FFCP PHASE1:Hg19::chr4:176734016..176734025,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2823 | |EntrezGene=2823 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4460 | |HGNC=4460 | ||
|TSSclassifier=strong | |||
|UniProt=P51674 | |UniProt=P51674 | ||
|association_with_transcript=-114bp_to_ENST00000393658_5end | |association_with_transcript=-114bp_to_ENST00000393658_5end | ||
|cluster_id=chr4:176734016..176734025,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_27_at_GPM6A_5end | |description=CAGE_peak_27_at_GPM6A_5end | ||
|id=chr4:176734016..176734025,- | |id=chr4:176734016..176734025,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.25e-11;82!UBERON:0006238;3.84e-10;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!6.09e-78!34;UBERON:0000955!1.99e-77!69;UBERON:0006238!1.99e-77!69;UBERON:0002780!4.87e-76!41;UBERON:0001890!4.87e-76!41;UBERON:0006240!4.87e-76!41;UBERON:0001869!5.60e-76!32;UBERON:0003080!3.78e-74!42;UBERON:0002619!8.82e-74!22;UBERON:0001017!2.79e-73!82;UBERON:0002791!3.48e-73!33;UBERON:0001950!2.44e-72!20;UBERON:0002020!5.66e-71!34;UBERON:0003528!5.66e-71!34;UBERON:0005743!1.14e-69!86;UBERON:0001049!1.14e-67!57;UBERON:0005068!1.14e-67!57;UBERON:0006241!1.14e-67!57;UBERON:0007135!1.14e-67!57;UBERON:0002616!3.17e-65!59;UBERON:0000956!8.16e-65!25;UBERON:0000203!8.16e-65!25;UBERON:0000073!1.26e-62!94;UBERON:0001016!1.26e-62!94;UBERON:0003056!8.32e-50!61;UBERON:0003075!8.93e-47!86;UBERON:0007284!8.93e-47!86;UBERON:0002346!1.84e-44!90;UBERON:0000033!2.71e-44!123;UBERON:0000153!5.61e-42!129;UBERON:0007811!5.61e-42!129;UBERON:0007023!1.53e-39!115;UBERON:0000200!6.27e-34!6;UBERON:0004121!1.46e-32!169;UBERON:0000924!1.12e-31!173;UBERON:0006601!1.12e-31!173;UBERON:0002021!4.18e-27!5;UBERON:0001871!6.93e-25!7;UBERON:0002771!4.93e-18!3;UBERON:0000349!1.23e-17!5;UBERON:0000025!4.59e-16!194;UBERON:0002420!5.79e-15!9;UBERON:0007245!5.79e-15!9;UBERON:0010009!5.79e-15!9;UBERON:0010011!5.79e-15!9;UBERON:0000454!5.79e-15!9;UBERON:0000369!8.59e-13!4;UBERON:0002435!8.59e-13!4;UBERON:0000204!8.59e-13!4;UBERON:0010082!8.59e-13!4;UBERON:0001870!1.91e-12!2;UBERON:0001876!5.84e-12!2;UBERON:0004111!8.21e-12!241;UBERON:0000475!8.32e-11!365;UBERON:0001872!2.90e-10!5;UBERON:0000064!3.47e-10!219;UBERON:0000477!4.95e-10!286;UBERON:0002308!1.11e-09!9;UBERON:0000125!1.11e-09!9;UBERON:0000483!7.70e-09!309;UBERON:0000119!1.07e-08!312;UBERON:0005383!3.41e-08!3;UBERON:0005382!3.41e-08!3;UBERON:0009663!1.65e-07!7;UBERON:0002702!3.13e-07!1;UBERON:0003112!3.32e-07!1;UBERON:0000032!3.32e-07!1;UBERON:0005253!3.32e-07!1;UBERON:0003128!3.32e-07!1;UBERON:0002241!3.32e-07!1;UBERON:0001703!3.32e-07!1;UBERON:0004761!3.32e-07!1;UBERON:0009617!3.32e-07!1;UBERON:0002022!4.43e-07!1;UBERON:0007190!4.97e-07!1;UBERON:0001874!6.24e-07!1;UBERON:0002581!8.27e-07!1 | |ontology_enrichment_uberon=UBERON:0001893!6.09e-78!34;UBERON:0000955!1.99e-77!69;UBERON:0006238!1.99e-77!69;UBERON:0002780!4.87e-76!41;UBERON:0001890!4.87e-76!41;UBERON:0006240!4.87e-76!41;UBERON:0001869!5.60e-76!32;UBERON:0003080!3.78e-74!42;UBERON:0002619!8.82e-74!22;UBERON:0001017!2.79e-73!82;UBERON:0002791!3.48e-73!33;UBERON:0001950!2.44e-72!20;UBERON:0002020!5.66e-71!34;UBERON:0003528!5.66e-71!34;UBERON:0005743!1.14e-69!86;UBERON:0001049!1.14e-67!57;UBERON:0005068!1.14e-67!57;UBERON:0006241!1.14e-67!57;UBERON:0007135!1.14e-67!57;UBERON:0002616!3.17e-65!59;UBERON:0000956!8.16e-65!25;UBERON:0000203!8.16e-65!25;UBERON:0000073!1.26e-62!94;UBERON:0001016!1.26e-62!94;UBERON:0003056!8.32e-50!61;UBERON:0003075!8.93e-47!86;UBERON:0007284!8.93e-47!86;UBERON:0002346!1.84e-44!90;UBERON:0000033!2.71e-44!123;UBERON:0000153!5.61e-42!129;UBERON:0007811!5.61e-42!129;UBERON:0007023!1.53e-39!115;UBERON:0000200!6.27e-34!6;UBERON:0004121!1.46e-32!169;UBERON:0000924!1.12e-31!173;UBERON:0006601!1.12e-31!173;UBERON:0002021!4.18e-27!5;UBERON:0001871!6.93e-25!7;UBERON:0002771!4.93e-18!3;UBERON:0000349!1.23e-17!5;UBERON:0000025!4.59e-16!194;UBERON:0002420!5.79e-15!9;UBERON:0007245!5.79e-15!9;UBERON:0010009!5.79e-15!9;UBERON:0010011!5.79e-15!9;UBERON:0000454!5.79e-15!9;UBERON:0000369!8.59e-13!4;UBERON:0002435!8.59e-13!4;UBERON:0000204!8.59e-13!4;UBERON:0010082!8.59e-13!4;UBERON:0001870!1.91e-12!2;UBERON:0001876!5.84e-12!2;UBERON:0004111!8.21e-12!241;UBERON:0000475!8.32e-11!365;UBERON:0001872!2.90e-10!5;UBERON:0000064!3.47e-10!219;UBERON:0000477!4.95e-10!286;UBERON:0002308!1.11e-09!9;UBERON:0000125!1.11e-09!9;UBERON:0000483!7.70e-09!309;UBERON:0000119!1.07e-08!312;UBERON:0005383!3.41e-08!3;UBERON:0005382!3.41e-08!3;UBERON:0009663!1.65e-07!7;UBERON:0002702!3.13e-07!1;UBERON:0003112!3.32e-07!1;UBERON:0000032!3.32e-07!1;UBERON:0005253!3.32e-07!1;UBERON:0003128!3.32e-07!1;UBERON:0002241!3.32e-07!1;UBERON:0001703!3.32e-07!1;UBERON:0004761!3.32e-07!1;UBERON:0009617!3.32e-07!1;UBERON:0002022!4.43e-07!1;UBERON:0007190!4.97e-07!1;UBERON:0001874!6.24e-07!1;UBERON:0002581!8.27e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.53e-54;20!UBERON:0002619;1.64e-49;22!UBERON:0000200;5.24e-49;6!UBERON:0000956;1.12e-43;25!UBERON:0000203;1.12e-43;25!UBERON:0001869;9.62e-42;32!UBERON:0001893;3.68e-38;34!UBERON:0002791;3.86e-37;32!UBERON:0001870;7.25e-36;3!UBERON:0003528;5.20e-33;34!UBERON:0002020;5.20e-33;34!UBERON:0002771;9.54e-25;2!UBERON:0002702;1.14e-24;2!UBERON:0002780;1.20e-22;41!UBERON:0001890;1.20e-22;41!UBERON:0002021;1.42e-21;5!UBERON:0000955;2.35e-20;68!UBERON:0001017;7.69e-17;75!UBERON:0001871;8.29e-16;6!UBERON:0000073;1.21e-15;53!UBERON:0002616;1.21e-15;53!UBERON:0003112;1.93e-13;1!UBERON:0011158;1.93e-13;1!UBERON:0003128;1.93e-13;1!UBERON:0001703;1.93e-13;1!UBERON:0002241;1.93e-13;1!UBERON:0002022;5.06e-13;1!UBERON:0001874;5.06e-13;1!UBERON:0007190;5.06e-13;1!UBERON:0001016;2.89e-12;83!UBERON:0011216;7.91e-08;132!UBERON:0002360;3.81e-07;2!UBERON:0000094;3.81e-07;2!UBERON:0010743;3.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,4.88e-54,20;UBERON:0000200,2.91e-49,6;UBERON:0002619,2.99e-49,22;UBERON:0001869,4.87e-49,32;UBERON:0001893,3.68e-46,34;UBERON:0000956,1.89e-43,25;UBERON:0000203,1.89e-43,25;UBERON:0002791,3.93e-41,32;UBERON:0003528,1.04e-38,34;UBERON:0002020,1.04e-38,34;UBERON:0002780,3.08e-38,41;UBERON:0001890,3.08e-38,41;UBERON:0003080,3.08e-38,41;UBERON:0006240,3.08e-38,41;UBERON:0001870,1.11e-35,3;UBERON:0000955,1.44e-35,68;UBERON:0006238,1.44e-35,68;UBERON:0001017,4.59e-34,81;UBERON:0001016,1.47e-30,89;UBERON:0000073,2.00e-29,53;UBERON:0002616,2.00e-29,53;UBERON:0001049,8.45e-28,56;UBERON:0005068,8.45e-28,56;UBERON:0006241,8.45e-28,56;UBERON:0007135,8.45e-28,56;UBERON:0003056,1.94e-25,61;UBERON:0002771,6.29e-25,2;UBERON:0002702,9.02e-25,2;UBERON:0002021,2.42e-21,5;UBERON:0003075,1.28e-18,82;UBERON:0007284,1.28e-18,82;UBERON:0002346,1.08e-17,86;UBERON:0001871,9.67e-16,6;UBERON:0007023,1.29e-15,114;UBERON:0004121,2.91e-15,171;UBERON:0000924,2.91e-15,171;UBERON:0006601,2.91e-15,171;UBERON:0010371,2.17e-14,104;UBERON:0003112,2.06e-13,1;UBERON:0011158,2.06e-13,1;UBERON:0003128,2.06e-13,1;UBERON:0001703,2.06e-13,1;UBERON:0002241,2.06e-13,1;UBERON:0004761,2.06e-13,1;UBERON:0009617,2.06e-13,1;UBERON:0002022,3.76e-13,1;UBERON:0010314,4.03e-13,132;UBERON:0007190,4.77e-13,1;UBERON:0011216,6.05e-13,223;UBERON:0001874,7.68e-13,1;UBERON:0005253,2.43e-07,2;UBERON:0002360,2.74e-07,2;UBERON:0000094,2.74e-07,2;UBERON:0010743,2.74e-07,2;UBERON:0000025,4.51e-07,192 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.984685914873589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,1.48428957058962,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.221158519862449,0.295547618953547,1.97446857438575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2029051231617,0,0,0,0,0,0,0,0,0,0,1.9026588850306,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.953423842781029,0,0,0,0,0,1.76173714308272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,3.17268288745104,1.6274820991845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7973596699725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.834979926253974,1.41696576325585,0.478901577171454,1.23069818544453,1.51243017733031,0.138314504928436,2.09918339321406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55336444622308,0,0.826747186004736,0.507326481551255,0,0,0,0,0,0,0,0,0,0,0,0,0,0.986591603442736,0,0,0,1.25692471932802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08786384305464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.984685914873589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,1.48428957058962,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.221158519862449,0.295547618953547,1.97446857438575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2029051231617,0,0,0,0,0,0,0,0,0,0,1.9026588850306,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.953423842781029,0,0,0,0,0,1.76173714308272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,3.17268288745104,1.6274820991845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7973596699725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.834979926253974,1.41696576325585,0.478901577171454,1.23069818544453,1.51243017733031,0.138314504928436,2.09918339321406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55336444622308,0,0.826747186004736,0.507326481551255,0,0,0,0,0,0,0,0,0,0,0,0,0,0.986591603442736,0,0,0,1.25692471932802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08786384305464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p27@GPM6A | |short_description=p27@GPM6A | ||
}} | }} |
Latest revision as of 21:56, 16 September 2015
Short description: | p27@GPM6A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_GPM6A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -114bp_to_ENST00000393658_5end |
EntrezGene: | GPM6A |
HGNC: | 4460 |
UniProt: | P51674 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data