FFCP PHASE1:Hg19::chr13:38158135..38158197,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:38158135..38158197,-
|short_description=p@chr13:38158135..38158197,-
|description=CAGE_peak_at_chr13:38158135..38158197,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:38158135..38158197,- | |||
|coexpression_cluster_id=C349 | |||
|description=CAGE_peak_at_chr13:38158135..38158197,- | |||
|id=chr13:38158135..38158197,- | |||
|ontology_enrichment_celltype=CL:0000055!1.02e-26!180;CL:0000680!4.49e-16!57;CL:0000056!4.49e-16!57;CL:0000355!4.49e-16!57;CL:0000057!2.15e-15!75;CL:0000187!2.15e-14!54;CL:0000393!2.45e-13!60;CL:0000211!2.45e-13!60;CL:0000183!3.92e-12!59;CL:0002334!8.78e-12!12;CL:0002494!6.17e-11!16;CL:0000048!2.23e-10!430;CL:0000723!4.20e-10!436;CL:0000034!1.56e-09!444;CL:0000192!1.03e-08!42;CL:0000514!1.03e-08!42;CL:0000222!2.48e-08!119;CL:0000359!6.31e-07!32;CL:0002548!6.82e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002334;5.87e-17;12!CL:0002494;3.79e-11;16!CL:0002548;1.44e-09;6!CL:0000187;2.12e-07;55!CL:1000306;6.32e-07;4!CL:0002547;6.32e-07;4!CL:0002570;7.30e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.74e-20,76;CL:0002334,6.91e-17,12;CL:0000048,4.33e-14,427;CL:0000723,5.08e-14,433;CL:0000680,1.21e-13,58;CL:0000056,1.21e-13,58;CL:0000355,1.21e-13,58;CL:0000034,2.92e-13,441;CL:0000187,1.97e-12,55;CL:0002494,3.58e-11,16;CL:0000393,1.83e-10,61;CL:0000211,1.83e-10,61;CL:0002548,1.45e-09,6;CL:0000192,4.92e-07,43;CL:0000514,4.92e-07,43;CL:1000306,6.02e-07,4;CL:0002547,6.02e-07,4;CL:0002570,6.03e-07,8;CL:0000222,6.32e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000355;7.09e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!7.73e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.35e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.83e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0001134!1.52e-16!61;UBERON:0002036!1.52e-16!61;UBERON:0003082!1.52e-16!61;UBERON:0002385!1.47e-15!63;UBERON:0001015!1.47e-15!63;UBERON:0000383!1.47e-15!63;UBERON:0004872!4.88e-13!84;UBERON:0004290!1.31e-12!70;UBERON:0000914!7.02e-12!83;UBERON:0002329!7.02e-12!83;UBERON:0003077!7.02e-12!83;UBERON:0003059!7.02e-12!83;UBERON:0007282!7.02e-12!83;UBERON:0009618!7.02e-12!83;UBERON:0007285!7.02e-12!83;UBERON:0001637!5.38e-11!42;UBERON:0003509!5.38e-11!42;UBERON:0004572!5.38e-11!42;UBERON:0000486!6.28e-10!82;UBERON:0000490!7.70e-10!138;UBERON:0000948!7.74e-10!24;UBERON:0005498!7.74e-10!24;UBERON:0004140!7.74e-10!24;UBERON:0009881!7.74e-10!24;UBERON:0004141!7.74e-10!24;UBERON:0003084!7.74e-10!24;UBERON:0007005!7.74e-10!24;UBERON:0004139!7.74e-10!24;UBERON:0004291!7.74e-10!24;UBERON:0004573!2.47e-09!33;UBERON:0004571!2.47e-09!33;UBERON:0004535!5.21e-09!110;UBERON:0001009!2.17e-08!113;UBERON:0001981!4.17e-08!60;UBERON:0007500!4.17e-08!60;UBERON:0004537!4.17e-08!60;UBERON:0006965!4.17e-08!60;UBERON:0007100!4.36e-08!27;UBERON:0003914!5.99e-08!118;UBERON:0005256!8.89e-08!143;UBERON:0002049!3.34e-07!79;UBERON:0007798!3.34e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;5.94e-10;31!UBERON:0001015;5.94e-10;31!UBERON:0000383;5.94e-10;31!UBERON:0000948;1.21e-08;22!UBERON:0004573;3.58e-08;33!UBERON:0004571;3.58e-08;33!UBERON:0007100;3.21e-07;25!UBERON:0001134;3.52e-07;16!UBERON:0002036;3.52e-07;16!UBERON:0004797;6.32e-07;4!UBERON:0000415;6.32e-07;4!UBERON:0007240;6.32e-07;4!UBERON:0005742;6.32e-07;4!UBERON:0005734;6.32e-07;4!UBERON:0004664;6.32e-07;4!UBERON:0004663;6.32e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.04e-14,62;UBERON:0002036,1.04e-14,62;UBERON:0003082,1.04e-14,62;UBERON:0002385,5.78e-14,64;UBERON:0001015,5.78e-14,64;UBERON:0000383,5.78e-14,64;UBERON:0007524,2.96e-12,73;UBERON:0002329,1.04e-11,71;UBERON:0003059,1.04e-11,71;UBERON:0007282,1.04e-11,71;UBERON:0004290,1.04e-11,71;UBERON:0009618,1.04e-11,71;UBERON:0003077,1.99e-11,72;UBERON:0007285,1.99e-11,72;UBERON:0007503,6.76e-10,78;UBERON:0004872,2.73e-09,83;UBERON:0000948,3.56e-09,24;UBERON:0005498,3.56e-09,24;UBERON:0004140,3.56e-09,24;UBERON:0009881,3.56e-09,24;UBERON:0004141,3.56e-09,24;UBERON:0003084,3.56e-09,24;UBERON:0007005,3.56e-09,24;UBERON:0004139,3.56e-09,24;UBERON:0004291,3.56e-09,24;UBERON:0000486,8.31e-09,83;UBERON:0004573,1.76e-08,33;UBERON:0004571,1.76e-08,33;UBERON:0007100,9.32e-08,27;UBERON:0001637,1.01e-07,42;UBERON:0003509,1.01e-07,42;UBERON:0004572,1.01e-07,42;UBERON:0005256,2.13e-07,122;UBERON:0000415,6.02e-07,4;UBERON:0007240,6.02e-07,4;UBERON:0005742,6.02e-07,4;UBERON:0005734,6.02e-07,4;UBERON:0004664,6.02e-07,4;UBERON:0004663,6.02e-07,4 | |||
|phase1_expression=0.908391896352783,1.07050261945492,1.83240725324762,4.00293193412522,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0.123766352960047,0,1.34465029290355,1.20538905604795,1.46062018077475,2.43966399395253,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.5045493051169,4.69490601792545,1.66221330396589,3.2529523714611,1.50401373190767,1.01392563272577,2.3858578411533,1.94653948121054,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0.838998872419812,0.550236083880135,0.835979866147242,0,0,0,0,0,0,0.367663080345869,3.24056779152704,0,0,0.112611480483322,0,0,0,0,0,0,21.866765874594,1.51956613997496,5.95841313659485,14.3418310374407,7.09336764396714,2.24271040056923,5.33744978648525,7.89336154934912,2.48968828319813,5.92726957106628,8.66348086501331,0.302714855289863,4.60940739583999,0,0,0,0,0,0,0,0,0,0,2.37600571456411,0.247266929278557,0,0,0.168336113954066,0,0,0,2.14541457059314,0.300476117813194,8.84771028648164,0.89694817844431,2.77624605464138,3.17897851739343,2.10063767259082,1.13357782162283,1.54584324027377,1.48893485065272,0,0.487185025805993,3.02920529092937,2.20919756741518,0.161646056818812,3.55009592516614,0.705264687593482,0,0,0.272746120590835,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.343135620597051,1.20725313949488,0,0,0,0,0,0,0,0.587043471179108,0,0,0.570762456703795,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,3.10252117818667,0,4.22651376278,1.86156681609409,3.12022310734098,0,0,0,0.857867961948885,0,0,1.62868092146868,1.42156779497018,0,12.6604538365026,8.71533458600294,26.5928156544272,0,0,0,4.0736225433569,5.7430967917057,0,3.04040744001916,0.410952645100767,2.32779252211864,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0.500170521059677,0,12.4782516918484,18.9134728124991,2.20783381047509,0.585707074963566,0,4.5481500811197,0,1.32845119707087,0.368738337083406,0.260650843404249,0,0,0,0,0,0,0,0,11.9091747753013,5.98501695823444,16.2782854771183,6.27881831352935,2.04682899626681,14.4768529029247,1.48418066444991,2.31314540703983,4.43904313282818,1.23190734020714,7.78881643775432,2.67283870457906,0,0.200506470303285,0,1.49258782613989,2.36718518408732,1.04899531967539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,1.6068392984416,2.12675580242668,1.54048617114644,1.22802939780904,0.413509717453592,0.966782203814463,1.88521702088497,1.27839941124151,7.30062692303246,1.15699440752685,0.768760269460425,0,0,0.464845549297286,6.61105928344344,0,0.616067160352178,0,0,1.66791797193528,3.72124705529177,0,0.316379424718726,0.38126038784765,0,0,0,2.35484592059769,1.61885211824983,3.56898138656871,1.64937363283961,0.606547444719948,0,1.26377536871694,0,4.14312932373184,0,3.27599787379166,20.3623822013346,0,0.551365343546124,1.99031692572366,2.63070531152258,0,1.31178950409327,0.811641507850816,0,0,0.286822704408103,0,2.49669736036875,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.597743964753209,0.276283915531148,0,0,0,6.22079175323615,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.341826167541004,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0,0,0,0,4.01288823649394,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,1.12990370390266,0,0,0,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0,0,0.732219924186332,0,0,0,0,0,0,0,2.23425921017803,0.229160424011684,0,0,0,0,0.134366944973453,3.24269895188163,0,0,0,0,0,0.0846733320657845,0,0.136203406111576,0,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.340776043570843,0,0,0,0,0,0,0,0.106787412567695,0.471612915298998,0.414239055347196,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,3.50569964770837,8.87689378404181,0.757612021100357,0.50313580350515,0,1.83072054717539,0.302461847526478,1.08806040407946,0.147855149989634,1.59296767163702,0.899606224327209,1.55262956876259,2.07353103920428,9.83614343864581,5.73919567992907,3.15540978894159,25.1331440031405,4.06870733204662,1.45478927362048,3.00749559718968,0,5.97143833047924,0.800055529326307,6.86791410365586,9.42898568544573,0,0,0,0,13.8290614562486,0,2.69210374957114,0.179088841081487,0,2.41212454536578,0,0,0,0,0,0,0,0,0,0,2.29326894192489,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.7661609741765,0,0,10.2276023670298,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90691047733584,0,0,0,0.40341013740704,0,0,4.09429793775242,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,0.0887023701626388,0,1.37190407549935,0,0,0,0,0.078493092850514,0,0,4.565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| ||
|short_description=p@chr13:38158135..38158197,- | |||
}} | }} |
Latest revision as of 15:53, 24 July 2015
Short description: | p@chr13:38158135..38158197, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:38158135..38158197, - |
Coexpression cluster: | C349_Mesothelial_Fibroblast_Preadipocyte_Ewing_mesenchymal_Skeletal_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.74e-20 | 76 |
preadipocyte | 6.91e-17 | 12 |
multi fate stem cell | 4.33e-14 | 427 |
somatic stem cell | 5.08e-14 | 433 |
muscle precursor cell | 1.21e-13 | 58 |
myoblast | 1.21e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.21e-13 | 58 |
stem cell | 2.92e-13 | 441 |
muscle cell | 1.97e-12 | 55 |
cardiocyte | 3.58e-11 | 16 |
electrically responsive cell | 1.83e-10 | 61 |
electrically active cell | 1.83e-10 | 61 |
cardiac fibroblast | 1.45e-09 | 6 |
smooth muscle cell | 4.92e-07 | 43 |
smooth muscle myoblast | 4.92e-07 | 43 |
fibroblast of tunica adventitia of artery | 6.02e-07 | 4 |
fibroblast of the aortic adventitia | 6.02e-07 | 4 |
mesenchymal stem cell of adipose | 6.03e-07 | 8 |
mesodermal cell | 6.32e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.83e-11 | 14 |