FFCP PHASE1:Hg19::chr8:30242383..30242394,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11030 | |EntrezGene=11030 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19097 | |HGNC=19097 | ||
|TSSclassifier=strong | |||
|UniProt=B4E3T4 | |UniProt=B4E3T4 | ||
|association_with_transcript=-206bp_to_ENST00000517860_5end | |association_with_transcript=-206bp_to_ENST00000517860_5end | ||
|cluster_id=chr8:30242383..30242394,+ | |||
|description=CAGE_peak_4_at_RBPMS_5end | |description=CAGE_peak_4_at_RBPMS_5end | ||
|id=chr8:30242383..30242394,+ | |id=chr8:30242383..30242394,+ | ||
|ontology_enrichment_celltype=CL:0002321!1.68e-23!248;CL:0000220!1.46e-22!246;CL:0000222!8.50e-21!119;CL:0000055!2.43e-16!180;CL:0000115!3.34e-13!35;CL:0002078!4.44e-13!44;CL:0002139!1.43e-12!24;CL:0000066!4.12e-12!254;CL:0000213!5.11e-11!57;CL:0000215!5.11e-11!57;CL:0000192!1.18e-10!42;CL:0000514!1.18e-10!42;CL:0000183!2.40e-10!59;CL:0000071!7.07e-10!18;CL:0002546!7.07e-10!18;CL:0000359!2.10e-09!32;CL:1000449!2.29e-09!16;CL:0000187!2.79e-09!54;CL:0000057!3.16e-09!75;CL:0000680!6.74e-09!57;CL:0000056!6.74e-09!57;CL:0000355!6.74e-09!57;CL:0000393!9.86e-09!60;CL:0000211!9.86e-09!60;CL:0002681!6.34e-08!13;CL:0002584!6.34e-08!13;CL:1000497!1.11e-07!18;CL:0002518!1.11e-07!18;CL:1000507!5.73e-07!12;CL:1000494!5.73e-07!12 | |ontology_enrichment_celltype=CL:0002321!1.68e-23!248;CL:0000220!1.46e-22!246;CL:0000222!8.50e-21!119;CL:0000055!2.43e-16!180;CL:0000115!3.34e-13!35;CL:0002078!4.44e-13!44;CL:0002139!1.43e-12!24;CL:0000066!4.12e-12!254;CL:0000213!5.11e-11!57;CL:0000215!5.11e-11!57;CL:0000192!1.18e-10!42;CL:0000514!1.18e-10!42;CL:0000183!2.40e-10!59;CL:0000071!7.07e-10!18;CL:0002546!7.07e-10!18;CL:0000359!2.10e-09!32;CL:1000449!2.29e-09!16;CL:0000187!2.79e-09!54;CL:0000057!3.16e-09!75;CL:0000680!6.74e-09!57;CL:0000056!6.74e-09!57;CL:0000355!6.74e-09!57;CL:0000393!9.86e-09!60;CL:0000211!9.86e-09!60;CL:0002681!6.34e-08!13;CL:0002584!6.34e-08!13;CL:1000497!1.11e-07!18;CL:0002518!1.11e-07!18;CL:1000507!5.73e-07!12;CL:1000494!5.73e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002139;3.81e-13;24!CL:0000115;1.56e-12;36!CL:0000071;2.18e-10;18!CL:1000449;1.04e-09;15!CL:0002078;1.65e-09;45!CL:0000359;2.24e-09;32!CL:0000192;2.93e-08;43!CL:0002681;3.03e-08;12!CL:0002584;3.03e-08;12!CL:1000497;4.33e-08;17!CL:0002518;4.33e-08;17!CL:0000213;6.55e-07;58!CL:0000215;6.55e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.26e-21,250;CL:0000222,7.98e-21,121;CL:0000115,6.16e-15,36;CL:0002078,6.12e-14,45;CL:0002139,3.62e-13,24;CL:0000192,4.17e-11,43;CL:0000514,4.17e-11,43;CL:0000213,8.69e-11,58;CL:0000215,8.69e-11,58;CL:0000071,2.51e-10,18;CL:0002546,2.51e-10,18;CL:1000449,1.16e-09,15;CL:0000187,1.35e-09,55;CL:0000359,1.46e-09,32;CL:0000057,2.77e-09,76;CL:0000066,2.80e-09,253;CL:0000680,3.31e-09,58;CL:0000056,3.31e-09,58;CL:0000355,3.31e-09,58;CL:0000393,4.27e-09,61;CL:0000211,4.27e-09,61;CL:0002681,3.82e-08,12;CL:0002584,3.82e-08,12;CL:1000497,5.53e-08,17;CL:0002518,5.53e-08,17 | |||
|ontology_enrichment_development_v019=CL:0002546;2.18e-10;18!CL:0000514;2.93e-08;43!CL:0000222;6.08e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.96e-29!118;UBERON:0000055!6.41e-26!69;UBERON:0002049!7.08e-26!79;UBERON:0007798!7.08e-26!79;UBERON:0004872!6.06e-25!84;UBERON:0001981!7.19e-23!60;UBERON:0007500!7.19e-23!60;UBERON:0004537!7.19e-23!60;UBERON:0006965!7.19e-23!60;UBERON:0005256!3.65e-20!143;UBERON:0002100!1.31e-19!216;UBERON:0000119!2.11e-19!312;UBERON:0000483!1.24e-18!309;UBERON:0001009!3.71e-18!113;UBERON:0000477!2.02e-17!286;UBERON:0004535!2.88e-17!110;UBERON:0004111!5.10e-17!241;UBERON:0000468!1.26e-16!659;UBERON:0003104!9.36e-16!238;UBERON:0009142!9.36e-16!238;UBERON:0001637!1.63e-15!42;UBERON:0003509!1.63e-15!42;UBERON:0004572!1.63e-15!42;UBERON:0000475!1.67e-15!365;UBERON:0000490!4.40e-15!138;UBERON:0000481!3.71e-14!347;UBERON:0000486!4.24e-13!82;UBERON:0000467!5.99e-13!625;UBERON:0003103!6.02e-13!69;UBERON:0000914!7.15e-13!83;UBERON:0002329!7.15e-13!83;UBERON:0003077!7.15e-13!83;UBERON:0003059!7.15e-13!83;UBERON:0007282!7.15e-13!83;UBERON:0009618!7.15e-13!83;UBERON:0007285!7.15e-13!83;UBERON:0000480!1.11e-12!626;UBERON:0004290!5.62e-12!70;UBERON:0000025!4.42e-11!194;UBERON:0004573!8.69e-11!33;UBERON:0004571!8.69e-11!33;UBERON:0004876!4.09e-10!20;UBERON:0001986!7.07e-10!18;UBERON:0004638!7.07e-10!18;UBERON:0004852!7.07e-10!18;UBERON:0009569!8.15e-10!113;UBERON:0001134!1.48e-09!61;UBERON:0002036!1.48e-09!61;UBERON:0003082!1.48e-09!61;UBERON:0000487!1.49e-09!22;UBERON:0000080!1.50e-09!18;UBERON:0002120!1.50e-09!18;UBERON:0004875!1.50e-09!18;UBERON:0005721!1.50e-09!18;UBERON:0005754!1.50e-09!18;UBERON:0007297!1.50e-09!18;UBERON:0002385!2.19e-09!63;UBERON:0001015!2.19e-09!63;UBERON:0000383!2.19e-09!63;UBERON:0004211!2.29e-09!16;UBERON:0001285!2.29e-09!16;UBERON:0007684!2.29e-09!16;UBERON:0003220!2.29e-09!16;UBERON:0004208!2.29e-09!16;UBERON:0006555!2.51e-09!17;UBERON:0005103!2.51e-09!17;UBERON:0000083!2.51e-09!17;UBERON:0009201!2.51e-09!17;UBERON:0004819!2.51e-09!17;UBERON:0006553!2.51e-09!17;UBERON:0003074!2.51e-09!17;UBERON:0003060!2.51e-09!17;UBERON:0000466!2.68e-09!126;UBERON:0006914!3.34e-09!25;UBERON:0003102!6.24e-09!95;UBERON:0000353!6.64e-09!17;UBERON:0002553!7.31e-09!70;UBERON:0000464!9.75e-09!104;UBERON:0003064!1.35e-08!37;UBERON:0003887!2.05e-08!21;UBERON:0001008!2.20e-08!45;UBERON:0000922!2.33e-08!612;UBERON:0003886!3.14e-08!63;UBERON:0000058!3.71e-08!26;UBERON:0000947!5.36e-08!21;UBERON:0010191!5.36e-08!21;UBERON:0001225!6.34e-08!13;UBERON:0008987!6.34e-08!13;UBERON:0006554!6.95e-08!44;UBERON:0000926!8.10e-08!448;UBERON:0004120!8.10e-08!448;UBERON:0006603!8.10e-08!448;UBERON:0007100!2.25e-07!27;UBERON:0001048!3.04e-07!168;UBERON:0009773!5.73e-07!12;UBERON:0001231!5.73e-07!12;UBERON:0004810!5.73e-07!12;UBERON:0000923!7.35e-07!604;UBERON:0005291!7.35e-07!604;UBERON:0006598!7.35e-07!604;UBERON:0002532!7.35e-07!604;UBERON:0002050!7.36e-07!605;UBERON:0005423!7.36e-07!605;UBERON:0002113!9.00e-07!27;UBERON:0003918!9.00e-07!27;UBERON:0005095!9.00e-07!27;UBERON:0007687!9.00e-07!27 | |ontology_enrichment_uberon=UBERON:0003914!1.96e-29!118;UBERON:0000055!6.41e-26!69;UBERON:0002049!7.08e-26!79;UBERON:0007798!7.08e-26!79;UBERON:0004872!6.06e-25!84;UBERON:0001981!7.19e-23!60;UBERON:0007500!7.19e-23!60;UBERON:0004537!7.19e-23!60;UBERON:0006965!7.19e-23!60;UBERON:0005256!3.65e-20!143;UBERON:0002100!1.31e-19!216;UBERON:0000119!2.11e-19!312;UBERON:0000483!1.24e-18!309;UBERON:0001009!3.71e-18!113;UBERON:0000477!2.02e-17!286;UBERON:0004535!2.88e-17!110;UBERON:0004111!5.10e-17!241;UBERON:0000468!1.26e-16!659;UBERON:0003104!9.36e-16!238;UBERON:0009142!9.36e-16!238;UBERON:0001637!1.63e-15!42;UBERON:0003509!1.63e-15!42;UBERON:0004572!1.63e-15!42;UBERON:0000475!1.67e-15!365;UBERON:0000490!4.40e-15!138;UBERON:0000481!3.71e-14!347;UBERON:0000486!4.24e-13!82;UBERON:0000467!5.99e-13!625;UBERON:0003103!6.02e-13!69;UBERON:0000914!7.15e-13!83;UBERON:0002329!7.15e-13!83;UBERON:0003077!7.15e-13!83;UBERON:0003059!7.15e-13!83;UBERON:0007282!7.15e-13!83;UBERON:0009618!7.15e-13!83;UBERON:0007285!7.15e-13!83;UBERON:0000480!1.11e-12!626;UBERON:0004290!5.62e-12!70;UBERON:0000025!4.42e-11!194;UBERON:0004573!8.69e-11!33;UBERON:0004571!8.69e-11!33;UBERON:0004876!4.09e-10!20;UBERON:0001986!7.07e-10!18;UBERON:0004638!7.07e-10!18;UBERON:0004852!7.07e-10!18;UBERON:0009569!8.15e-10!113;UBERON:0001134!1.48e-09!61;UBERON:0002036!1.48e-09!61;UBERON:0003082!1.48e-09!61;UBERON:0000487!1.49e-09!22;UBERON:0000080!1.50e-09!18;UBERON:0002120!1.50e-09!18;UBERON:0004875!1.50e-09!18;UBERON:0005721!1.50e-09!18;UBERON:0005754!1.50e-09!18;UBERON:0007297!1.50e-09!18;UBERON:0002385!2.19e-09!63;UBERON:0001015!2.19e-09!63;UBERON:0000383!2.19e-09!63;UBERON:0004211!2.29e-09!16;UBERON:0001285!2.29e-09!16;UBERON:0007684!2.29e-09!16;UBERON:0003220!2.29e-09!16;UBERON:0004208!2.29e-09!16;UBERON:0006555!2.51e-09!17;UBERON:0005103!2.51e-09!17;UBERON:0000083!2.51e-09!17;UBERON:0009201!2.51e-09!17;UBERON:0004819!2.51e-09!17;UBERON:0006553!2.51e-09!17;UBERON:0003074!2.51e-09!17;UBERON:0003060!2.51e-09!17;UBERON:0000466!2.68e-09!126;UBERON:0006914!3.34e-09!25;UBERON:0003102!6.24e-09!95;UBERON:0000353!6.64e-09!17;UBERON:0002553!7.31e-09!70;UBERON:0000464!9.75e-09!104;UBERON:0003064!1.35e-08!37;UBERON:0003887!2.05e-08!21;UBERON:0001008!2.20e-08!45;UBERON:0000922!2.33e-08!612;UBERON:0003886!3.14e-08!63;UBERON:0000058!3.71e-08!26;UBERON:0000947!5.36e-08!21;UBERON:0010191!5.36e-08!21;UBERON:0001225!6.34e-08!13;UBERON:0008987!6.34e-08!13;UBERON:0006554!6.95e-08!44;UBERON:0000926!8.10e-08!448;UBERON:0004120!8.10e-08!448;UBERON:0006603!8.10e-08!448;UBERON:0007100!2.25e-07!27;UBERON:0001048!3.04e-07!168;UBERON:0009773!5.73e-07!12;UBERON:0001231!5.73e-07!12;UBERON:0004810!5.73e-07!12;UBERON:0000923!7.35e-07!604;UBERON:0005291!7.35e-07!604;UBERON:0006598!7.35e-07!604;UBERON:0002532!7.35e-07!604;UBERON:0002050!7.36e-07!605;UBERON:0005423!7.36e-07!605;UBERON:0002113!9.00e-07!27;UBERON:0003918!9.00e-07!27;UBERON:0005095!9.00e-07!27;UBERON:0007687!9.00e-07!27 | ||
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| ||
|short_description=p4@RBPMS | |short_description=p4@RBPMS | ||
}} | }} |
Latest revision as of 23:21, 17 September 2015
Short description: | p4@RBPMS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RBPMS_5end |
Coexpression cluster: | NA |
Association with transcript: | -206bp_to_ENST00000517860_5end |
EntrezGene: | RBPMS |
HGNC: | 19097 |
UniProt: | B4E3T4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.26e-21 | 250 |
mesodermal cell | 7.98e-21 | 121 |
endothelial cell | 6.16e-15 | 36 |
meso-epithelial cell | 6.12e-14 | 45 |
endothelial cell of vascular tree | 3.62e-13 | 24 |
smooth muscle cell | 4.17e-11 | 43 |
smooth muscle myoblast | 4.17e-11 | 43 |
lining cell | 8.69e-11 | 58 |
barrier cell | 8.69e-11 | 58 |
blood vessel endothelial cell | 2.51e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.51e-10 | 18 |
epithelial cell of nephron | 1.16e-09 | 15 |
muscle cell | 1.35e-09 | 55 |
vascular associated smooth muscle cell | 1.46e-09 | 32 |
fibroblast | 2.77e-09 | 76 |
epithelial cell | 2.80e-09 | 253 |
muscle precursor cell | 3.31e-09 | 58 |
myoblast | 3.31e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.31e-09 | 58 |
electrically responsive cell | 4.27e-09 | 61 |
electrically active cell | 4.27e-09 | 61 |
kidney cortical cell | 3.82e-08 | 12 |
renal cortical epithelial cell | 3.82e-08 | 12 |
kidney cell | 5.53e-08 | 17 |
kidney epithelial cell | 5.53e-08 | 17 |