FFCP PHASE1:Hg19::chr1:1535369..1535429,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=643988 | |EntrezGene=643988 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=F2Z333 | |UniProt=F2Z333 | ||
|association_with_transcript=46bp_to_ENST00000422725,NM_001242659_5end | |association_with_transcript=46bp_to_ENST00000422725,NM_001242659_5end | ||
|cluster_id=chr1:1535369..1535429,- | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_2_at_LOC643988_5end | |description=CAGE_peak_2_at_LOC643988_5end | ||
|id=chr1:1535369..1535429,- | |id=chr1:1535369..1535429,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000148;3.33e-09;10!CL:0002567;5.47e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,3.41e-09,10;CL:0000541,3.41e-09,10;CL:0002567,5.61e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.37e-11!57;UBERON:0005068!6.37e-11!57;UBERON:0006241!6.37e-11!57;UBERON:0007135!6.37e-11!57;UBERON:0003075!6.09e-09!86;UBERON:0007284!6.09e-09!86;UBERON:0002020!1.90e-08!34;UBERON:0003528!1.90e-08!34;UBERON:0001950!2.86e-08!20;UBERON:0001893!3.01e-08!34;UBERON:0002616!4.08e-08!59;UBERON:0002346!4.85e-08!90;UBERON:0002780!5.28e-08!41;UBERON:0001890!5.28e-08!41;UBERON:0006240!5.28e-08!41;UBERON:0001869!7.75e-08!32;UBERON:0002619!1.00e-07!22;UBERON:0002791!1.08e-07!33;UBERON:0003080!1.70e-07!42;UBERON:0005743!1.74e-07!86;UBERON:0000955!1.85e-07!69;UBERON:0006238!1.85e-07!69;UBERON:0007023!2.00e-07!115;UBERON:0001017!6.96e-07!82;UBERON:0000073!8.93e-07!94;UBERON:0001016!8.93e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.28e-17;20!UBERON:0002619;1.15e-15;22!UBERON:0001869;3.61e-14;32!UBERON:0003528;3.89e-14;34!UBERON:0002020;3.89e-14;34!UBERON:0001893;1.70e-13;34!UBERON:0000956;2.61e-13;25!UBERON:0000203;2.61e-13;25!UBERON:0002791;1.25e-12;32!UBERON:0000073;1.06e-11;53!UBERON:0002616;1.06e-11;53!UBERON:0002298;6.37e-11;6!UBERON:0000200;6.65e-10;6!UBERON:0001017;1.13e-09;75!UBERON:0002780;1.65e-09;41!UBERON:0001890;1.65e-09;41!UBERON:0004732;3.02e-09;13!UBERON:0000955;4.12e-09;68!UBERON:0004733;3.45e-08;12!UBERON:0002028;3.45e-08;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,9.78e-23,56;UBERON:0005068,9.78e-23,56;UBERON:0006241,9.78e-23,56;UBERON:0007135,9.78e-23,56;UBERON:0000073,4.32e-21,53;UBERON:0002616,4.32e-21,53;UBERON:0001017,3.01e-18,81;UBERON:0000955,3.56e-18,68;UBERON:0006238,3.56e-18,68;UBERON:0003075,6.02e-18,82;UBERON:0007284,6.02e-18,82;UBERON:0001950,7.92e-18,20;UBERON:0003528,1.02e-16,34;UBERON:0002020,1.02e-16,34;UBERON:0002346,1.32e-16,86;UBERON:0001016,2.04e-16,89;UBERON:0001869,3.61e-16,32;UBERON:0002619,7.48e-16,22;UBERON:0010371,7.76e-16,104;UBERON:0001893,6.81e-15,34;UBERON:0002780,2.64e-14,41;UBERON:0001890,2.64e-14,41;UBERON:0003080,2.64e-14,41;UBERON:0006240,2.64e-14,41;UBERON:0002791,3.03e-14,32;UBERON:0000956,1.80e-13,25;UBERON:0000203,1.80e-13,25;UBERON:0003056,2.24e-11,61;UBERON:0002298,3.84e-11,6;UBERON:0004121,8.62e-11,171;UBERON:0000924,8.62e-11,171;UBERON:0006601,8.62e-11,171;UBERON:0010314,1.23e-10,132;UBERON:0000200,2.02e-10,6;UBERON:0007023,2.20e-10,114;UBERON:0003076,4.22e-10,15;UBERON:0003057,4.22e-10,15;UBERON:0004732,1.33e-09,13;UBERON:0004733,1.69e-08,12;UBERON:0002028,1.69e-08,12;UBERON:0007277,1.69e-08,12;UBERON:0000025,2.28e-07,192;UBERON:0011216,9.30e-07,223 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,0.446961094427288,0,0,1.26343974685366,0.522371256399677,0,0.697801167972428,0,1.05506791291381,0.123766352960047,0,0,0,0,0,0,0.612002073732759,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0.0774672005803016,0,0.293600439334847,0,0,1.08505435357926,0.895661896959697,0.971680998056939,0.515151135268373,0.436194716338694,0.377875943688809,0.242584061187816,0,0,0,0,0.256160706529101,0.236482229888585,0,1.29096936716765,0,0,0,0.224723484445085,0,0,0,0.659702600373432,0.199463657621632,0,0,0,0,0.502497330513487,0,0,0.605399502633369,0,0,1.26753171787165,0.425208599930087,0.419317291016752,0.336985893439485,0.901061357049038,0.32145117339416,0.570025487482497,0.39783335439818,0.365328307529268,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0.790152254325231,0,0.393010762749165,0,0.668745981562712,0.32592226663359,0,0,0.445641827540694,0,0,0,0.512365278902701,0.520237390239513,0.822189523018381,0.829050053357545,1.15921234294021,0.14828656316206,0,0,0.339928028092699,0,0,0.253019692019503,0,0,0,0.301150238155546,0,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0.255725123687061,1.0843174571537,0,0.434539556882471,0.795285947051099,0.486634870302636,0.0945348171640679,0,0.087834785693126,0.916853528483988,1.09288586487763,0,0.324547393654683,0.348259474598534,1.32957960518865,0,0,0,0.596287222100115,0,0,0,0,0,0,0,0,0.33472061276467,0.402829317109147,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,0,0,1.49091585508596,0.379891534993739,0,0.573673241497627,1.41867352879343,0.560677600142307,1.06748995729705,1.48000529050296,0.311211035399766,0.134710672069688,0.326923806226917,0.302714855289863,0,0,0.936480230490962,0,0.896692083310806,0.117434498643765,0,0,0,0.368502951935304,0.413303124703062,0,0.494533858557114,0,0,0,0.250237039743928,0.277064115484183,0.438977620880838,0.612975591598039,1.05166641234618,0.226864366320042,0,0.427114777637135,0.211931901159562,0.300091096084402,0,0.257640540045629,0.558350568994769,0.168776332241266,0.0974370051611986,0.252433774244115,0.368199594569197,0.161646056818812,0,0,0.847802961552438,0,0.272746120590835,0.573609190778008,0.243947412259191,0,0.116193942869518,0.518305275076852,0,0.72995471815166,0,0.643240938192885,2.76269842704961,0,0,0.473227200159376,1.01150814046861,0.723033089650446,0.772057809126758,1.74303555273925,1.18635309555548,0.674156540800822,0.588664395376038,0,0,0,0.8231480226628,1.47008711385542,0,0,1.18157981336281,0,0.368965315629341,0.171567810298526,0.98775256867763,1.1240175325762,0.100528972411631,0.185176890317059,0.651616610620649,0,0,0,0,0,0,0.190254152234598,3.1608175918371,5.15091697256924,0.984868024349589,0.468008530278475,1.33768046059855,0,0.16798212819886,0,0.268675568108545,0,0.766765358330422,0,2.72950145441001,0.829312462163088,0.720599767084807,1.13618190083742,9.52468414382536,32.0870277468953,31.6487107467127,17.1072446022705,4.31875469353959,10.5120070245371,7.71731368102561,0.224262168690721,0.43596006883328,0.22001485746285,0.258543431515556,0,0,1.59562869950922,1.04007436911366,0,0,0,0.285955987316295,0,0,0,1.06617584622764,0,0,0,1.09970290300263,0,0.502257091432126,0,0,0,0,0.434343920002738,0.821905290201534,0.895304816199478,0,0,0.215627574859517,0.128343036279748,1.01637849688985,0,0,0,0,0.749007023947182,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0.623912584592421,0.356857977594324,0.630809660135739,1.05427273493442,1.50473049863859,0,1.03473071292505,0,0.184369168541703,0.173767228936166,0.195801157462741,0.343143423810856,0.413536052245775,0.215714200818617,0.533637789017222,0.303127571446259,3.32870879020994,0.604780586659361,1.24053903909388,0.153461973288062,0,0.640695746278505,0,0.321707842287215,0,0,0.532685175939381,0.164254312027618,0,0.116210378459959,0.846016147141356,1.20303882181971,0.736647911487171,0.114814448164607,0.364182336013434,0.131124414959424,0,0.15403067420883,0.784349769176855,0,0.105551628892876,1.13733384070897,0,0,0,0.541892875087706,0,0,0,0.223874754722178,0.219259876645935,0,0.256450125116389,0.328014645699706,0.650756789328606,0,1.37354197227515,1.48517099857058,0,0.650060246036521,0,0.193341436584244,0,0,0,0,0,0.255679882248303,0.534192213880424,0,0.192190067365106,0,0.50578890427775,1.39453664789186,1.88887408098384,0.6970372701606,3.38836938193698,1.06461206063404,0,0.55597265731176,0,0,0,0,0.255897791311334,0,1.90921948755562,0,0,0.274537029736055,0,0.808729926293264,0,0,0,0.243713489631284,0,0.545999645631943,0.282810863907425,3.39024349860728,2.2054613741845,0,0.438450885253763,0.578775534266688,1.31178950409327,0.202910376962704,0,0,0.143411352204052,0.0982490410131212,0.7133421029625,0.709522128141196,1.26664581178598,0.658589785919804,0.379473173765715,0,0.0962221127255121,0,0,0,0.43050537267123,0,1.33029046061003,0,0,0.764637207142375,0,0.238231775457789,0.411362273086194,0,0.540031437238115,0,0.213648142254946,0,1.71528151186722,0,0,0,0.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| ||
|short_description=p2@LOC643988 | |short_description=p2@LOC643988 | ||
}} | }} |
Latest revision as of 06:04, 17 September 2015
Short description: | p2@LOC643988 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC643988_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | 46bp_to_ENST00000422725, NM_001242659_5end |
EntrezGene: | LOC643988 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 3.41e-09 | 10 |
melanoblast | 3.41e-09 | 10 |
light melanocyte | 5.61e-07 | 3 |