FFCP PHASE1:Hg19::chr12:124873357..124873401,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:124873357..124873401,-
|short_description=p1@NCOR2
|description=CAGE_peak_1_at_NCOR2_5end
|association_with_transcript=0bp_to_ENST00000448614_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9612 | |EntrezGene=9612 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7673 | |HGNC=7673 | ||
|TSSclassifier=strong | |||
|UniProt=C9JNV9 | |UniProt=C9JNV9 | ||
|association_with_transcript=0bp_to_ENST00000448614_5end | |||
|cluster_id=chr12:124873357..124873401,- | |||
|coexpression_cluster_id=C2195 | |||
|description=CAGE_peak_1_at_NCOR2_5end | |||
|id=chr12:124873357..124873401,- | |||
|ontology_enrichment_celltype=CL:0000055!1.31e-19!180;CL:0000222!2.44e-18!119;CL:0000183!1.60e-12!59;CL:0000359!1.93e-12!32;CL:0000192!2.85e-12!42;CL:0000514!2.85e-12!42;CL:0000057!3.65e-12!75;CL:0000680!1.44e-11!57;CL:0000056!1.44e-11!57;CL:0000355!1.44e-11!57;CL:0000187!5.22e-11!54;CL:0000077!5.64e-08!19;CL:0000393!6.75e-08!60;CL:0000211!6.75e-08!60;CL:0002620!5.80e-07!23;CL:0000213!9.61e-07!57;CL:0000215!9.61e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.05e-12;32!CL:0000192;2.98e-09;43!CL:0000077;5.09e-08;19!CL:0002620;4.92e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.14e-18,121;CL:0000359,1.46e-12,32;CL:0000057,1.48e-12,76;CL:0000192,4.75e-12,43;CL:0000514,4.75e-12,43;CL:0000680,1.98e-11,58;CL:0000056,1.98e-11,58;CL:0000355,1.98e-11,58;CL:0000187,7.27e-11,55;CL:0000077,4.79e-08,19;CL:0000393,8.61e-08,61;CL:0000211,8.61e-08,61;CL:0002620,5.05e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;2.98e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.59e-18!365;UBERON:0001637!1.34e-17!42;UBERON:0003509!1.34e-17!42;UBERON:0004572!1.34e-17!42;UBERON:0000468!3.30e-17!659;UBERON:0000467!5.16e-17!625;UBERON:0000480!1.13e-16!626;UBERON:0000119!6.57e-15!312;UBERON:0003914!1.79e-14!118;UBERON:0001981!2.85e-14!60;UBERON:0007500!2.85e-14!60;UBERON:0004537!2.85e-14!60;UBERON:0006965!2.85e-14!60;UBERON:0000483!4.53e-14!309;UBERON:0000025!5.91e-14!194;UBERON:0004573!6.07e-14!33;UBERON:0004571!6.07e-14!33;UBERON:0002049!1.02e-13!79;UBERON:0007798!1.02e-13!79;UBERON:0004290!2.57e-13!70;UBERON:0005256!4.88e-13!143;UBERON:0001134!1.50e-12!61;UBERON:0002036!1.50e-12!61;UBERON:0003082!1.50e-12!61;UBERON:0004872!1.87e-12!84;UBERON:0000914!3.17e-12!83;UBERON:0002329!3.17e-12!83;UBERON:0003077!3.17e-12!83;UBERON:0003059!3.17e-12!83;UBERON:0007282!3.17e-12!83;UBERON:0009618!3.17e-12!83;UBERON:0007285!3.17e-12!83;UBERON:0002100!3.37e-12!216;UBERON:0002385!5.15e-12!63;UBERON:0001015!5.15e-12!63;UBERON:0000383!5.15e-12!63;UBERON:0000055!6.89e-12!69;UBERON:0000926!1.17e-11!448;UBERON:0004120!1.17e-11!448;UBERON:0006603!1.17e-11!448;UBERON:0004111!1.89e-11!241;UBERON:0000923!4.45e-11!604;UBERON:0005291!4.45e-11!604;UBERON:0006598!4.45e-11!604;UBERON:0002532!4.45e-11!604;UBERON:0000062!5.07e-11!511;UBERON:0002050!5.27e-11!605;UBERON:0005423!5.27e-11!605;UBERON:0000477!5.58e-11!286;UBERON:0000486!2.00e-10!82;UBERON:0003081!3.84e-10!216;UBERON:0000922!5.13e-10!612;UBERON:0000490!5.63e-10!138;UBERON:0000481!7.24e-10!347;UBERON:0002204!5.37e-09!167;UBERON:0000947!5.70e-08!21;UBERON:0010191!5.70e-08!21;UBERON:0001009!8.76e-08!113;UBERON:0004535!9.46e-08!110;UBERON:0003104!1.02e-07!238;UBERON:0009142!1.02e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.99e-13;42!UBERON:0003509;3.99e-13;42!UBERON:0004572;3.99e-13;42!UBERON:0004573;7.78e-13;33!UBERON:0004571;7.78e-13;33!UBERON:0007500;2.68e-08;56!UBERON:0001981;2.68e-08;56!UBERON:0004537;2.68e-08;56!UBERON:0003914;4.29e-08;74!UBERON:0000947;4.90e-08;21!UBERON:0010191;4.90e-08;21 | |||
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| ||
|short_description=p1@NCOR2 | |||
}} | }} |
Latest revision as of 03:34, 17 September 2015
Short description: | p1@NCOR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NCOR2_5end |
Coexpression cluster: | C2195_liposarcoma_Smooth_Fibroblast_CD14_giant_Hepatic_mesothelioma |
Association with transcript: | 0bp_to_ENST00000448614_5end |
EntrezGene: | NCOR2 |
HGNC: | 7673 |
UniProt: | C9JNV9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.14e-18 | 121 |
vascular associated smooth muscle cell | 1.46e-12 | 32 |
fibroblast | 1.48e-12 | 76 |
smooth muscle cell | 4.75e-12 | 43 |
smooth muscle myoblast | 4.75e-12 | 43 |
muscle precursor cell | 1.98e-11 | 58 |
myoblast | 1.98e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.98e-11 | 58 |
muscle cell | 7.27e-11 | 55 |
mesothelial cell | 4.79e-08 | 19 |
electrically responsive cell | 8.61e-08 | 61 |
electrically active cell | 8.61e-08 | 61 |
skin fibroblast | 5.05e-07 | 23 |