FFCP PHASE1:Hg19::chr1:205649557..205649575,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85414 | |EntrezGene=85414 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8642 | |HGNC=8642 | ||
|TSSclassifier=strong | |||
|UniProt=Q96JT2 | |UniProt=Q96JT2 | ||
|association_with_transcript=11bp_to_ENST00000367145_5end | |association_with_transcript=11bp_to_ENST00000367145_5end | ||
|cluster_id=chr1:205649557..205649575,- | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_3_at_SLC45A3_5end | |description=CAGE_peak_3_at_SLC45A3_5end | ||
|id=chr1:205649557..205649575,- | |id=chr1:205649557..205649575,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000097;3.97e-28;5!CL:0000163;9.70e-16;9!CL:1000746;2.35e-11;7!CL:1000612;2.35e-11;7!CL:0002188;1.55e-07;5!CL:0002681;8.02e-07;12!CL:0002584;8.02e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.99e-28,5;CL:0002028,3.99e-28,5;CL:0000163,9.74e-16,9;CL:1000746,2.24e-11,7;CL:1000612,2.24e-11,7;CL:0002188,1.46e-07,5;CL:0002681,7.79e-07,12;CL:0002584,7.79e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0003056;5.56e-12;3!UBERON:0005425;1.30e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3347;1.30e-09;1!DOID:8552;1.30e-09;1!DOID:3571;1.30e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8552,6.88e-10,1;DOID:3347,1.25e-09,1;DOID:3571,2.46e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0004111!6.71e-10!241;UBERON:0000025!7.17e-10!194;UBERON:0000119!7.00e-09!312;UBERON:0000483!1.45e-08!309;UBERON:0000477!1.69e-08!286;UBERON:0000073!4.68e-08!94;UBERON:0001016!4.68e-08!94;UBERON:0005743!2.04e-07!86;UBERON:0001049!4.63e-07!57;UBERON:0005068!4.63e-07!57;UBERON:0006241!4.63e-07!57;UBERON:0007135!4.63e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0005162;1.72e-17;2!UBERON:0000122;1.72e-17;2!UBERON:0000074;2.35e-11;7!UBERON:0001229;2.35e-11;7!UBERON:0002336;1.30e-09;1!UBERON:0000941;1.30e-09;1!UBERON:0001785;1.30e-09;1!UBERON:0002464;1.30e-09;1!UBERON:0004904;1.30e-09;1!UBERON:0011215;1.30e-09;1!UBERON:0001018;1.30e-09;1!UBERON:0001021;1.30e-09;1!UBERON:0002473;1.30e-09;1!UBERON:0005340;1.30e-09;1!UBERON:0003544;1.30e-09;1!UBERON:0005970;1.30e-09;1!UBERON:0002316;1.30e-09;1!UBERON:0001020;1.30e-09;1!UBERON:0002437;1.30e-09;1!UBERON:0001225;8.02e-07;12!UBERON:0008987;8.02e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005162,1.73e-17,2;UBERON:0000122,1.73e-17,2;UBERON:0010532,2.24e-11,7;UBERON:0000074,2.24e-11,7;UBERON:0001229,2.24e-11,7;UBERON:0001230,2.24e-11,7;UBERON:0003220,2.24e-11,7;UBERON:0005749,2.24e-11,7;UBERON:0004199,2.24e-11,7;UBERON:0004209,2.24e-11,7;UBERON:0004198,2.24e-11,7;UBERON:0005103,5.10e-10,8;UBERON:0000083,5.10e-10,8;UBERON:0009201,5.10e-10,8;UBERON:0006553,5.10e-10,8;UBERON:0003074,5.10e-10,8;UBERON:0003060,5.10e-10,8;UBERON:0000941,1.06e-09,1;UBERON:0001785,1.06e-09,1;UBERON:0002464,1.06e-09,1;UBERON:0004904,1.06e-09,1;UBERON:0001021,1.06e-09,1;UBERON:0003902,1.06e-09,1;UBERON:0005425,1.06e-09,1;UBERON:0002336,1.62e-09,1;UBERON:0011215,1.62e-09,1;UBERON:0001018,1.62e-09,1;UBERON:0002473,1.62e-09,1;UBERON:0005340,1.62e-09,1;UBERON:0003544,1.62e-09,1;UBERON:0005970,1.62e-09,1;UBERON:0002316,1.62e-09,1;UBERON:0001020,1.62e-09,1;UBERON:0002437,1.62e-09,1;UBERON:0000080,5.83e-09,9;UBERON:0002120,5.83e-09,9;UBERON:0004875,5.83e-09,9;UBERON:0005721,5.83e-09,9;UBERON:0005754,5.83e-09,9;UBERON:0007297,5.83e-09,9;UBERON:0004876,2.04e-07,11;UBERON:0001225,7.79e-07,12;UBERON:0008987,7.79e-07,12;UBERON:0003887,7.79e-07,12 | |||
|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0.286235987131057,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0.786728553697808,0,0,0.919421224478927,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0.290796477559129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,0.426730222566507,0,0.574752439954483,1.32208974556972,0,0.569212969109448,0.587237189370939,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.43917392846563,0.261958150995425,0,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,1.13061588384802,0,0.550236083880135,0,0,0.35576626268671,0,0,0,0.732186172644509,0,1.62028389576352,0.267899184852239,0.22452937262617,0.225222960966644,0,0.949265659568129,0.183201743930407,1.31780417436063,0,0,0.496971951695318,0,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0.151357427644931,0,0,0,0.570471821544449,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0.245668634623536,0,0,0,0.910161361938026,0.718618141816238,0,0,0,0.438977620880838,0,0.150238058906597,0.226864366320042,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0.201504196455281,0,0.386521706326594,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0.383382679165211,0,6.51558411697873,7.04915592838625,7.35011762426503,11.2355765749478,0,0,0,0,0,0,0.571652865261156,0.448524337381443,0,0.22001485746285,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0.791951872933429,0.602878754119172,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0.500170521059677,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0.587403472388222,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0.229628896329213,0.364182336013434,0,0.451199612907412,0.385076685522074,0.784349769176855,0,0.211103257785751,1.13733384070897,0.170093705276516,0.863663664408557,1.54227252690289,0.812839312631559,2.00675909541941,0.764628819135115,0,0,0.657779629937804,0.261435451024901,0.256450125116389,0.656029291399411,0.325378394664303,0.206082023295445,0,0.082509499920588,0,0,0,0.193341436584244,0.462145851343933,0.15350367472613,0,0,0,0,0.178064071293475,0,0,0.638063562472921,0,0,0.31481234683064,0,0.616067160352178,0,0,0.18532421910392,0.286249773483982,0.372158369359667,0,0,0,0,0,0,0,0,0.471249609382746,0,0,0.421258456238981,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0,0.563391205064483,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0,0.229723400206959,0.507447609232169,0,0,0.238231775457789,0.411362273086194,0.648473311192717,0,0,0.106824071127473,0,0.245040215981032,0,0.144269212976445,0.0711418433484141,0,2.3949524571938,0.957526850661834,0.635020748171649,0.324621940274555,1.40398589056729,0,0,0,0,0.1605880751037,0,0,0.343505344755765,0.307240764308458,0,0,0,0.278406173895242,0,0,0.33307196799782,0,0.18714054040822,0.146508179271894,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0.409074730008619,0,0,0.539210106883961,0,0,0,0,0,0,0.278304294485554,0,0,0.349839999984783,0,0.227586896570999,0.254253650292766,0.472775363535873,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,0,0.627921025580099,1.66211681900156,0,0.392125068635479,0.167821586975843,0,0.158936578980379,0.210998064528027,0,0.424059214301822,0.432777279484182,0.995261931078505,0.265372693510018,0,0,0.123563938946503,0.104421949505455,1.21322039365219,0.802577647298789,0.234264445725339,0,0,0.242780379534093,0,0,0.91821828489147,0.063186579628488,0,0.207376382794494,0,0,0.313932918407225,0,0.284609546029793,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0.0730893170861856,0,0,0,0.451961481561065,0.274083849293502,0.19871461170299,0.253243183823515,0,0.480952921509202,0.426905989478705,0,0.432271251462318,0,0.343189995723929,0.14405479798815,0.124252535565433,0,0,0,0.101998217636322,0,0,0.684526894459965,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,1.08089965062721,0,0,0.0824158583811665,0.13480708770837,0,0,0,0.272406812223151,0.321506296930038,0.412618309791701,0,0,0,0.182248669974074,0,0,0.681909645754975,0,0,0.191915197319445,0,0,0,0,0,0,0,0.574647645245373,0.170388021785422,0.113312091520126,0.146552233678082,0,0.129282956361551,0.26446520348538,0.171086837884329,0,0.320362237703084,0,0.414239055347196,0.496166021811951,0,0.121792598380896,0,0,0,0,0,0,0,0.244052529803926,0,0.573409195690071,0.221858103073705,0.745156835296601,1.52183498429854,0.249960815924213,0,0,0.235265819698172,0,0.144921028610825,0,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|short_description=p3@SLC45A3 | |short_description=p3@SLC45A3 | ||
}} | }} |
Latest revision as of 03:32, 20 September 2015
Short description: | p3@SLC45A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC45A3_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | 11bp_to_ENST00000367145_5end |
EntrezGene: | SLC45A3 |
HGNC: | 8642 |
UniProt: | Q96JT2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.99e-28 | 5 |
basophil mast progenitor cell | 3.99e-28 | 5 |
endocrine cell | 9.74e-16 | 9 |
glomerular cell | 2.24e-11 | 7 |
kidney corpuscule cell | 2.24e-11 | 7 |
glomerular endothelial cell | 1.46e-07 | 5 |
kidney cortical cell | 7.79e-07 | 12 |
renal cortical epithelial cell | 7.79e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
chronic myeloid leukemia | 6.88e-10 | 1 |
osteosarcoma | 1.25e-09 | 1 |
liver cancer | 2.46e-09 | 1 |