FFCP PHASE1:Hg19::chr1:239593098..239593102,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:239593098..239593102,+ | |||
|description=CAGE_peak_at_chr1:239593098..239593102,+ | |description=CAGE_peak_at_chr1:239593098..239593102,+ | ||
|id=chr1:239593098..239593102,+ | |id=chr1:239593098..239593102,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005754;4.65e-10;1!UBERON:0006298;1.42e-09;1!UBERON:0008801;1.42e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!3.84e-30!20;UBERON:0001869!4.78e-30!32;UBERON:0002619!7.39e-30!22;UBERON:0007023!9.60e-30!115;UBERON:0001017!4.22e-28!82;UBERON:0001893!7.83e-28!34;UBERON:0005743!9.74e-28!86;UBERON:0002020!1.41e-27!34;UBERON:0003528!1.41e-27!34;UBERON:0000073!1.31e-26!94;UBERON:0001016!1.31e-26!94;UBERON:0002791!1.74e-26!33;UBERON:0000956!1.32e-25!25;UBERON:0000203!1.32e-25!25;UBERON:0000955!9.00e-24!69;UBERON:0006238!9.00e-24!69;UBERON:0002780!1.82e-23!41;UBERON:0001890!1.82e-23!41;UBERON:0006240!1.82e-23!41;UBERON:0001049!7.13e-23!57;UBERON:0005068!7.13e-23!57;UBERON:0006241!7.13e-23!57;UBERON:0007135!7.13e-23!57;UBERON:0003080!1.02e-22!42;UBERON:0002616!1.10e-18!59;UBERON:0003075!2.21e-18!86;UBERON:0007284!2.21e-18!86;UBERON:0003056!2.86e-18!61;UBERON:0002346!4.02e-18!90;UBERON:0000033!8.33e-16!123;UBERON:0000153!2.29e-15!129;UBERON:0007811!2.29e-15!129;UBERON:0000924!2.56e-14!173;UBERON:0006601!2.56e-14!173;UBERON:0004121!2.83e-14!169;UBERON:0001871!1.42e-10!7;UBERON:0000200!1.75e-10!6;UBERON:0002021!1.00e-09!5;UBERON:0001872!7.62e-09!5;UBERON:0000922!2.76e-07!612;UBERON:0000481!3.90e-07!347 | |ontology_enrichment_uberon=UBERON:0001950!3.84e-30!20;UBERON:0001869!4.78e-30!32;UBERON:0002619!7.39e-30!22;UBERON:0007023!9.60e-30!115;UBERON:0001017!4.22e-28!82;UBERON:0001893!7.83e-28!34;UBERON:0005743!9.74e-28!86;UBERON:0002020!1.41e-27!34;UBERON:0003528!1.41e-27!34;UBERON:0000073!1.31e-26!94;UBERON:0001016!1.31e-26!94;UBERON:0002791!1.74e-26!33;UBERON:0000956!1.32e-25!25;UBERON:0000203!1.32e-25!25;UBERON:0000955!9.00e-24!69;UBERON:0006238!9.00e-24!69;UBERON:0002780!1.82e-23!41;UBERON:0001890!1.82e-23!41;UBERON:0006240!1.82e-23!41;UBERON:0001049!7.13e-23!57;UBERON:0005068!7.13e-23!57;UBERON:0006241!7.13e-23!57;UBERON:0007135!7.13e-23!57;UBERON:0003080!1.02e-22!42;UBERON:0002616!1.10e-18!59;UBERON:0003075!2.21e-18!86;UBERON:0007284!2.21e-18!86;UBERON:0003056!2.86e-18!61;UBERON:0002346!4.02e-18!90;UBERON:0000033!8.33e-16!123;UBERON:0000153!2.29e-15!129;UBERON:0007811!2.29e-15!129;UBERON:0000924!2.56e-14!173;UBERON:0006601!2.56e-14!173;UBERON:0004121!2.83e-14!169;UBERON:0001871!1.42e-10!7;UBERON:0000200!1.75e-10!6;UBERON:0002021!1.00e-09!5;UBERON:0001872!7.62e-09!5;UBERON:0000922!2.76e-07!612;UBERON:0000481!3.90e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0002021;1.74e-26;5!UBERON:0001950;3.76e-24;20!UBERON:0002619;5.74e-22;22!UBERON:0000956;2.54e-19;25!UBERON:0000203;2.54e-19;25!UBERON:0001829;2.04e-17;2!UBERON:0002791;3.24e-17;32!UBERON:0001869;4.18e-17;32!UBERON:0003528;2.09e-15;34!UBERON:0002020;2.09e-15;34!UBERON:0001893;1.62e-14;34!UBERON:0001044;4.30e-13;6!UBERON:0003293;4.30e-13;6!UBERON:0003294;4.30e-13;6!UBERON:0010047;4.30e-13;6!UBERON:0003408;4.30e-13;6!UBERON:0000167;4.30e-13;6!UBERON:0006947;1.44e-12;3!UBERON:0004054;1.44e-12;3!UBERON:0002114;1.76e-12;2!UBERON:0002780;1.12e-11;41!UBERON:0001890;1.12e-11;41!UBERON:0001000;4.65e-10;1!UBERON:0000998;4.65e-10;1!UBERON:0006868;4.65e-10;1!UBERON:0005352;4.65e-10;1!UBERON:0005904;1.20e-09;4!UBERON:0003112;1.42e-09;1!UBERON:0001831;1.42e-09;1!UBERON:0001736;1.42e-09;1!UBERON:0000996;1.42e-09;1!UBERON:0011158;1.42e-09;1!UBERON:0003128;1.42e-09;1!UBERON:0001567;1.42e-09;1!UBERON:0001703;1.42e-09;1!UBERON:0002241;1.42e-09;1!UBERON:0002108;7.84e-08;4!UBERON:0001872;1.66e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.43e-26,5;UBERON:0001950,2.40e-24,20;UBERON:0002619,3.82e-22,22;UBERON:0000956,1.78e-19,25;UBERON:0000203,1.78e-19,25;UBERON:0002791,3.74e-19,32;UBERON:0001869,3.74e-19,32;UBERON:0003528,5.50e-18,34;UBERON:0002020,5.50e-18,34;UBERON:0001893,5.50e-18,34;UBERON:0001829,8.80e-18,2;UBERON:0002780,8.94e-15,41;UBERON:0001890,8.94e-15,41;UBERON:0003080,8.94e-15,41;UBERON:0006240,8.94e-15,41;UBERON:0007023,6.86e-14,114;UBERON:0001044,2.73e-13,6;UBERON:0003293,2.73e-13,6;UBERON:0003294,2.73e-13,6;UBERON:0010047,2.73e-13,6;UBERON:0000167,2.73e-13,6;UBERON:0006947,1.36e-12,3;UBERON:0004054,1.36e-12,3;UBERON:0002114,2.03e-12,2;UBERON:0000073,3.34e-11,53;UBERON:0002616,3.34e-11,53;UBERON:0001049,1.52e-10,56;UBERON:0005068,1.52e-10,56;UBERON:0006241,1.52e-10,56;UBERON:0007135,1.52e-10,56;UBERON:0001000,4.09e-10,1;UBERON:0005352,4.09e-10,1;UBERON:0000998,4.87e-10,1;UBERON:0006868,4.87e-10,1;UBERON:0001736,7.50e-10,1;UBERON:0006298,7.50e-10,1;UBERON:0001831,1.15e-09,1;UBERON:0001567,1.15e-09,1;UBERON:0008801,1.15e-09,1;UBERON:0005904,1.15e-09,4;UBERON:0003056,1.37e-09,61;UBERON:0000996,1.76e-09,1;UBERON:0003112,1.91e-09,1;UBERON:0011158,1.91e-09,1;UBERON:0003128,1.91e-09,1;UBERON:0001703,1.91e-09,1;UBERON:0002241,1.91e-09,1;UBERON:0004761,1.91e-09,1;UBERON:0009617,1.91e-09,1;UBERON:0000955,2.41e-08,68;UBERON:0006238,2.41e-08,68;UBERON:0003408,3.55e-08,10;UBERON:0002108,8.53e-08,4;UBERON:0011216,1.29e-07,223;UBERON:0001872,1.41e-07,5;UBERON:0001017,7.83e-07,81;UBERON:0003075,7.83e-07,82;UBERON:0007284,7.83e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2700414963433,0,0,0,0,0,0.677167111206413,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.703347082052564,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0.493217028184668,0,0,0.969332746095218,0.371072392647405,0,0,0,0,0,0,0,0.689486746482929,0,0,1.77148277162768,0,0,0,0,0.658156191461918,0.435753854075961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0.296521128680622,0,0.104421949505455,0,0,0,0,0.19566461893209,0,3.94584402849391,7.25944296291983,0,0.126373159256976,0.751617097072463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0.353024506766001,0.225980740780532,0,0,0.50648636764703,0.391102765469606,0,0,0,0,0.458146384663663,0,0,0,0,0.407712618220842,0.104602846312333,0,0,0,0.273810757783986,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0.160753148465019,0,0.415440338029185,0,0,0.364497339948148,0,0.315222829196793,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0.886068179966986,0.732157589411779,0.500763722825999,0,0.110929051536852,0.0620964029413835,0.691743174681154,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.176689145945881,0,0,0,0,0,1.7973596699725,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.982886743728125,0,0,0.123935764259002,0,0,0,0,0,0,0.578063025868136,1.41696576325585,1.43670473151436,1.43581454968528,1.76450187355203,0.345786262321089,1.29180516505481,0,0,0.589848616738702,0,0,0,0,0,0,0,2.34454203369928,0,0,0,0.472763092328763,0.781078098613847,1.65349437200947,0.19024743058172,1.64092442705466,1.64477330057155,0.496211178389294,0,0.127762427639595,0,0,0,0,0,0,0,0.0679697329768317,0.131545547125698,0,0.444925607568277,0.39246546425257,0.157115589916002,0,0.913158720509496,0,0.47775168788705,0.500335809236594,0.47404083519818,0,0.347716544605159,0,0,0,0,2.58136415292167,0,0,3.38709640152743,0.22910686854405,0,0,0,0,0.121917924982269,0,0,1.1598144313382,0,0,0,0.118920090777569,1.24240690242856,0,0.150962843566674,0.154348316215889,0.218559560503957,0,3.43207650455468,0,0.196308467114945,0,0.8453114551668,0,0,0,0,0,0,0,0,1.83491713361816,0,0,0.0679914901909147,3.05445483238264,2.1161073620616,0,0,0,0.126166424835079,0,0.126698501011437,0,0,0.0918948995348449,0.250707539292375,0,0,0,0.103432995861895,0,0.23806443146374,0,0,0.33639558774184,0,0.404234377916439,0,0,0,0.0717222053926763,0.665320713092027,0,0,0,0,0,0.244482888365733,0.406896178315738,1.33151354837103,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2700414963433,0,0,0,0,0,0.677167111206413,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.703347082052564,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0.493217028184668,0,0,0.969332746095218,0.371072392647405,0,0,0,0,0,0,0,0.689486746482929,0,0,1.77148277162768,0,0,0,0,0.658156191461918,0.435753854075961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0.296521128680622,0,0.104421949505455,0,0,0,0,0.19566461893209,0,3.94584402849391,7.25944296291983,0,0.126373159256976,0.751617097072463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0.353024506766001,0.225980740780532,0,0,0.50648636764703,0.391102765469606,0,0,0,0,0.458146384663663,0,0,0,0,0.407712618220842,0.104602846312333,0,0,0,0.273810757783986,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0.160753148465019,0,0.415440338029185,0,0,0.364497339948148,0,0.315222829196793,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0.886068179966986,0.732157589411779,0.500763722825999,0,0.110929051536852,0.0620964029413835,0.691743174681154,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.176689145945881,0,0,0,0,0,1.7973596699725,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.982886743728125,0,0,0.123935764259002,0,0,0,0,0,0,0.578063025868136,1.41696576325585,1.43670473151436,1.43581454968528,1.76450187355203,0.345786262321089,1.29180516505481,0,0,0.589848616738702,0,0,0,0,0,0,0,2.34454203369928,0,0,0,0.472763092328763,0.781078098613847,1.65349437200947,0.19024743058172,1.64092442705466,1.64477330057155,0.496211178389294,0,0.127762427639595,0,0,0,0,0,0,0,0.0679697329768317,0.131545547125698,0,0.444925607568277,0.39246546425257,0.157115589916002,0,0.913158720509496,0,0.47775168788705,0.500335809236594,0.47404083519818,0,0.347716544605159,0,0,0,0,2.58136415292167,0,0,3.38709640152743,0.22910686854405,0,0,0,0,0.121917924982269,0,0,1.1598144313382,0,0,0,0.118920090777569,1.24240690242856,0,0.150962843566674,0.154348316215889,0.218559560503957,0,3.43207650455468,0,0.196308467114945,0,0.8453114551668,0,0,0,0,0,0,0,0,1.83491713361816,0,0,0.0679914901909147,3.05445483238264,2.1161073620616,0,0,0,0.126166424835079,0,0.126698501011437,0,0,0.0918948995348449,0.250707539292375,0,0,0,0.103432995861895,0,0.23806443146374,0,0,0.33639558774184,0,0.404234377916439,0,0,0,0.0717222053926763,0.665320713092027,0,0,0,0,0,0.244482888365733,0.406896178315738,1.33151354837103,0,0 | ||
|short_description=p@chr1:239593098..239593102,+ | |short_description=p@chr1:239593098..239593102,+ | ||
}} | }} |
Latest revision as of 05:37, 28 July 2015
Short description: | p@chr1:239593098..239593102, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:239593098..239593102, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data