FFCP PHASE1:Hg19::chr5:156693159..156693213,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26999 | |EntrezGene=26999 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13760 | |HGNC=13760 | ||
|TSSclassifier=strong | |||
|UniProt=E7EVF4,E5RFQ0,Q96F07 | |UniProt=E7EVF4,E5RFQ0,Q96F07 | ||
|association_with_transcript=0bp_to_ENST00000347377,ENST00000520419,NM_001037332,uc003lwr.2_5end | |association_with_transcript=0bp_to_ENST00000347377,ENST00000520419,NM_001037332,uc003lwr.2_5end | ||
|cluster_id=chr5:156693159..156693213,+ | |||
|description=CAGE_peak_2_at_CYFIP2_5end | |description=CAGE_peak_2_at_CYFIP2_5end | ||
|id=chr5:156693159..156693213,+ | |id=chr5:156693159..156693213,+ | ||
|ontology_enrichment_celltype=CL:0000542!2.94e-27!53;CL:0000051!2.94e-27!53;CL:0000838!1.10e-26!52;CL:0000738!8.88e-25!140;CL:0000988!6.41e-20!182;CL:0000037!1.04e-19!172;CL:0000566!1.04e-19!172;CL:0002087!1.05e-19!119;CL:0002032!3.46e-17!165;CL:0000837!3.46e-17!165;CL:0002031!2.94e-16!124;CL:0000084!4.09e-13!25;CL:0000827!4.09e-13!25;CL:0000945!7.75e-13!24;CL:0000826!7.75e-13!24;CL:0000791!1.55e-11!18;CL:0000789!1.55e-11!18;CL:0002420!1.55e-11!18;CL:0002419!1.55e-11!18;CL:0000790!1.55e-11!18;CL:0000236!1.77e-09!14;CL:0000625!1.68e-07!11 | |ontology_enrichment_celltype=CL:0000542!2.94e-27!53;CL:0000051!2.94e-27!53;CL:0000838!1.10e-26!52;CL:0000738!8.88e-25!140;CL:0000988!6.41e-20!182;CL:0000037!1.04e-19!172;CL:0000566!1.04e-19!172;CL:0002087!1.05e-19!119;CL:0002032!3.46e-17!165;CL:0000837!3.46e-17!165;CL:0002031!2.94e-16!124;CL:0000084!4.09e-13!25;CL:0000827!4.09e-13!25;CL:0000945!7.75e-13!24;CL:0000826!7.75e-13!24;CL:0000791!1.55e-11!18;CL:0000789!1.55e-11!18;CL:0002420!1.55e-11!18;CL:0002419!1.55e-11!18;CL:0000790!1.55e-11!18;CL:0000236!1.77e-09!14;CL:0000625!1.68e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000542;1.96e-17;53!CL:0000084;3.62e-14;25!CL:0000945;7.66e-14;24!CL:0000791;2.03e-12;18!CL:0000789;2.03e-12;18!CL:0002419;2.03e-12;18!CL:0000236;8.44e-10;13!CL:0002087;8.12e-09;104!CL:0000625;5.11e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.77e-29,53;CL:0000051,1.77e-29,53;CL:0000838,7.47e-29,52;CL:0000738,3.50e-28,136;CL:0000037,6.23e-23,168;CL:0002087,6.84e-23,115;CL:0000988,7.32e-23,177;CL:0002032,4.36e-20,161;CL:0000837,4.36e-20,161;CL:0002031,9.10e-19,120;CL:0000084,4.15e-14,25;CL:0000827,4.15e-14,25;CL:0000945,8.31e-14,24;CL:0000826,8.31e-14,24;CL:0000791,2.14e-12,18;CL:0000789,2.14e-12,18;CL:0002420,2.14e-12,18;CL:0002419,2.14e-12,18;CL:0000790,2.14e-12,18;CL:0000236,3.68e-10,14;CL:0000625,5.15e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000051;1.96e-17;53!CL:0000790;2.03e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.93e-21!115;UBERON:0001049!4.26e-17!57;UBERON:0005068!4.26e-17!57;UBERON:0006241!4.26e-17!57;UBERON:0007135!4.26e-17!57;UBERON:0005743!2.49e-16!86;UBERON:0001017!1.63e-15!82;UBERON:0000073!1.84e-15!94;UBERON:0001016!1.84e-15!94;UBERON:0002780!6.78e-15!41;UBERON:0001890!6.78e-15!41;UBERON:0006240!6.78e-15!41;UBERON:0003080!2.01e-14!42;UBERON:0002616!3.46e-14!59;UBERON:0003075!1.13e-13!86;UBERON:0007284!1.13e-13!86;UBERON:0000955!1.56e-13!69;UBERON:0006238!1.56e-13!69;UBERON:0002346!2.28e-13!90;UBERON:0001869!2.55e-12!32;UBERON:0001893!2.76e-12!34;UBERON:0003056!5.49e-12!61;UBERON:0002020!5.98e-12!34;UBERON:0003528!5.98e-12!34;UBERON:0002791!7.72e-12!33;UBERON:0002619!2.14e-10!22;UBERON:0000956!6.84e-10!25;UBERON:0000203!6.84e-10!25;UBERON:0001950!1.62e-09!20;UBERON:0000178!4.20e-08!15;UBERON:0000179!4.20e-08!15;UBERON:0000463!4.20e-08!15;UBERON:0000153!8.98e-08!129;UBERON:0007811!8.98e-08!129 | |ontology_enrichment_uberon=UBERON:0007023!1.93e-21!115;UBERON:0001049!4.26e-17!57;UBERON:0005068!4.26e-17!57;UBERON:0006241!4.26e-17!57;UBERON:0007135!4.26e-17!57;UBERON:0005743!2.49e-16!86;UBERON:0001017!1.63e-15!82;UBERON:0000073!1.84e-15!94;UBERON:0001016!1.84e-15!94;UBERON:0002780!6.78e-15!41;UBERON:0001890!6.78e-15!41;UBERON:0006240!6.78e-15!41;UBERON:0003080!2.01e-14!42;UBERON:0002616!3.46e-14!59;UBERON:0003075!1.13e-13!86;UBERON:0007284!1.13e-13!86;UBERON:0000955!1.56e-13!69;UBERON:0006238!1.56e-13!69;UBERON:0002346!2.28e-13!90;UBERON:0001869!2.55e-12!32;UBERON:0001893!2.76e-12!34;UBERON:0003056!5.49e-12!61;UBERON:0002020!5.98e-12!34;UBERON:0003528!5.98e-12!34;UBERON:0002791!7.72e-12!33;UBERON:0002619!2.14e-10!22;UBERON:0000956!6.84e-10!25;UBERON:0000203!6.84e-10!25;UBERON:0001950!1.62e-09!20;UBERON:0000178!4.20e-08!15;UBERON:0000179!4.20e-08!15;UBERON:0000463!4.20e-08!15;UBERON:0000153!8.98e-08!129;UBERON:0007811!8.98e-08!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;6.55e-12;32!UBERON:0002780;1.18e-11;41!UBERON:0001890;1.18e-11;41!UBERON:0001893;1.69e-11;34!UBERON:0002791;2.77e-11;32!UBERON:0003528;3.52e-11;34!UBERON:0002020;3.52e-11;34!UBERON:0002619;3.81e-11;22!UBERON:0000073;5.47e-11;53!UBERON:0002616;5.47e-11;53!UBERON:0000956;1.87e-10;25!UBERON:0000203;1.87e-10;25!UBERON:0001950;3.39e-10;20!UBERON:0000178;1.12e-08;15!UBERON:0000179;1.12e-08;15!UBERON:0000463;1.12e-08;15!UBERON:0000955;2.13e-07;68!UBERON:0001017;2.70e-07;75!UBERON:0007023;8.69e-07;114 | |||
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| ||
|short_description=p2@CYFIP2 | |short_description=p2@CYFIP2 | ||
}} | }} |
Latest revision as of 13:37, 16 September 2015
Short description: | p2@CYFIP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CYFIP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000347377, ENST00000520419, NM_001037332, uc003lwr.2_5end |
EntrezGene: | CYFIP2 |
HGNC: | 13760 |
UniProt: | E7EVF4E5RFQ0Q96F07 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.77e-29 | 53 |
common lymphoid progenitor | 1.77e-29 | 53 |
lymphoid lineage restricted progenitor cell | 7.47e-29 | 52 |
leukocyte | 3.50e-28 | 136 |
hematopoietic stem cell | 6.23e-23 | 168 |
nongranular leukocyte | 6.84e-23 | 115 |
hematopoietic cell | 7.32e-23 | 177 |
hematopoietic oligopotent progenitor cell | 4.36e-20 | 161 |
hematopoietic multipotent progenitor cell | 4.36e-20 | 161 |
hematopoietic lineage restricted progenitor cell | 9.10e-19 | 120 |
T cell | 4.15e-14 | 25 |
pro-T cell | 4.15e-14 | 25 |
lymphocyte of B lineage | 8.31e-14 | 24 |
pro-B cell | 8.31e-14 | 24 |
mature alpha-beta T cell | 2.14e-12 | 18 |
alpha-beta T cell | 2.14e-12 | 18 |
immature T cell | 2.14e-12 | 18 |
mature T cell | 2.14e-12 | 18 |
immature alpha-beta T cell | 2.14e-12 | 18 |
B cell | 3.68e-10 | 14 |
CD8-positive, alpha-beta T cell | 5.15e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.58e-21 | 114 |
neural tube | 6.75e-19 | 56 |
neural rod | 6.75e-19 | 56 |
future spinal cord | 6.75e-19 | 56 |
neural keel | 6.75e-19 | 56 |
regional part of nervous system | 7.69e-19 | 53 |
regional part of brain | 7.69e-19 | 53 |
central nervous system | 2.60e-17 | 81 |
regional part of forebrain | 4.83e-16 | 41 |
forebrain | 4.83e-16 | 41 |
anterior neural tube | 4.83e-16 | 41 |
future forebrain | 4.83e-16 | 41 |
nervous system | 7.10e-16 | 89 |
neural plate | 2.07e-15 | 82 |
presumptive neural plate | 2.07e-15 | 82 |
brain | 3.61e-15 | 68 |
future brain | 3.61e-15 | 68 |
neurectoderm | 4.96e-15 | 86 |
pre-chordal neural plate | 1.34e-13 | 61 |
cerebral hemisphere | 3.03e-13 | 32 |
telencephalon | 3.31e-13 | 34 |
brain grey matter | 7.65e-13 | 34 |
gray matter | 7.65e-13 | 34 |
regional part of telencephalon | 1.95e-12 | 32 |
regional part of cerebral cortex | 3.72e-11 | 22 |
cerebral cortex | 1.31e-10 | 25 |
pallium | 1.31e-10 | 25 |
neocortex | 3.35e-10 | 20 |
ecto-epithelium | 8.97e-10 | 104 |
blood | 1.15e-08 | 15 |
haemolymphatic fluid | 1.15e-08 | 15 |
organism substance | 1.15e-08 | 15 |