.386521706326594,0.272746120590835,1.14721838155602,0,0,0,0.10366105501537,0.252320850875628,0,0,1.28648187638577,0,0,0,0,0,0,0.220587945464788,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.614942192715568,0,0.98775256867763,0,0.502644862058154,0.462942225792648,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0,0.234004265139238,0.297262324577456,0,0.503946384596579,0.992425680696705,0.268675568108545,0,0,0,0.44024217006613,0.414656231081544,0.432359860250884,0.6312121671319,0.063497894292169,0,0,0,0.308482478109971,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,1.20575750823834,0.871533458600294,0.899756920638513,0,0,0,0,0,0,0.144781306667579,0,0.358121926479791,0,0.788123040807709,1.07813787429759,0.898401253958239,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.623912584592421,0,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0,0,0.620304078368662,0.431428401637234,0.106727557803444,0,0,0.30239029332968,0,0.61384789315225,0.280660094433074,0.128139149255701,1.02341449813341,0.482561763430822,0,0.308419387605311,0,0,0.519254429183621,0.116210378459959,0.241718899183244,0.200506470303285,0.460404944679482,0.229628896329213,0,0.524497659837696,0,0.0770153371044148,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0.438519753291869,0.261435451024901,0.256450125116389,0,0,1.23649213977267,0.0915694648183434,0.330037999682352,0,0,0,0.096670718292122,0,0,0.137836572484531,0.322260734604821,0.145016693914229,0.0852266274161009,0.0890320356467374,0.330569830721956,0,0.127612712494584,0.30347334256665,0,0.31481234683064,0.6970372701606,0.308033580176089,0,0,0.18532421910392,0.572499546967965,0,0.632758849437452,0.190630193923825,0,0,0,0,0,0,0,0.404364963146632,1.58510321173008,0,0,0.243713489631284,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0.0982490410131212,0.35667105148125,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0.847294206991012,0,0,0,0.918893600827838,0,0,0.569647187174163,1.42939065274673,1.23408681925858,0,0,1.58625035258854,0,0,0.735120647943095,0.185803175125719,0.28853842595289,0.782560276832555,0,0,0.191505370132367,0,0.324621940274555,0,0.228234679033192,0,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0.748562161632879,0.293016358543788,0,0.222886768554957,0,1.19372242368845,0.296964680832639,0.614321404198464,0.994147647766298,0.984685914873589,0.333926115068718,0,0,0,0.828851746593443,0,0.409074730008619,0.369254416383208,1.24415835064723,0,0,0,0.0986434056369336,0,1.11136990144637,0,0.649376687132959,0,0.260427761085233,0,0,0.1137934482855,0,0.236387681767936,0,0.291604613383254,0,0.885741385813839,2.89431452700979,0,0.442317039724898,0.295547618953547,1.31631238292384,0,0.697118721393016,0.153900517007594,0.113942055847001,0.23056390438806,0,0.108647371922008,0.638002319463839,0.274792780205587,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0.326465616318295,0.424059214301822,0,0.995261931078505,0.353830258013357,1.22206028986725,4.74433805888995,0.98851151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| ||
|short_description=p5@ZNF563 | |short_description=p5@ZNF563 | ||
}} | }} |
Latest revision as of 07:33, 25 September 2015
Short description: | p5@ZNF563 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ZNF563_5end |
Coexpression cluster: | NA |
Association with transcript: | 86bp_to_ENST00000293725_5end |
EntrezGene: | ZNF563 |
HGNC: | 30498 |
UniProt: | Q8TA94 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.47e-21 | 18 |
alpha-beta T cell | 1.47e-21 | 18 |
immature T cell | 1.47e-21 | 18 |
mature T cell | 1.47e-21 | 18 |
immature alpha-beta T cell | 1.47e-21 | 18 |
CD8-positive, alpha-beta T cell | 2.75e-16 | 11 |
T cell | 1.01e-14 | 25 |
pro-T cell | 1.01e-14 | 25 |
lymphoid lineage restricted progenitor cell | 4.59e-12 | 52 |
lymphocyte | 9.29e-12 | 53 |
common lymphoid progenitor | 9.29e-12 | 53 |
CD4-positive, alpha-beta T cell | 2.33e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
regional part of forebrain | 1.98e-10 | 41 |
forebrain | 1.98e-10 | 41 |
anterior neural tube | 1.98e-10 | 41 |
future forebrain | 1.98e-10 | 41 |
cerebral hemisphere | 4.92e-10 | 32 |
telencephalon | 2.60e-09 | 34 |
regional part of telencephalon | 1.87e-08 | 32 |
brain grey matter | 7.67e-08 | 34 |
gray matter | 7.67e-08 | 34 |
corpus striatum | 1.09e-07 | 4 |
striatum | 1.09e-07 | 4 |
ventral part of telencephalon | 1.09e-07 | 4 |
future corpus striatum | 1.09e-07 | 4 |
thymus | 1.45e-07 | 4 |
hemolymphoid system gland | 1.45e-07 | 4 |
thymic region | 1.45e-07 | 4 |
pharyngeal gland | 1.45e-07 | 4 |
thymus primordium | 1.45e-07 | 4 |
pineal body | 2.01e-07 | 2 |
regional part of epithalamus | 2.01e-07 | 2 |
secretory circumventricular organ | 2.01e-07 | 2 |
circumventricular organ | 2.01e-07 | 2 |
epithalamus | 2.01e-07 | 2 |
regional part of nervous system | 2.05e-07 | 53 |
regional part of brain | 2.05e-07 | 53 |
telencephalic nucleus | 3.76e-07 | 7 |
Ammon's horn | 6.97e-07 | 2 |
lobe parts of cerebral cortex | 6.97e-07 | 2 |
hippocampal formation | 6.97e-07 | 2 |
limbic lobe | 6.97e-07 | 2 |
neural tube | 7.23e-07 | 56 |
neural rod | 7.23e-07 | 56 |
future spinal cord | 7.23e-07 | 56 |
neural keel | 7.23e-07 | 56 |