FFCP PHASE1:Hg19::chr3:112080879..112080893,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:112080879..112080893,+ | |||
|description=CAGE_peak_at_chr3:112080879..112080893,+ | |description=CAGE_peak_at_chr3:112080879..112080893,+ | ||
|id=chr3:112080879..112080893,+ | |id=chr3:112080879..112080893,+ | ||
|ontology_enrichment_celltype=CL:0000359!6.62e-10!32;CL:0000393!5.05e-08!60;CL:0000211!5.05e-08!60;CL:0000222!1.36e-07!119;CL:0000192!2.73e-07!42;CL:0000514!2.73e-07!42;CL:0000187!7.25e-07!54 | |ontology_enrichment_celltype=CL:0000359!6.62e-10!32;CL:0000393!5.05e-08!60;CL:0000211!5.05e-08!60;CL:0000222!1.36e-07!119;CL:0000192!2.73e-07!42;CL:0000514!2.73e-07!42;CL:0000187!7.25e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0002539;1.61e-10;10!CL:0002593;8.05e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002539,1.37e-10,10 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.13e-15;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!8.57e-26!59;UBERON:0001049!2.05e-25!57;UBERON:0005068!2.05e-25!57;UBERON:0006241!2.05e-25!57;UBERON:0007135!2.05e-25!57;UBERON:0001017!4.03e-23!82;UBERON:0002780!9.06e-23!41;UBERON:0001890!9.06e-23!41;UBERON:0006240!9.06e-23!41;UBERON:0000955!1.28e-22!69;UBERON:0006238!1.28e-22!69;UBERON:0003080!5.10e-22!42;UBERON:0005743!1.97e-21!86;UBERON:0002020!2.70e-21!34;UBERON:0003528!2.70e-21!34;UBERON:0001893!9.26e-21!34;UBERON:0000073!3.47e-20!94;UBERON:0001016!3.47e-20!94;UBERON:0002791!5.50e-20!33;UBERON:0001869!7.71e-19!32;UBERON:0000025!1.33e-18!194;UBERON:0002619!3.02e-18!22;UBERON:0001950!7.13e-18!20;UBERON:0003075!5.74e-17!86;UBERON:0007284!5.74e-17!86;UBERON:0002346!1.09e-15!90;UBERON:0000956!1.77e-15!25;UBERON:0000203!1.77e-15!25;UBERON:0007023!1.52e-14!115;UBERON:0003056!1.16e-13!61;UBERON:0000483!9.94e-13!309;UBERON:0004111!1.55e-12!241;UBERON:0000119!2.15e-12!312;UBERON:0000477!3.00e-12!286;UBERON:0000153!1.99e-09!129;UBERON:0007811!1.99e-09!129;UBERON:0000033!3.62e-09!123;UBERON:0001637!8.06e-09!42;UBERON:0003509!8.06e-09!42;UBERON:0004572!8.06e-09!42;UBERON:0004121!1.92e-08!169;UBERON:0004872!4.48e-08!84;UBERON:0001872!5.11e-08!5;UBERON:0000924!5.71e-08!173;UBERON:0006601!5.71e-08!173;UBERON:0002049!1.63e-07!79;UBERON:0007798!1.63e-07!79;UBERON:0001981!1.65e-07!60;UBERON:0007500!1.65e-07!60;UBERON:0004537!1.65e-07!60;UBERON:0006965!1.65e-07!60;UBERON:0002420!1.72e-07!9;UBERON:0007245!1.72e-07!9;UBERON:0010009!1.72e-07!9;UBERON:0010011!1.72e-07!9;UBERON:0000454!1.72e-07!9;UBERON:0002308!2.65e-07!9;UBERON:0000125!2.65e-07!9;UBERON:0000055!3.13e-07!69;UBERON:0001871!4.93e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.21e-17;22!UBERON:0000956;4.32e-15;25!UBERON:0000203;4.32e-15;25!UBERON:0000073;2.19e-13;53!UBERON:0002616;2.19e-13;53!UBERON:0001950;2.92e-13;20!UBERON:0003296;5.39e-12;4!UBERON:0010133;5.39e-12;4!UBERON:0002780;1.89e-11;41!UBERON:0001890;1.89e-11;41!UBERON:0002791;3.27e-11;32!UBERON:0001869;3.27e-11;32!UBERON:0001893;3.83e-11;34!UBERON:0000955;1.58e-10;68!UBERON:0004237;1.61e-10;10!UBERON:0004695;1.61e-10;10!UBERON:0002111;1.61e-10;10!UBERON:0004178;1.61e-10;10!UBERON:0003528;1.63e-10;34!UBERON:0002020;1.63e-10;34!UBERON:0001872;8.86e-10;5!UBERON:0000349;8.86e-10;5!UBERON:0000947;1.21e-08;21!UBERON:0010191;1.21e-08;21!UBERON:0002037;2.70e-08;6!UBERON:0004573;6.57e-08;33!UBERON:0004571;6.57e-08;33!UBERON:0001016;2.10e-07;83!UBERON:0001871;2.37e-07;6!UBERON:0001894;3.14e-07;7!UBERON:0001135;3.50e-07;15!UBERON:0002771;4.82e-07;2!UBERON:0001876;8.05e-07;2!UBERON:0001905;8.05e-07;2!UBERON:0000007;8.05e-07;2!UBERON:0001954;8.05e-07;2!UBERON:0002757;8.05e-07;2!UBERON:0010134;8.05e-07;2!UBERON:0003022;8.05e-07;2!UBERON:0005408;8.05e-07;2!UBERON:0002456;8.05e-07;2!UBERON:0002421;8.05e-07;2!UBERON:0001899;8.05e-07;2!UBERON:0002600;8.05e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.48e-19,53;UBERON:0002616,2.48e-19,53;UBERON:0001049,3.02e-18,56;UBERON:0005068,3.02e-18,56;UBERON:0006241,3.02e-18,56;UBERON:0007135,3.02e-18,56;UBERON:0002619,2.53e-17,22;UBERON:0002780,3.86e-16,41;UBERON:0001890,3.86e-16,41;UBERON:0003080,3.86e-16,41;UBERON:0006240,3.86e-16,41;UBERON:0000956,2.75e-15,25;UBERON:0000203,2.75e-15,25;UBERON:0000955,1.29e-14,68;UBERON:0006238,1.29e-14,68;UBERON:0000025,2.21e-14,192;UBERON:0001950,2.09e-13,20;UBERON:0001017,4.04e-12,81;UBERON:0003075,4.04e-12,82;UBERON:0007284,4.04e-12,82;UBERON:0002791,5.75e-12,32;UBERON:0001869,5.75e-12,32;UBERON:0003296,8.39e-12,4;UBERON:0010133,8.39e-12,4;UBERON:0002346,1.68e-11,86;UBERON:0003528,2.92e-11,34;UBERON:0002020,2.92e-11,34;UBERON:0001893,2.92e-11,34;UBERON:0004111,4.58e-11,240;UBERON:0001016,8.39e-11,89;UBERON:0003056,1.19e-10,61;UBERON:0004237,1.37e-10,10;UBERON:0004695,1.37e-10,10;UBERON:0002111,1.37e-10,10;UBERON:0004178,1.37e-10,10;UBERON:0010314,2.50e-10,132;UBERON:0000349,5.20e-10,5;UBERON:0001872,7.11e-10,5;UBERON:0010371,2.69e-09,104;UBERON:0000947,1.19e-08,21;UBERON:0010191,1.19e-08,21;UBERON:0002037,2.25e-08,6;UBERON:0006215,2.25e-08,6;UBERON:0004573,3.10e-08,33;UBERON:0004571,3.10e-08,33;UBERON:0000483,3.53e-08,306;UBERON:0000119,4.47e-08,309;UBERON:0001871,1.90e-07,6;UBERON:0001135,3.15e-07,15;UBERON:0001894,4.04e-07,7;UBERON:0006222,4.04e-07,7;UBERON:0002771,4.83e-07,2;UBERON:0001876,5.41e-07,2;UBERON:0001954,6.07e-07,2;UBERON:0003022,6.07e-07,2;UBERON:0002421,6.07e-07,2;UBERON:0002600,6.07e-07,2;UBERON:0007023,8.60e-07,114;UBERON:0000007,9.02e-07,2 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,1.46062018077475,0,0,0,0,0,0,0,0,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0.838998872419812,0.275118041940067,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,1.14734648299525,0,1.12135520028461,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0,0.310983165046111,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.899756920638513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0.929691098594572,1.5740617341532,0.6970372701606,0,0,0,0,0.143124886741991,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0.404364963146632,0,0.421258456238981,0,0.974853958525138,1.05650146756755,0,0,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0.281695602532241,0.286822704408103,0.0982490410131212,0,0,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.140669416410513,0.890469640183247,0,0.422250816255987,0.796991953004279,0,0.251932747854276,0,0.123084805461069,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.694499979733169,0.885741385813839,0.120596438625408,1.52581736317083,0.221158519862449,1.47773809476774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.61214552326098,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0.379864775735272,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0.0846733320657845,1.59045937961861,0,0.482259445395058,0,0.415440338029185,0,0,0.242998226632099,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,2.19647276823534,0,0,0.221858103073705,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,1.18284119991707,0.318593534327405,0,0.155262956876259,0,0.53168342911599,0,2.10360652596106,0,0,0.363697318405119,0.966695013382396,0,0,0,0,0,0,0,0.214441591374926,0.521988583930423,0,0.231522474323834,0,0,0.308801447160972,0.657852148736121,0.176689145945881,0.38582807654183,0.168942440653073,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,2.8339315265117,0.478901577171454,0,0.252071696221718,0.207471757392654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0.781078098613847,1.2401207790071,0.126831620387814,1.64092442705466,0,0.496211178389294,0,0,1.07140367175657,0,1.21393120847326,0.227662191351298,0.177404740325278,0.230467975111559,0,0.135939465953663,0.197318320688547,0,0,0,0.785577949580009,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655678681511872,0,0.490296643507811,0,0.196308467114945,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0.430018749454354,0,0.543931921527318,0,0.5290268405154,0,0,0,0,0.327796715891087,0,0.101988829741982,0,0,0.250707539292375,0,0,0,0.103432995861895,0,0,0.0645889098360061,0.248298857183432,0,0.12729431655633,0.202117188958219,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,1.46062018077475,0,0,0,0,0,0,0,0,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0.838998872419812,0.275118041940067,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,1.14734648299525,0,1.12135520028461,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0,0.310983165046111,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.899756920638513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0.929691098594572,1.5740617341532,0.6970372701606,0,0,0,0,0.143124886741991,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0.404364963146632,0,0.421258456238981,0,0.974853958525138,1.05650146756755,0,0,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0.281695602532241,0.286822704408103,0.0982490410131212,0,0,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.140669416410513,0.890469640183247,0,0.422250816255987,0.796991953004279,0,0.251932747854276,0,0.123084805461069,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.694499979733169,0.885741385813839,0.120596438625408,1.52581736317083,0.221158519862449,1.47773809476774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.61214552326098,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0.379864775735272,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0.0846733320657845,1.59045937961861,0,0.482259445395058,0,0.415440338029185,0,0,0.242998226632099,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,2.19647276823534,0,0,0.221858103073705,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,1.18284119991707,0.318593534327405,0,0.155262956876259,0,0.53168342911599,0,2.10360652596106,0,0,0.363697318405119,0.966695013382396,0,0,0,0,0,0,0,0.214441591374926,0.521988583930423,0,0.231522474323834,0,0,0.308801447160972,0.657852148736121,0.176689145945881,0.38582807654183,0.168942440653073,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,2.8339315265117,0.478901577171454,0,0.252071696221718,0.207471757392654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0.781078098613847,1.2401207790071,0.126831620387814,1.64092442705466,0,0.496211178389294,0,0,1.07140367175657,0,1.21393120847326,0.227662191351298,0.177404740325278,0.230467975111559,0,0.135939465953663,0.197318320688547,0,0,0,0.785577949580009,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655678681511872,0,0.490296643507811,0,0.196308467114945,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0.430018749454354,0,0.543931921527318,0,0.5290268405154,0,0,0,0,0.327796715891087,0,0.101988829741982,0,0,0.250707539292375,0,0,0,0.103432995861895,0,0,0.0645889098360061,0.248298857183432,0,0.12729431655633,0.202117188958219,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr3:112080879..112080893,+ | |short_description=p@chr3:112080879..112080893,+ | ||
}} | }} |
Latest revision as of 14:15, 29 July 2015
Short description: | p@chr3:112080879..112080893, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:112080879..112080893, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic smooth muscle cell | 1.37e-10 | 10 |