FFCP PHASE1:Hg19::chr9:135753744..135753765,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11092 | |EntrezGene=11092 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1367 | |HGNC=1367 | ||
|TSSclassifier=strong | |||
|UniProt=Q96E40 | |UniProt=Q96E40 | ||
|association_with_transcript=0bp_to_uc004cbx.1_5end | |association_with_transcript=0bp_to_uc004cbx.1_5end | ||
|cluster_id=chr9:135753744..135753765,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_C9orf9_5end | |description=CAGE_peak_2_at_C9orf9_5end | ||
|id=chr9:135753744..135753765,+ | |id=chr9:135753744..135753765,+ | ||
|ontology_enrichment_celltype=CL:0000220!5.01e-07!246 | |ontology_enrichment_celltype=CL:0000220!5.01e-07!246 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!5.94e-22!365;UBERON:0000481!2.59e-17!347;UBERON:0000477!4.26e-17!286;UBERON:0000483!4.36e-17!309;UBERON:0000153!6.47e-17!129;UBERON:0007811!6.47e-17!129;UBERON:0000119!7.30e-17!312;UBERON:0000033!4.26e-16!123;UBERON:0004111!1.34e-14!241;UBERON:0000924!7.41e-14!173;UBERON:0006601!7.41e-14!173;UBERON:0004121!1.57e-13!169;UBERON:0001049!3.35e-13!57;UBERON:0005068!3.35e-13!57;UBERON:0006241!3.35e-13!57;UBERON:0007135!3.35e-13!57;UBERON:0000955!3.74e-13!69;UBERON:0006238!3.74e-13!69;UBERON:0002346!5.07e-13!90;UBERON:0003075!8.78e-13!86;UBERON:0007284!8.78e-13!86;UBERON:0000025!1.11e-12!194;UBERON:0000073!1.03e-11!94;UBERON:0001016!1.03e-11!94;UBERON:0005743!1.18e-11!86;UBERON:0001017!1.95e-11!82;UBERON:0002616!3.18e-11!59;UBERON:0000064!1.81e-10!219;UBERON:0003056!3.56e-09!61;UBERON:0000468!6.29e-09!659;UBERON:0002780!6.52e-09!41;UBERON:0001890!6.52e-09!41;UBERON:0006240!6.52e-09!41;UBERON:0002050!1.47e-08!605;UBERON:0005423!1.47e-08!605;UBERON:0000923!2.02e-08!604;UBERON:0005291!2.02e-08!604;UBERON:0006598!2.02e-08!604;UBERON:0002532!2.02e-08!604;UBERON:0003080!2.67e-08!42;UBERON:0000467!4.82e-08!625;UBERON:0000922!6.83e-08!612;UBERON:0000480!6.84e-08!626;UBERON:0001893!2.36e-07!34;UBERON:0002020!2.76e-07!34;UBERON:0003528!2.76e-07!34;UBERON:0002791!6.18e-07!33;UBERON:0001869!7.50e-07!32 | |ontology_enrichment_uberon=UBERON:0000475!5.94e-22!365;UBERON:0000481!2.59e-17!347;UBERON:0000477!4.26e-17!286;UBERON:0000483!4.36e-17!309;UBERON:0000153!6.47e-17!129;UBERON:0007811!6.47e-17!129;UBERON:0000119!7.30e-17!312;UBERON:0000033!4.26e-16!123;UBERON:0004111!1.34e-14!241;UBERON:0000924!7.41e-14!173;UBERON:0006601!7.41e-14!173;UBERON:0004121!1.57e-13!169;UBERON:0001049!3.35e-13!57;UBERON:0005068!3.35e-13!57;UBERON:0006241!3.35e-13!57;UBERON:0007135!3.35e-13!57;UBERON:0000955!3.74e-13!69;UBERON:0006238!3.74e-13!69;UBERON:0002346!5.07e-13!90;UBERON:0003075!8.78e-13!86;UBERON:0007284!8.78e-13!86;UBERON:0000025!1.11e-12!194;UBERON:0000073!1.03e-11!94;UBERON:0001016!1.03e-11!94;UBERON:0005743!1.18e-11!86;UBERON:0001017!1.95e-11!82;UBERON:0002616!3.18e-11!59;UBERON:0000064!1.81e-10!219;UBERON:0003056!3.56e-09!61;UBERON:0000468!6.29e-09!659;UBERON:0002780!6.52e-09!41;UBERON:0001890!6.52e-09!41;UBERON:0006240!6.52e-09!41;UBERON:0002050!1.47e-08!605;UBERON:0005423!1.47e-08!605;UBERON:0000923!2.02e-08!604;UBERON:0005291!2.02e-08!604;UBERON:0006598!2.02e-08!604;UBERON:0002532!2.02e-08!604;UBERON:0003080!2.67e-08!42;UBERON:0000467!4.82e-08!625;UBERON:0000922!6.83e-08!612;UBERON:0000480!6.84e-08!626;UBERON:0001893!2.36e-07!34;UBERON:0002020!2.76e-07!34;UBERON:0003528!2.76e-07!34;UBERON:0002791!6.18e-07!33;UBERON:0001869!7.50e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.73e-07;53!UBERON:0002616;2.73e-07;53!UBERON:0002780;5.64e-07;41!UBERON:0001890;5.64e-07;41!UBERON:0000955;8.33e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000483,2.07e-17,306;UBERON:0000119,3.52e-17,309;UBERON:0010371,8.27e-15,104;UBERON:0004121,1.20e-14,171;UBERON:0000924,1.20e-14,171;UBERON:0006601,1.20e-14,171;UBERON:0004111,1.41e-14,240;UBERON:0002346,2.00e-14,86;UBERON:0003075,3.29e-14,82;UBERON:0007284,3.29e-14,82;UBERON:0001049,6.39e-14,56;UBERON:0005068,6.39e-14,56;UBERON:0006241,6.39e-14,56;UBERON:0007135,6.39e-14,56;UBERON:0000955,1.19e-13,68;UBERON:0006238,1.19e-13,68;UBERON:0000073,6.01e-13,53;UBERON:0002616,6.01e-13,53;UBERON:0010314,1.11e-12,132;UBERON:0000025,1.20e-12,192;UBERON:0001017,5.28e-12,81;UBERON:0001016,5.45e-12,89;UBERON:0003056,3.56e-10,61;UBERON:0011216,5.45e-10,223;UBERON:0002780,7.01e-09,41;UBERON:0001890,7.01e-09,41;UBERON:0003080,7.01e-09,41;UBERON:0006240,7.01e-09,41;UBERON:0001893,2.63e-07,34;UBERON:0003528,3.08e-07,34;UBERON:0002020,3.08e-07,34;UBERON:0000922,8.33e-07,592;UBERON:0001869,8.43e-07,32 | |||
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| ||
|short_description=p2@C9orf9 | |short_description=p2@C9orf9 | ||
}} | }} |
Latest revision as of 04:48, 16 September 2015
Short description: | p2@C9orf9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C9orf9_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_uc004cbx.1_5end |
EntrezGene: | C9orf9 |
HGNC: | 1367 |
UniProt: | Q96E40 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelium | 2.07e-17 | 306 |
cell layer | 3.52e-17 | 309 |
ecto-epithelium | 8.27e-15 | 104 |
ectoderm-derived structure | 1.20e-14 | 171 |
ectoderm | 1.20e-14 | 171 |
presumptive ectoderm | 1.20e-14 | 171 |
anatomical conduit | 1.41e-14 | 240 |
neurectoderm | 2.00e-14 | 86 |
neural plate | 3.29e-14 | 82 |
presumptive neural plate | 3.29e-14 | 82 |
neural tube | 6.39e-14 | 56 |
neural rod | 6.39e-14 | 56 |
future spinal cord | 6.39e-14 | 56 |
neural keel | 6.39e-14 | 56 |
brain | 1.19e-13 | 68 |
future brain | 1.19e-13 | 68 |
regional part of nervous system | 6.01e-13 | 53 |
regional part of brain | 6.01e-13 | 53 |
structure with developmental contribution from neural crest | 1.11e-12 | 132 |
tube | 1.20e-12 | 192 |
central nervous system | 5.28e-12 | 81 |
nervous system | 5.45e-12 | 89 |
pre-chordal neural plate | 3.56e-10 | 61 |
organ system subdivision | 5.45e-10 | 223 |
regional part of forebrain | 7.01e-09 | 41 |
forebrain | 7.01e-09 | 41 |
anterior neural tube | 7.01e-09 | 41 |
future forebrain | 7.01e-09 | 41 |
telencephalon | 2.63e-07 | 34 |
brain grey matter | 3.08e-07 | 34 |
gray matter | 3.08e-07 | 34 |
embryo | 8.33e-07 | 592 |
cerebral hemisphere | 8.43e-07 | 32 |