FFCP PHASE1:Hg19::chr6:22146824..22146837,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=401237 | |EntrezGene=401237 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=28245 | |HGNC=28245 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-45bp_to_uc003ndn.2_5end | |association_with_transcript=-45bp_to_uc003ndn.2_5end | ||
|cluster_id=chr6:22146824..22146837,+ | |||
|description=CAGE_peak_5_at_LINC00340_5end | |description=CAGE_peak_5_at_LINC00340_5end | ||
|id=chr6:22146824..22146837,+ | |id=chr6:22146824..22146837,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.41e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;9.91e-28;22!UBERON:0001950;4.99e-26;20!UBERON:0000956;3.42e-24;25!UBERON:0000203;3.42e-24;25!UBERON:0001869;5.30e-22;32!UBERON:0001893;1.02e-21;34!UBERON:0003528;5.35e-21;34!UBERON:0002020;5.35e-21;34!UBERON:0002780;1.21e-20;41!UBERON:0001890;1.21e-20;41!UBERON:0002791;8.34e-19;32!UBERON:0000073;3.13e-15;53!UBERON:0002616;3.13e-15;53!UBERON:0002021;1.71e-13;5!UBERON:0001016;4.44e-13;83!UBERON:0000988;4.61e-13;3!UBERON:0001017;6.35e-13;75!UBERON:0000955;2.15e-11;68!UBERON:0001897;2.83e-09;2!UBERON:0002148;2.83e-09;2!UBERON:0005162;2.83e-09;2!UBERON:0000122;2.83e-09;2!UBERON:0006331;2.83e-09;2!UBERON:0009662;2.83e-09;2!UBERON:0010225;2.83e-09;2!UBERON:0011216;9.58e-07;132!UBERON:0000200;9.59e-07;6!UBERON:0002298;9.59e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.53e-32,56;UBERON:0005068,1.53e-32,56;UBERON:0006241,1.53e-32,56;UBERON:0007135,1.53e-32,56;UBERON:0001016,3.99e-31,89;UBERON:0000073,1.51e-28,53;UBERON:0002616,1.51e-28,53;UBERON:0000955,3.07e-28,68;UBERON:0006238,3.07e-28,68;UBERON:0002619,9.72e-28,22;UBERON:0002780,1.51e-27,41;UBERON:0001890,1.51e-27,41;UBERON:0003080,1.51e-27,41;UBERON:0006240,1.51e-27,41;UBERON:0001017,2.40e-27,81;UBERON:0003528,2.25e-26,34;UBERON:0002020,2.25e-26,34;UBERON:0001893,2.69e-26,34;UBERON:0001950,3.30e-26,20;UBERON:0001869,1.02e-24,32;UBERON:0000956,3.36e-24,25;UBERON:0000203,3.36e-24,25;UBERON:0003075,1.06e-22,82;UBERON:0007284,1.06e-22,82;UBERON:0002791,1.77e-21,32;UBERON:0002346,2.16e-21,86;UBERON:0003056,1.79e-19,61;UBERON:0011216,6.67e-17,223;UBERON:0010371,9.72e-17,104;UBERON:0004121,1.39e-15,171;UBERON:0000924,1.39e-15,171;UBERON:0006601,1.39e-15,171;UBERON:0010314,1.24e-14,132;UBERON:0002021,9.68e-14,5;UBERON:0007023,1.66e-13,114;UBERON:0000988,6.56e-13,3;UBERON:0001897,1.09e-09,2;UBERON:0010225,1.09e-09,2;UBERON:0004111,3.30e-09,240;UBERON:0005162,6.04e-09,2;UBERON:0000122,6.04e-09,2;UBERON:0002148,7.71e-09,2;UBERON:0006331,7.71e-09,2;UBERON:0009662,7.71e-09,2;UBERON:0000025,1.89e-07,192 | |||
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| ||
|short_description=p5@LINC00340 | |short_description=p5@LINC00340 | ||
}} | }} |
Latest revision as of 04:31, 17 September 2015
Short description: | p5@LINC00340 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LINC00340_5end |
Coexpression cluster: | NA |
Association with transcript: | -45bp_to_uc003ndn.2_5end |
EntrezGene: | LINC00340 |
HGNC: | 28245 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data