FFCP PHASE1:Hg19::chr2:56216687..56216727,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=406998 | |EntrezGene=406998 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=31593 | |HGNC=31593 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-493bp_to_NR_029629,uc010ype.1_5end | |association_with_transcript=-493bp_to_NR_029629,uc010ype.1_5end | ||
|cluster_id=chr2:56216687..56216727,- | |||
|coexpression_cluster_id=C381 | |||
|description=CAGE_peak_1_at_MIR216A_5end | |description=CAGE_peak_1_at_MIR216A_5end | ||
|id=chr2:56216687..56216727,- | |id=chr2:56216687..56216727,- | ||
|ontology_enrichment_celltype=CL:0002139!4.38e-117!24;CL:0000115!1.64e-107!35;CL:0000071!2.91e-88!18;CL:0002546!2.91e-88!18;CL:0002078!2.90e-84!44;CL:0000213!2.28e-68!57;CL:0000215!2.28e-68!57;CL:1000413!8.61e-45!9;CL:0000222!1.02e-31!119;CL:0002543!1.01e-30!6;CL:0002544!1.11e-30!6;CL:0005020!9.19e-30!6;CL:0002138!9.19e-30!6;CL:0005022!9.19e-30!6;CL:0000076!2.54e-25!62;CL:0002618!1.61e-16!3;CL:0002144!9.95e-16!3;CL:0000220!5.60e-14!246;CL:0002321!8.22e-14!248;CL:0000066!2.08e-12!254;CL:0002545!1.26e-11!2;CL:0002262!9.09e-11!2;CL:1000398!9.09e-11!2;CL:1000612!7.61e-07!7;CL:1000746!7.61e-07!7 | |ontology_enrichment_celltype=CL:0002139!4.38e-117!24;CL:0000115!1.64e-107!35;CL:0000071!2.91e-88!18;CL:0002546!2.91e-88!18;CL:0002078!2.90e-84!44;CL:0000213!2.28e-68!57;CL:0000215!2.28e-68!57;CL:1000413!8.61e-45!9;CL:0000222!1.02e-31!119;CL:0002543!1.01e-30!6;CL:0002544!1.11e-30!6;CL:0005020!9.19e-30!6;CL:0002138!9.19e-30!6;CL:0005022!9.19e-30!6;CL:0000076!2.54e-25!62;CL:0002618!1.61e-16!3;CL:0002144!9.95e-16!3;CL:0000220!5.60e-14!246;CL:0002321!8.22e-14!248;CL:0000066!2.08e-12!254;CL:0002545!1.26e-11!2;CL:0002262!9.09e-11!2;CL:1000398!9.09e-11!2;CL:1000612!7.61e-07!7;CL:1000746!7.61e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.78e-154;24!CL:0000071;2.88e-126;18!CL:0000115;9.81e-117;36!CL:0002078;1.97e-68;45!CL:1000413;1.29e-63;9!CL:0000213;1.14e-53;58!CL:0000215;1.14e-53;58!CL:0002543;2.02e-43;6!CL:0002544;2.42e-43;6!CL:0002138;7.46e-30;6!CL:0002618;5.63e-23;3!CL:0002144;6.93e-22;3!CL:0000076;2.04e-20;63!CL:0002545;5.56e-16;2!CL:0002188;4.45e-13;5!CL:1000746;1.71e-09;7!CL:1000612;1.71e-09;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.55e-154,24;CL:0000115,1.61e-140,36;CL:0000071,2.40e-126,18;CL:0002546,2.40e-126,18;CL:0002078,1.28e-111,45;CL:0000213,1.08e-85,58;CL:0000215,1.08e-85,58;CL:1000413,1.07e-63,9;CL:0002543,1.95e-43,6;CL:0002544,2.25e-43,6;CL:0000222,6.70e-39,121;CL:0000076,9.90e-34,63;CL:0005020,7.69e-30,6;CL:0002138,7.69e-30,6;CL:0005022,7.69e-30,6;CL:0002618,5.23e-23,3;CL:0002144,7.18e-22,3;CL:0002321,2.16e-16,250;CL:0000066,2.62e-16,253;CL:0002545,5.56e-16,2;CL:0002188,4.74e-13,5;CL:1000746,1.79e-09,7;CL:1000612,1.79e-09,7 | |||
|ontology_enrichment_development_v019=CL:0002546;2.88e-126;18!CL:0005022;7.46e-30;6!CL:0000222;7.40e-16;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!2.91e-88!18;UBERON:0004638!2.91e-88!18;UBERON:0004852!2.91e-88!18;UBERON:0000487!1.87e-71!22;UBERON:0006914!2.23e-62!25;UBERON:0000055!2.50e-51!69;UBERON:0003915!8.61e-45!9;UBERON:0004700!8.61e-45!9;UBERON:0001917!8.61e-45!9;UBERON:0002049!4.83e-44!79;UBERON:0007798!4.83e-44!79;UBERON:0001981!8.49e-36!60;UBERON:0007500!8.49e-36!60;UBERON:0004537!8.49e-36!60;UBERON:0006965!8.49e-36!60;UBERON:0004535!7.18e-30!110;UBERON:0001009!6.54e-29!113;UBERON:0004872!4.15e-24!84;UBERON:0001473!3.44e-22!8;UBERON:0004536!3.44e-22!8;UBERON:0006558!3.44e-22!8;UBERON:0003914!4.83e-21!118;UBERON:0001638!2.72e-20!9;UBERON:0003920!2.72e-20!9;UBERON:0004582!2.72e-20!9;UBERON:0002465!1.22e-17!10;UBERON:0004111!6.32e-17!241;UBERON:0001915!9.95e-16!3;UBERON:0001982!9.95e-16!3;UBERON:0000477!3.22e-14!286;UBERON:0000025!6.68e-14!194;UBERON:0000490!1.08e-12!138;UBERON:0005800!1.26e-11!2;UBERON:0001515!1.26e-11!2;UBERON:0001637!2.93e-10!42;UBERON:0003509!2.93e-10!42;UBERON:0004572!2.93e-10!42;UBERON:0002066!4.27e-10!5;UBERON:0003081!7.74e-10!216;UBERON:0000947!2.55e-08!21;UBERON:0010191!2.55e-08!21;UBERON:0000483!5.72e-08!309;UBERON:0000119!7.85e-08!312;UBERON:0003497!1.87e-07!3;UBERON:0003909!1.87e-07!3;UBERON:0003835!1.87e-07!3;UBERON:0001281!1.87e-07!3;UBERON:0000353!5.31e-07!17;UBERON:0000074!7.61e-07!7;UBERON:0001229!7.61e-07!7;UBERON:0001230!7.61e-07!7;UBERON:0005749!7.61e-07!7;UBERON:0004199!7.61e-07!7;UBERON:0004209!7.61e-07!7;UBERON:0004198!7.61e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.88e-126;18!UBERON:0001986;2.88e-126;18!UBERON:0004852;2.88e-126;18!UBERON:0000487;9.94e-103;22!UBERON:0006914;5.15e-90;25!UBERON:0003915;1.29e-63;9!UBERON:0004700;1.29e-63;9!UBERON:0001917;1.29e-63;9!UBERON:0000490;1.03e-61;33!UBERON:0000055;5.02e-31;65!UBERON:0001638;7.97e-29;9!UBERON:0003920;7.97e-29;9!UBERON:0004582;7.97e-29;9!UBERON:0007500;5.93e-27;56!UBERON:0001981;5.93e-27;56!UBERON:0004537;5.93e-27;56!UBERON:0001473;2.24e-22;8!UBERON:0004536;2.24e-22;8!UBERON:0006558;2.24e-22;8!UBERON:0010523;6.93e-22;3!UBERON:0001915;6.93e-22;3!UBERON:0001982;6.93e-22;3!UBERON:0002049;1.52e-21;75!UBERON:0007798;1.52e-21;75!UBERON:0003914;2.74e-21;74!UBERON:0002465;7.02e-18;10!UBERON:0005800;5.56e-16;2!UBERON:0001515;5.56e-16;2!UBERON:0000025;2.25e-14;93!UBERON:0002066;5.11e-14;5!UBERON:0001009;2.49e-13;112!UBERON:0004535;2.66e-12;109!UBERON:0001637;3.21e-12;42!UBERON:0003509;3.21e-12;42!UBERON:0004572;3.21e-12;42!UBERON:0000947;4.62e-12;21!UBERON:0010191;4.62e-12;21!UBERON:0004111;5.35e-11;130!UBERON:0000074;1.71e-09;7!UBERON:0001229;1.71e-09;7!UBERON:0000119;3.06e-08;139!UBERON:0000483;3.13e-08;136!UBERON:0010260;5.33e-08;9!UBERON:0004573;8.27e-08;33!UBERON:0004571;8.27e-08;33!UBERON:0000353;1.28e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.40e-126,18;UBERON:0001986,2.40e-126,18;UBERON:0004852,2.40e-126,18;UBERON:0000487,8.56e-103,22;UBERON:0006914,4.52e-90,25;UBERON:0003915,1.07e-63,9;UBERON:0004700,1.07e-63,9;UBERON:0001917,1.07e-63,9;UBERON:0000055,7.55e-57,68;UBERON:0002049,4.86e-49,78;UBERON:0007798,4.86e-49,78;UBERON:0007500,1.54e-40,59;UBERON:0001981,1.54e-40,59;UBERON:0004537,1.54e-40,59;UBERON:0006965,1.54e-40,59;UBERON:0004535,6.36e-34,109;UBERON:0001009,6.66e-33,112;UBERON:0001638,7.78e-29,9;UBERON:0003920,7.78e-29,9;UBERON:0004582,7.78e-29,9;UBERON:0004872,8.73e-28,83;UBERON:0003914,1.13e-25,117;UBERON:0001473,2.29e-22,8;UBERON:0004536,2.29e-22,8;UBERON:0006558,2.29e-22,8;UBERON:0010523,7.18e-22,3;UBERON:0001915,7.18e-22,3;UBERON:0001982,7.18e-22,3;UBERON:0002465,7.15e-18,10;UBERON:0004111,2.41e-17,240;UBERON:0005800,5.56e-16,2;UBERON:0001515,5.56e-16,2;UBERON:0000490,1.11e-15,148;UBERON:0002066,4.89e-14,5;UBERON:0000025,5.79e-14,192;UBERON:0003081,5.46e-13,203;UBERON:0001637,1.37e-12,42;UBERON:0003509,1.37e-12,42;UBERON:0004572,1.37e-12,42;UBERON:0000947,4.53e-12,21;UBERON:0010191,4.53e-12,21;UBERON:0010532,1.79e-09,7;UBERON:0000074,1.79e-09,7;UBERON:0001229,1.79e-09,7;UBERON:0001230,1.79e-09,7;UBERON:0003220,1.79e-09,7;UBERON:0005749,1.79e-09,7;UBERON:0004199,1.79e-09,7;UBERON:0004209,1.79e-09,7;UBERON:0004198,1.79e-09,7;UBERON:0005103,2.37e-08,8;UBERON:0000083,2.37e-08,8;UBERON:0009201,2.37e-08,8;UBERON:0006553,2.37e-08,8;UBERON:0003074,2.37e-08,8;UBERON:0003060,2.37e-08,8;UBERON:0000483,3.78e-08,306;UBERON:0000119,4.99e-08,309;UBERON:0010260,5.21e-08,9;UBERON:0000926,8.57e-08,315;UBERON:0004120,8.57e-08,315;UBERON:0006603,8.57e-08,315;UBERON:0000353,1.33e-07,15;UBERON:0004573,1.74e-07,33;UBERON:0004571,1.74e-07,33;UBERON:0000080,1.78e-07,9;UBERON:0002120,1.78e-07,9;UBERON:0004875,1.78e-07,9;UBERON:0005721,1.78e-07,9;UBERON:0005754,1.78e-07,9;UBERON:0007297,1.78e-07,9 | |||
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|short_description=p1@MIR216A | |short_description=p1@MIR216A | ||
}} | }} |
Latest revision as of 18:24, 17 September 2015
Short description: | p1@MIR216A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIR216A_5end |
Coexpression cluster: | C381_Endothelial_Renal_Hepatic_Lymphatic_Fibroblast_squamous_esophagus |
Association with transcript: | -493bp_to_NR_029629, uc010ype.1_5end |
EntrezGene: | MIR216A |
HGNC: | 31593 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.55e-154 | 24 |
endothelial cell | 1.61e-140 | 36 |
blood vessel endothelial cell | 2.40e-126 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.40e-126 | 18 |
meso-epithelial cell | 1.28e-111 | 45 |
lining cell | 1.08e-85 | 58 |
barrier cell | 1.08e-85 | 58 |
endothelial cell of artery | 1.07e-63 | 9 |
vein endothelial cell | 1.95e-43 | 6 |
aortic endothelial cell | 2.25e-43 | 6 |
mesodermal cell | 6.70e-39 | 121 |
squamous epithelial cell | 9.90e-34 | 63 |
lymphangioblast | 7.69e-30 | 6 |
endothelial cell of lymphatic vessel | 7.69e-30 | 6 |
vascular lymphangioblast | 7.69e-30 | 6 |
endothelial cell of umbilical vein | 5.23e-23 | 3 |
capillary endothelial cell | 7.18e-22 | 3 |
embryonic cell | 2.16e-16 | 250 |
epithelial cell | 2.62e-16 | 253 |
thoracic aorta endothelial cell | 5.56e-16 | 2 |
glomerular endothelial cell | 4.74e-13 | 5 |
glomerular cell | 1.79e-09 | 7 |
kidney corpuscule cell | 1.79e-09 | 7 |