FFCP PHASE1:Hg19::chr5:135382596..135382676,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7045 | |EntrezGene=7045 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11771 | |HGNC=11771 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-336bp_to_ENST00000508767_5end | |association_with_transcript=-336bp_to_ENST00000508767_5end | ||
|cluster_id=chr5:135382596..135382676,+ | |||
|coexpression_cluster_id=C295 | |||
|description=CAGE_peak_3_at_TGFBI_5end | |description=CAGE_peak_3_at_TGFBI_5end | ||
|id=chr5:135382596..135382676,+ | |id=chr5:135382596..135382676,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.34e-27!180;CL:0002371!2.04e-19!591;CL:0000144!1.99e-17!625;CL:0000680!1.64e-16!57;CL:0000056!1.64e-16!57;CL:0000355!1.64e-16!57;CL:0000057!1.79e-15!75;CL:0000548!7.82e-15!679;CL:0000004!7.82e-15!679;CL:0000255!7.82e-15!679;CL:0000187!7.83e-15!54;CL:0000012!2.88e-14!682;CL:0000183!3.22e-14!59;CL:0000048!2.59e-13!430;CL:0000723!6.63e-13!436;CL:0000393!4.13e-12!60;CL:0000211!4.13e-12!60;CL:0000192!4.16e-12!42;CL:0000514!4.16e-12!42;CL:0000034!9.64e-12!444;CL:0000359!7.93e-11!32;CL:0002194!2.99e-08!63;CL:0000576!2.99e-08!63;CL:0000040!2.99e-08!63;CL:0000559!2.99e-08!63;CL:0000222!3.37e-08!119;CL:0002009!3.77e-08!65;CL:0002334!1.86e-07!12;CL:0002057!2.54e-07!42;CL:0002620!8.37e-07!23 | |ontology_enrichment_celltype=CL:0000055!4.34e-27!180;CL:0002371!2.04e-19!591;CL:0000144!1.99e-17!625;CL:0000680!1.64e-16!57;CL:0000056!1.64e-16!57;CL:0000355!1.64e-16!57;CL:0000057!1.79e-15!75;CL:0000548!7.82e-15!679;CL:0000004!7.82e-15!679;CL:0000255!7.82e-15!679;CL:0000187!7.83e-15!54;CL:0000012!2.88e-14!682;CL:0000183!3.22e-14!59;CL:0000048!2.59e-13!430;CL:0000723!6.63e-13!436;CL:0000393!4.13e-12!60;CL:0000211!4.13e-12!60;CL:0000192!4.16e-12!42;CL:0000514!4.16e-12!42;CL:0000034!9.64e-12!444;CL:0000359!7.93e-11!32;CL:0002194!2.99e-08!63;CL:0000576!2.99e-08!63;CL:0000040!2.99e-08!63;CL:0000559!2.99e-08!63;CL:0000222!3.37e-08!119;CL:0002009!3.77e-08!65;CL:0002334!1.86e-07!12;CL:0002057!2.54e-07!42;CL:0002620!8.37e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000359;9.42e-11;32!CL:0000192;6.99e-09;43!CL:0000187;8.91e-09;55!CL:0000860;4.82e-08;33!CL:0002057;4.82e-08;33!CL:0000473;4.90e-08;39!CL:0000234;4.90e-08;39!CL:0002334;7.03e-08;12!CL:0002620;4.82e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,8.48e-17,58;CL:0000056,8.48e-17,58;CL:0000355,8.48e-17,58;CL:0000048,9.45e-17,427;CL:0000723,3.24e-16,433;CL:0000057,4.12e-16,76;CL:0000187,4.98e-15,55;CL:0000034,1.45e-14,441;CL:0000192,4.30e-12,43;CL:0000514,4.30e-12,43;CL:0000393,1.03e-11,61;CL:0000211,1.03e-11,61;CL:0000359,3.54e-11,32;CL:0000473,3.28e-09,48;CL:0000234,3.28e-09,48;CL:0002320,1.81e-08,361;CL:0002194,1.89e-08,59;CL:0000576,1.89e-08,59;CL:0000040,1.89e-08,59;CL:0000559,1.89e-08,59;CL:0002009,2.45e-08,61;CL:0002334,6.71e-08,12;CL:0000860,7.28e-08,42;CL:0002057,7.28e-08,42;CL:0000134,1.00e-07,354;CL:0000222,3.05e-07,121;CL:0002620,4.25e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000355;4.04e-09;58!CL:0000514;6.99e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!4.96e-18!167;UBERON:0000486!5.67e-17!82;UBERON:0004290!6.23e-16!70;UBERON:0000914!1.04e-15!83;UBERON:0002329!1.04e-15!83;UBERON:0003077!1.04e-15!83;UBERON:0003059!1.04e-15!83;UBERON:0007282!1.04e-15!83;UBERON:0009618!1.04e-15!83;UBERON:0007285!1.04e-15!83;UBERON:0001134!1.33e-15!61;UBERON:0002036!1.33e-15!61;UBERON:0003082!1.33e-15!61;UBERON:0002385!4.99e-15!63;UBERON:0001015!4.99e-15!63;UBERON:0000383!4.99e-15!63;UBERON:0000926!1.73e-14!448;UBERON:0004120!1.73e-14!448;UBERON:0006603!1.73e-14!448;UBERON:0000468!2.19e-14!659;UBERON:0000467!4.25e-12!625;UBERON:0005256!4.41e-12!143;UBERON:0000480!7.61e-12!626;UBERON:0003081!5.10e-10!216;UBERON:0001637!1.57e-09!42;UBERON:0003509!1.57e-09!42;UBERON:0004572!1.57e-09!42;UBERON:0000490!1.83e-09!138;UBERON:0002100!1.84e-09!216;UBERON:0002050!5.37e-09!605;UBERON:0005423!5.37e-09!605;UBERON:0000923!7.06e-09!604;UBERON:0005291!7.06e-09!604;UBERON:0006598!7.06e-09!604;UBERON:0002532!7.06e-09!604;UBERON:0000922!9.57e-09!612;UBERON:0004573!1.58e-08!33;UBERON:0004571!1.58e-08!33;UBERON:0004872!3.39e-08!84;UBERON:0000479!3.16e-07!787;UBERON:0003914!5.19e-07!118;UBERON:0002199!9.54e-07!45;UBERON:0002416!9.54e-07!45 | |ontology_enrichment_uberon=UBERON:0002204!4.96e-18!167;UBERON:0000486!5.67e-17!82;UBERON:0004290!6.23e-16!70;UBERON:0000914!1.04e-15!83;UBERON:0002329!1.04e-15!83;UBERON:0003077!1.04e-15!83;UBERON:0003059!1.04e-15!83;UBERON:0007282!1.04e-15!83;UBERON:0009618!1.04e-15!83;UBERON:0007285!1.04e-15!83;UBERON:0001134!1.33e-15!61;UBERON:0002036!1.33e-15!61;UBERON:0003082!1.33e-15!61;UBERON:0002385!4.99e-15!63;UBERON:0001015!4.99e-15!63;UBERON:0000383!4.99e-15!63;UBERON:0000926!1.73e-14!448;UBERON:0004120!1.73e-14!448;UBERON:0006603!1.73e-14!448;UBERON:0000468!2.19e-14!659;UBERON:0000467!4.25e-12!625;UBERON:0005256!4.41e-12!143;UBERON:0000480!7.61e-12!626;UBERON:0003081!5.10e-10!216;UBERON:0001637!1.57e-09!42;UBERON:0003509!1.57e-09!42;UBERON:0004572!1.57e-09!42;UBERON:0000490!1.83e-09!138;UBERON:0002100!1.84e-09!216;UBERON:0002050!5.37e-09!605;UBERON:0005423!5.37e-09!605;UBERON:0000923!7.06e-09!604;UBERON:0005291!7.06e-09!604;UBERON:0006598!7.06e-09!604;UBERON:0002532!7.06e-09!604;UBERON:0000922!9.57e-09!612;UBERON:0004573!1.58e-08!33;UBERON:0004571!1.58e-08!33;UBERON:0004872!3.39e-08!84;UBERON:0000479!3.16e-07!787;UBERON:0003914!5.19e-07!118;UBERON:0002199!9.54e-07!45;UBERON:0002416!9.54e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0002385;3.94e-08;31!UBERON:0001015;3.94e-08;31!UBERON:0000383;3.94e-08;31!UBERON:0004573;1.67e-07;33!UBERON:0004571;1.67e-07;33 | |||
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|phase1_expression=32.8837866479708,83.4992043174834,31.1509233052096,31.0227224894704,53.6353313312745,27.0424942471114,30.3959853801973,9.47579810140246,0,9.58362352355885,5.58240934377942,19.4412821195853,36.663609973755,2.72285976512103,8.94772914465373,77.3173918419542,56.0505911062299,46.0095356944045,40.0104895008216,25.1166958476647,39.1681327188966,43.5702062854542,2.57612388417951,16.0143077335275,7.90918629447258,0.0764134057479513,0,0,1.57345710739562,0,2.32224184974114,0.919421224478927,12.9518545074648,8.8740962440029,0,0,0,0,9.42558903109666,5.20826089718044,3.58264758783879,1.6194683300949,3.09090681161024,21.6643375781551,19.2716731281293,18.6789727114618,17.664606804832,15.6243797448294,13.0076675775944,21.5769294241613,18.1874101635661,14.8983804829809,6.55016793399575,6.45484683583826,9.47985406160392,21.6478690473995,22.924116604859,14.1575795200403,18.0589496498833,4.49300637906531,12.1474053901818,24.408996213817,28.1243757246501,23.8685860298309,7.83564944297177,6.80862269629368,3.11411124497787,18.3411525637423,26.0741459210101,6.95004303056373,10.2917915447673,1.10483290796269,5.69632297393592,4.85887158517466,2.55125159958052,2.09658645508376,3.81917345898083,3.60424542819615,3.85741408072992,1.42506371870624,3.38158351238453,2.37463399894024,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,1.12101712596307,0,0,0,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0.301150238155546,0.383959833463255,0,0.236777252044017,0,0,0,0,2.43806866313962,18.1089232119982,4.34732710268003,39.0354284575332,41.6110465827788,86.4733718196118,33.4020097761462,163.509316421686,14.5583618432665,48.3370086468389,29.0733140644247,0.327447688744282,3.64295288292542,10.7527488407485,8.76277962867645,16.1940655688319,37.2282289452822,3.57735936458013,1.71598473234038,4.82894751728434,0,0.860234595106124,0,0.56530794192401,2.51699661725944,0.550236083880135,1.25396979922086,0,0,0,1.20848795132744,0,1.46437234528902,0.367663080345869,13.7724131139899,0.17859945656816,0.22452937262617,0.337834441449967,0,0,0.366403487860815,0,0,3.92484646928281,76.5336805610791,23.4266446579473,5.82600395578163,108.997915884549,21.2801029319014,37.0047216093923,18.1473292740498,74.000264525148,3.11211035399766,4.44545217829971,6.70193802765181,7.7192288098915,20.74233328128,1.40592859100278,14.0472034573644,1.71141546463335,5.23070381931304,2.70099346880659,2.42809416552197,2.52811452064047,1.63323337003915,1.10550885580591,3.71972812232756,8.31602000097437,16.5668842616633,6.37112953356618,31.6191982399145,0.168336113954066,0.875829639103749,0.277064115484183,10.0964852802593,11.0335606487647,25.8409461319346,3.62982986112067,170.420153904419,26.0540014358652,21.1931901159562,158.748189828649,23.8051342540794,124.182740301993,29.4064633003912,74.2615861861571,67.7187185870331,132.52773147816,27.8911192886167,13.2549766591426,370.630014587345,55.0106456322916,8.98671139245584,6.95739071387869,6.2731607735892,3.15485054927904,0.121973706129595,0,0.348581828608555,0.829288440122964,0.504641701751257,0,14.0804579096834,5.14592750554308,8.28809528114883,2.78620756819187,2.16563844500876,1.65629520055781,1.68584690078102,1.68707720918437,1.32352767278873,1.74303555273925,1.66089433377768,2.02246962240247,2.94332197688019,0.38474715694639,0,8.41450642820675,11.5240723172792,33.8120036186747,2.53510069643662,0,0.590789906681404,0,0.122988438543114,14.4116960650761,5.1582634142054,3.37205259772859,0.904760751704678,1.20364978706088,0.977424915930974,5.19967392639789,18.7630744632855,1.27523445472584,4.57893907519705,0.721832238805369,0.462985512576611,0.190254152234598,0,0,9.1100292252337,2.57404691653161,16.6466901763376,2.81201501960331,30.9087115885902,3.1190521393325,0.358234090811393,1.16253575405585,4.21720947081732,0,0,0,0,0.12624243342638,0,0,0,3.4214489204541,0.102827492703324,2.10240140490742,0,0.560655421726804,16.1305225468314,2.12681028880755,7.36848779819333,17.8828222925941,60.861798184032,2.12750493267896,2.08014873822732,1.02882949704857,0,4.26275486425759,15.8705572960544,27.1310802695722,18.1112874091769,17.9154901361554,18.4803813346124,36.4297861549377,3.31583314765545,2.61460037580088,6.69819040919782,10.9461402577071,22.6015691144457,21.0833939483032,15.0963658959697,21.8237678084816,1.42636905040718,47.0539246669632,76.2317156661922,64.9991296560821,0,0.197030760201927,0.215627574859517,0.128343036279748,0.254094624222463,0,0.773288812777695,1.17261385734044,0,0,0,0,13.127989613948,17.005797716029,1.35632511849868,34.3151921525832,32.2956469722863,3.15404830067869,5.27136367467209,3.91229929646035,27.2889004867182,21.729344971426,12.6202863721733,30.6052819779227,2.86715927744673,4.50342662164303,12.01001983338,0.413536052245775,6.47142602455851,4.05564719653088,6.97193414326397,6.65741758041988,45.0561537061224,59.0496582608689,36.984335562423,138.646086649938,92.5164657626161,26.0970697024019,77.2098821489316,47.4937812623971,25.5988091712408,34.2694129854335,6.734426793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| ||
|short_description=p3@TGFBI | |short_description=p3@TGFBI | ||
}} | }} |
Latest revision as of 19:22, 24 September 2015
Short description: | p3@TGFBI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TGFBI_5end |
Coexpression cluster: | C295_Fibroblast_Smooth_Myoblast_Chondrocyte_hepatic_Synoviocyte_Preadipocyte |
Association with transcript: | -336bp_to_ENST00000508767_5end |
EntrezGene: | TGFBI |
HGNC: | 11771 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 8.48e-17 | 58 |
myoblast | 8.48e-17 | 58 |
multi-potent skeletal muscle stem cell | 8.48e-17 | 58 |
multi fate stem cell | 9.45e-17 | 427 |
somatic stem cell | 3.24e-16 | 433 |
fibroblast | 4.12e-16 | 76 |
muscle cell | 4.98e-15 | 55 |
stem cell | 1.45e-14 | 441 |
smooth muscle cell | 4.30e-12 | 43 |
smooth muscle myoblast | 4.30e-12 | 43 |
electrically responsive cell | 1.03e-11 | 61 |
electrically active cell | 1.03e-11 | 61 |
vascular associated smooth muscle cell | 3.54e-11 | 32 |
defensive cell | 3.28e-09 | 48 |
phagocyte | 3.28e-09 | 48 |
connective tissue cell | 1.81e-08 | 361 |
monopoietic cell | 1.89e-08 | 59 |
monocyte | 1.89e-08 | 59 |
monoblast | 1.89e-08 | 59 |
promonocyte | 1.89e-08 | 59 |
macrophage dendritic cell progenitor | 2.45e-08 | 61 |
preadipocyte | 6.71e-08 | 12 |
classical monocyte | 7.28e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.28e-08 | 42 |
mesenchymal cell | 1.00e-07 | 354 |
mesodermal cell | 3.05e-07 | 121 |
skin fibroblast | 4.25e-07 | 23 |