FF:11837-124H1: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00004788 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008567;DRR009439;DRZ000864;DRZ002249;DRZ012214;DRZ013599 | ||
|ancestors_in_disease_facet=DOID: | |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000992,UBERON:0000991,UBERON:0002384,UBERON:0003134,UBERON:0000479,UBERON:0005156,UBERON:0000466,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003133,UBERON:0002323,UBERON:0000464,UBERON:0004458,UBERON:0010317,UBERON:0002118,UBERON:0003100,UBERON:0000474 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0000034 | |||
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:14566,DOID:193,DOID:2394,DOID:120 | |||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000272,FF:0000275 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr2:176969228..176969260,+!p1@HOXD11!1.29!18.31!HOXD11;;chr2:19558373..19558392,-!p1@OSR1!1.26!46.18!OSR1;;chr8:55370487..55370503,+!p1@SOX17!1.21!15.13!SOX17;;chr15:96869255..96869291,+!p6@NR2F2!1.20!26.67!NR2F2;;chr11:46299199..46299233,+!p1@CREB3L1!1.17!71.26!CREB3L1;;chr2:176969179..176969226,+!p2@HOXD11!1.15!13.14!HOXD11;;chr3:25470156..25470227,+!p2@RARB!1.14!12.74!RARB;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.14!12.74!HOXC5;;chr3:25469724..25469773,+!p1@RARB!1.13!17.91!RARB;;chr19:46801639..46801699,+!p1@HIF3A!1.13!12.34!HIF3A;;chr15:96869222..96869251,+!p18@NR2F2!1.11!13.93!NR2F2;;chr3:141087393..141087426,+!p3@ZBTB38!1.10!45.78!ZBTB38;;chr12:66218255..66218304,+!p3@HMGA2!1.09!30.65!HMGA2;;chr8:106330656..106330684,+!p1@ZFPM2!1.08!29.06!ZFPM2;;chr12:66218598..66218645,+!p2@HMGA2!1.07!50.16!HMGA2;;chr7:27224842..27224872,-!p1@HOXA11!1.06!10.35!HOXA11;;chr19:42636586..42636607,-!p1@POU2F2!1.05!28.26!POU2F2;;chr14:62162285..62162296,+!p3@HIF1A!1.04!52.55!HIF1A;;chr7:1577899..1577943,+!p3@MAFK!1.04!9.95!MAFK;;chr11:61520075..61520136,+!p1@C11orf9!1.03!20.70!C11orf9;;chr17:1959369..1959388,+!p2@HIC1!1.02!25.08!HIC1;;chr7:44143978..44143989,+!p2@AEBP1!1.02!17.52!AEBP1;;chr11:46299539..46299620,+!p2@CREB3L1!1.00!15.53!CREB3L1;;chr18:19749386..19749404,+!p2@GATA6!1.00!13.14!GATA6;;chr10:63809106..63809127,+!p1@ARID5B!0.99!121.42!ARID5B;;chr10:64576105..64576133,-!p1@EGR2!0.99!18.31!EGR2;;chr4:174450089..174450153,-!p2@HAND2!0.99!8.76!HAND2;;chr12:66218836..66218888,+!p1@HMGA2!0.98!81.61!HMGA2;;chr6:106534192..106534224,+!p1@PRDM1!0.98!24.68!PRDM1;;chr7:44143925..44143970,+!p1@AEBP1!0.97!192.28!AEBP1;;chr16:86544113..86544145,+!p1@FOXF1!0.97!10.35!FOXF1;;chr3:25469815..25469866,+!p3@RARB!0.97!8.36!RARB;;chr2:208030647..208030689,-!p1@KLF7!0.96!69.27!KLF7;;chr14:62162258..62162269,+!p2@HIF1A!0.95!78.03!HIF1A;;chr12:80085061..80085119,-!p6@PAWR!0.95!12.74!PAWR;;chr15:96869114..96869160,+!p11@NR2F2!0.94!10.75!NR2F2;;chr19:45971246..45971265,+!p1@FOSB!0.93!144.51!FOSB;;chr7:27224795..27224840,-!p2@HOXA11!0.93!7.56!HOXA11;;chr7:26191809..26191890,+!p1@NFE2L3!0.91!37.02!NFE2L3;;chr3:101546827..101546847,+!p2@NFKBIZ!0.91!10.35!NFKBIZ;;chr7:44143997..44144008,+!p3@AEBP1!0.91!9.16!AEBP1;;chr18:19749541..19749557,+!p1@GATA6!0.90!22.69!GATA6;;chr20:50179368..50179392,-!p2@NFATC2!0.90!9.16!NFATC2;;chr8:106330696..106330719,+!p2@ZFPM2!0.89!8.76!ZFPM2;;chr12:115121962..115121987,-!p1@TBX3!0.87!56.93!TBX3;;chr8:11561684..11561751,+!p1@GATA4!0.87!6.37!GATA4;;chr4:174451370..174451387,-!p1@HAND2!0.87!6.37!HAND2;;chr17:1958388..1958404,+!p1@HIC1!0.86!41.80!HIC1;;chr1:170632285..170632309,+!p1@PRRX1!0.86!7.17!PRRX1;;chr5:72744445..72744466,-!p2@FOXD1!0.85!10.35!FOXD1;;chr3:141121847..141121868,+!p5@ZBTB38!0.85!9.55!ZBTB38;;chr20:55204351..55204377,+!p1@TFAP2C!0.85!7.96!TFAP2C;;chr12:54402745..54402788,+!p1@HOXC8!0.84!5.97!HOXC8;;chr12:66218904..66218913,+!p11@HMGA2!0.84!5.97!HMGA2;;chr15:96869206..96869220,+!p21@NR2F2!0.84!5.97!NR2F2;;chr2:177001290..177001315,+!p1@HOXD3!0.84!5.97!HOXD3;;chr3:138665937..138665968,-!p1@FOXL2!0.84!5.97!FOXL2;;chr15:96874145..96874166,+!p7@NR2F2!0.83!11.54!NR2F2;;chr14:62203595..62203676,+!p4@HIF1A!0.83!11.15!HIF1A;;chr1:170632959..170632987,+!p4@PRRX1!0.83!6.37!PRRX1;;chr15:96876966..96877017,+!p12@NR2F2!0.82!8.36!NR2F2;;chr1:151032860..151032918,+!p1@MLLT11!0.81!70.46!MLLT11;;chr21:36260295..36260310,-!p3@RUNX1!0.81!9.16!RUNX1;;chr15:96874216..96874236,+!p13@NR2F2!0.81!8.76!NR2F2;;chr17:41622925..41622976,-!p3@ETV4!0.81!8.36!ETV4;;chr11:65687362..65687436,+!p3@DRAP1!0.80!26.27!DRAP1;;chr6:106534230..106534254,+!p2@PRDM1!0.79!13.93!PRDM1;;chr15:96874244..96874259,+!p5@NR2F2!0.79!13.14!NR2F2;;chr10:119303078..119303169,+!p2@EMX2!0.79!5.18!EMX2;;chr12:54393880..54393962,+!p1@HOXC9!0.79!5.18!HOXC9;;chr19:45908292..45908374,-!p1@PPP1R13L!0.78!48.57!PPP1R13L;;chr17:59477233..59477263,+!p1@TBX2!0.78!16.72!TBX2;;chr8:72756063..72756125,-!p1@MSC!0.78!10.75!MSC;;chr11:65686802..65686818,+!p6@DRAP1!0.78!9.16!DRAP1;;chr6:106546808..106546833,+!p3@PRDM1!0.77!6.37!PRDM1;;chr12:124873357..124873401,-!p1@NCOR2!0.76!61.31!NCOR2;;chr22:38598086..38598105,+!p1@MAFF!0.76!55.34!MAFF;;chr21:36259445..36259519,-!p4@RUNX1!0.76!14.33!RUNX1;;chr15:96869292..96869320,+!p15@NR2F2!0.76!7.17!NR2F2;;chr12:66218212..66218244,+!p5@HMGA2!0.76!7.17!HMGA2;;chr12:54447637..54447659,+!p4@HOXC4!0.76!4.78!HOXC4;;chr6:134210243..134210257,+!p1@TCF21!0.76!4.78!TCF21;;chr3:138665969..138665993,-!p2@FOXL2!0.76!4.78!FOXL2;;chr15:96869165..96869183,+!p20@NR2F2!0.76!4.78!NR2F2;;chr17:41739283..41739297,-!p1@MEOX1!0.76!4.78!MEOX1;;chr10:63809077..63809089,+!p5@ARID5B!0.75!10.75!ARID5B;;chr14:62213827..62213853,+!p6@HIF1A!0.75!6.77!HIF1A;;chr5:72743793..72743855,-!p4@FOXD1!0.75!5.57!FOXD1;;chr11:120107344..120107351,+!p1@POU2F3!0.74!5.57!POU2F3;;chr8:72756267..72756296,-!p4@MSC!0.73!6.77!MSC;;chr5:139492456..139492489,+!p7@PURA!0.73!4.38!PURA;;chr19:47523058..47523114,+!p1@NPAS1!0.73!4.38!NPAS1;;c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| |expression_enrichment_score=chr2:176969228..176969260,+!p1@HOXD11!1.29!18.31!HOXD11;;chr2:19558373..19558392,-!p1@OSR1!1.26!46.18!OSR1;;chr8:55370487..55370503,+!p1@SOX17!1.21!15.13!SOX17;;chr15:96869255..96869291,+!p6@NR2F2!1.20!26.67!NR2F2;;chr11:46299199..46299233,+!p1@CREB3L1!1.17!71.26!CREB3L1;;chr2:176969179..176969226,+!p2@HOXD11!1.15!13.14!HOXD11;;chr3:25470156..25470227,+!p2@RARB!1.14!12.74!RARB;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.14!12.74!HOXC5;;chr3:25469724..25469773,+!p1@RARB!1.13!17.91!RARB;;chr19:46801639..46801699,+!p1@HIF3A!1.13!12.34!HIF3A;;chr15:96869222..96869251,+!p18@NR2F2!1.11!13.93!NR2F2;;chr3:141087393..141087426,+!p3@ZBTB38!1.10!45.78!ZBTB38;;chr12:66218255..66218304,+!p3@HMGA2!1.09!30.65!HMGA2;;chr8:106330656..106330684,+!p1@ZFPM2!1.08!29.06!ZFPM2;;chr12:66218598..66218645,+!p2@HMGA2!1.07!50.16!HMGA2;;chr7:27224842..27224872,-!p1@HOXA11!1.06!10.35!HOXA11;;chr19:42636586..42636607,-!p1@POU2F2!1.05!28.26!POU2F2;;chr14:62162285..62162296,+!p3@HIF1A!1.04!52.55!HIF1A;;chr7:1577899..1577943,+!p3@MAFK!1.04!9.95!MAFK;;chr11:61520075..61520136,+!p1@C11orf9!1.03!20.70!C11orf9;;chr17:1959369..1959388,+!p2@HIC1!1.02!25.08!HIC1;;chr7:44143978..44143989,+!p2@AEBP1!1.02!17.52!AEBP1;;chr11:46299539..46299620,+!p2@CREB3L1!1.00!15.53!CREB3L1;;chr18:19749386..19749404,+!p2@GATA6!1.00!13.14!GATA6;;chr10:63809106..63809127,+!p1@ARID5B!0.99!121.42!ARID5B;;chr10:64576105..64576133,-!p1@EGR2!0.99!18.31!EGR2;;chr4:174450089..174450153,-!p2@HAND2!0.99!8.76!HAND2;;chr12:66218836..66218888,+!p1@HMGA2!0.98!81.61!HMGA2;;chr6:106534192..106534224,+!p1@PRDM1!0.98!24.68!PRDM1;;chr7:44143925..44143970,+!p1@AEBP1!0.97!192.28!AEBP1;;chr16:86544113..86544145,+!p1@FOXF1!0.97!10.35!FOXF1;;chr3:25469815..25469866,+!p3@RARB!0.97!8.36!RARB;;chr2:208030647..208030689,-!p1@KLF7!0.96!69.27!KLF7;;chr14:62162258..62162269,+!p2@HIF1A!0.95!78.03!HIF1A;;chr12:80085061..80085119,-!p6@PAWR!0.95!12.74!PAWR;;chr15:96869114..96869160,+!p11@NR2F2!0.94!10.75!NR2F2;;chr19:45971246..45971265,+!p1@FOSB!0.93!144.51!FOSB;;chr7:27224795..27224840,-!p2@HOXA11!0.93!7.56!HOXA11;;chr7:26191809..26191890,+!p1@NFE2L3!0.91!37.02!NFE2L3;;chr3:101546827..101546847,+!p2@NFKBIZ!0.91!10.35!NFKBIZ;;chr7:44143997..44144008,+!p3@AEBP1!0.91!9.16!AEBP1;;chr18:19749541..19749557,+!p1@GATA6!0.90!22.69!GATA6;;chr20:50179368..50179392,-!p2@NFATC2!0.90!9.16!NFATC2;;chr8:106330696..106330719,+!p2@ZFPM2!0.89!8.76!ZFPM2;;chr12:115121962..115121987,-!p1@TBX3!0.87!56.93!TBX3;;chr8:11561684..11561751,+!p1@GATA4!0.87!6.37!GATA4;;chr4:174451370..174451387,-!p1@HAND2!0.87!6.37!HAND2;;chr17:1958388..1958404,+!p1@HIC1!0.86!41.80!HIC1;;chr1:170632285..170632309,+!p1@PRRX1!0.86!7.17!PRRX1;;chr5:72744445..72744466,-!p2@FOXD1!0.85!10.35!FOXD1;;chr3:141121847..141121868,+!p5@ZBTB38!0.85!9.55!ZBTB38;;chr20:55204351..55204377,+!p1@TFAP2C!0.85!7.96!TFAP2C;;chr12:54402745..54402788,+!p1@HOXC8!0.84!5.97!HOXC8;;chr12:66218904..66218913,+!p11@HMGA2!0.84!5.97!HMGA2;;chr15:96869206..96869220,+!p21@NR2F2!0.84!5.97!NR2F2;;chr2:177001290..177001315,+!p1@HOXD3!0.84!5.97!HOXD3;;chr3:138665937..138665968,-!p1@FOXL2!0.84!5.97!FOXL2;;chr15:96874145..96874166,+!p7@NR2F2!0.83!11.54!NR2F2;;chr14:62203595..62203676,+!p4@HIF1A!0.83!11.15!HIF1A;;chr1:170632959..170632987,+!p4@PRRX1!0.83!6.37!PRRX1;;chr15:96876966..96877017,+!p12@NR2F2!0.82!8.36!NR2F2;;chr1:151032860..151032918,+!p1@MLLT11!0.81!70.46!MLLT11;;chr21:36260295..36260310,-!p3@RUNX1!0.81!9.16!RUNX1;;chr15:96874216..96874236,+!p13@NR2F2!0.81!8.76!NR2F2;;chr17:41622925..41622976,-!p3@ETV4!0.81!8.36!ETV4;;chr11:65687362..65687436,+!p3@DRAP1!0.80!26.27!DRAP1;;chr6:106534230..106534254,+!p2@PRDM1!0.79!13.93!PRDM1;;chr15:96874244..96874259,+!p5@NR2F2!0.79!13.14!NR2F2;;chr10:119303078..119303169,+!p2@EMX2!0.79!5.18!EMX2;;chr12:54393880..54393962,+!p1@HOXC9!0.79!5.18!HOXC9;;chr19:45908292..45908374,-!p1@PPP1R13L!0.78!48.57!PPP1R13L;;chr17:59477233..59477263,+!p1@TBX2!0.78!16.72!TBX2;;chr8:72756063..72756125,-!p1@MSC!0.78!10.75!MSC;;chr11:65686802..65686818,+!p6@DRAP1!0.78!9.16!DRAP1;;chr6:106546808..106546833,+!p3@PRDM1!0.77!6.37!PRDM1;;chr12:124873357..124873401,-!p1@NCOR2!0.76!61.31!NCOR2;;chr22:38598086..38598105,+!p1@MAFF!0.76!55.34!MAFF;;chr21:36259445..36259519,-!p4@RUNX1!0.76!14.33!RUNX1;;chr15:96869292..96869320,+!p15@NR2F2!0.76!7.17!NR2F2;;chr12:66218212..66218244,+!p5@HMGA2!0.76!7.17!HMGA2;;chr12:54447637..54447659,+!p4@HOXC4!0.76!4.78!HOXC4;;chr6:134210243..134210257,+!p1@TCF21!0.76!4.78!TCF21;;chr3:138665969..138665993,-!p2@FOXL2!0.76!4.78!FOXL2;;chr15:96869165..96869183,+!p20@NR2F2!0.76!4.78!NR2F2;;chr17:41739283..41739297,-!p1@MEOX1!0.76!4.78!MEOX1;;chr10:63809077..63809089,+!p5@ARID5B!0.75!10.75!ARID5B;;chr14:62213827..62213853,+!p6@HIF1A!0.75!6.77!HIF1A;;chr5:72743793..72743855,-!p4@FOXD1!0.75!5.57!FOXD1;;chr11:120107344..120107351,+!p1@POU2F3!0.74!5.57!POU2F3;;chr8:72756267..72756296,-!p4@MSC!0.73!6.77!MSC;;chr5:139492456..139492489,+!p7@PURA!0.73!4.38!PURA;;chr19:47523058..47523114,+!p1@NPAS1!0.73!4.38!NPAS1;;chr16:31076332..31076388,-!p3@ZNF668!0.73!4.38!ZNF668;;chr3:114343039..114343085,-!p8@ZBTB20!0.73!4.38!ZBTB20;;chr2:239756739..239756755,+!p2@TWIST2!0.71!7.56!TWIST2;;chr8:72756637..72756664,-!p3@MSC!0.71!4.78!MSC;;chr9:35732647..35732678,+!p2@CREB3!0.70!25.08!CREB3;;chr5:72744594..72744609,-!p1@FOXD1!0.70!20.70!FOXD1;;chr2:239756671..239756732,+!p1@TWIST2!0.70!14.33!TWIST2;;chr12:66218183..66218209,+!p4@HMGA2!0.70!8.36!HMGA2;;chr21:36260343..36260402,-!p6@RUNX1!0.70!6.77!RUNX1;;chr11:12696071..12696086,+!p3@TEAD1!0.70!5.57!TEAD1;;chr11:125034640..125034655,+!p1@PKNOX2!0.70!3.98!PKNOX2;;chr11:34642612..34642646,+!p1@EHF!0.70!3.98!EHF;;chr12:66218923..66218934,+!p14@HMGA2!0.70!3.98!HMGA2;;chr2:176969124..176969155,+!p5@HOXD11!0.70!3.98!HOXD11;;chr2:176994919..176994931,+!p2@HOXD8!0.70!3.98!HOXD8;;chr3:101575889..101575903,+!p3@NFKBIZ!0.70!3.98!NFKBIZ;;chr2:145275162..145275202,-!p2@ZEB2!0.69!26.27!ZEB2;;chr5:92918919..92918942,+!p1@NR2F1!0.69!19.51!NR2F1;;chr2:200322654..200322707,-!p2@SATB2!0.69!5.97!SATB2;;chr12:26277817..26277863,-!p2@BHLHE41!0.69!5.57!BHLHE41;;chr5:92918956..92918969,+!p4@NR2F1!0.69!4.38!NR2F1;;chr20:42543441..42543497,+!p1@TOX2!0.68!19.11!TOX2;;chr3:141105705..141105770,+!p4@ZBTB38!0.68!4.78!ZBTB38;;chr1:170633262..170633285,+!p3@PRRX1!0.68!4.38!PRRX1;;chr1:37940170..37940190,+!p1@ZC3H12A!0.66!51.75!ZC3H12A;;chr3:5021268..5021282,+!p4@BHLHE40!0.66!7.96!BHLHE40;;chr2:121493492..121493537,+!p2@GLI2!0.66!6.37!GLI2;;chr1:170633348..170633399,+!p2@PRRX1!0.66!5.18!PRRX1;;chr1:170632683..170632696,+!p12@PRRX1!0.66!3.58!PRRX1;;chr2:176994408..176994492,+!p1@HOXD8!0.66!3.58!HOXD8;;chr3:138665760..138665772,-!p3@FOXL2!0.66!3.58!FOXL2;;chr3:141121871..141121885,+!p13@ZBTB38!0.66!3.58!ZBTB38;;chr9:127269661..127269719,-!p1@NR5A1!0.66!3.58!NR5A1;;chr3:101568349..101568365,+!p1@NFKBIZ!0.65!212.98!NFKBIZ;;chr12:66218573..66218596,+!p7@HMGA2!0.65!5.57!HMGA2;;chr17:46126136..46126152,+!p1@NFE2L1!0.64!205.82!NFE2L1;;chr21:30671690..30671762,+!p2@BACH1!0.64!13.14!BACH1;;chr17:38498594..38498661,+!p2@RARA!0.64!12.74!RARA;;chr7:137686763..137686784,-!p5@CREB3L2!0.64!6.37!CREB3L2;;chr17:41622765..41622821,-!p2@ETV4!0.64!5.57!ETV4;;chr20:6748325..6748352,+!p1@BMP2!0.64!5.18!BMP2;;chr15:83953397..83953425,-!p1@BNC1!0.64!3.98!BNC1;;chr2:101591314..101591333,+!p2@NPAS2!0.64!3.98!NPAS2;;chr18:19749517..19749531,+!p3@GATA6!0.63!6.37!GATA6;;chr20:50721803..50721857,-!p2@ZFP64!0.63!5.57!ZFP64;;chr19:57792157..57792170,+!p6@ZNF460!0.63!5.18!ZNF460;;chr11:65687222..65687240,+!p7@DRAP1!0.63!4.38!DRAP1;;chr12:115122005..115122016,-!p3@TBX3!0.63!3.98!TBX3;;chr5:137804484..137804498,+!p2@EGR1!0.62!14.73!EGR1;;chr5:139487608..139487663,+!p3@PURA!0.62!7.56!PURA;;chrX:66763815..66763854,+!p2@AR!0.62!4.38!AR;;chr18:52989001..52989030,-!p10@TCF4!0.62!3.58!TCF4;;chr2:121493717..121493755,+!p3@GLI2!0.62!3.58!GLI2;;chr2:176969097..176969109,+!p3@HOXD11!0.62!3.18!HOXD11;;chr2:176973498..176973524,+!p1@HOXD10!0.62!3.18!HOXD10;;chr3:25470062..25470084,+!p4@RARB!0.62!3.18!RARB;;chr12:66358080..66358094,+!p15@HMGA2!0.62!3.18!HMGA2;;chr6:106546731..106546755,+!p5@PRDM1!0.62!3.18!PRDM1;;chr1:170633058..170633084,+!p5@PRRX1!0.62!3.18!PRRX1;;chr8:49833978..49833996,-!p1@SNAI2!0.61!76.43!SNAI2;;chr15:60884706..60884743,-!p1@RORA!0.61!18.71!RORA;;chr11:65686732..65686756,+!p2@DRAP1!0.61!15.13!DRAP1;;chr10:63809134..63809145,+!p6@ARID5B!0.61!7.96!ARID5B;;chr1:151032739..151032748,+!p6@MLLT11!0.61!3.98!MLLT11;;chr15:96874012..96874042,+!p2@NR2F2!0.60!32.25!NR2F2;;chr10:63809013..63809041,+!p3@ARID5B!0.60!19.90!ARID5B;;chr2:66662281..66662308,+!p1@MEIS1!0.60!11.94!MEIS1;;chr20:39946361..39946379,-!p2@ZHX3!0.60!10.35!ZHX3;;chr22:38598057..38598071,+!p3@MAFF!0.60!7.96!MAFF;;chr17:46127997..46128015,+!p5@NFE2L1!0.60!4.38!NFE2L1;;chr18:52989565..52989623,-!p9@TCF4!0.60!3.98!TCF4;;chr6:34204921..34204939,+!p3@HMGA1!0.59!107.88!HMGA1;;chr5:134369905..134369972,-!p1@PITX1!0.59!4.78!PITX1;;chr8:72756213..72756243,-!p5@MSC!0.59!3.98!MSC;;chr5:92919375..92919438,+!p6@NR2F1!0.59!3.18!NR2F1;;chr14:62162224..62162254,+!p1@HIF1A!0.58!507.97!HIF1A;;chr2:28616337..28616355,+!p2@FOSL2!0.58!61.70!FOSL2;;chr6:21597765..21597779,+!p2@SOX4!0.58!27.87!SOX4;;chr14:62203749..62203798,+!p5@HIF1A!0.58!4.78!HIF1A;;chr6:10415276..10415341,-!p2@TFAP2A!0.58!3.58!TFAP2A;;chr7:27192185..27192209,-!p1@HOXA3!0.58!2.79!HOXA3;;chr7:27205136..27205164,-!p1@HOXA9!0.58!2.79!HOXA9;;chr22:21771656..21771662,+!p1@HIC2!0.58!2.79!HIC2;;chr2:177053386..177053402,+!p1@HOXD1!0.58!2.79!HOXD1;;chr2:19558327..19558334,-!p2@OSR1!0.58!2.79!OSR1;;chr3:138665774..138665786,-!p5@FOXL2!0.58!2.79!FOXL2;;chr3:141087562..141087594,+!p12@ZBTB38!0.58!2.79!ZBTB38;;chr16:51185172..51185197,-!p1@SALL1!0.58!2.79!SALL1;;chr18:52988979..52988993,-!p18@TCF4!0.58!2.79!TCF4;;chr10:119302645..119302712,+!p3@EMX2!0.58!2.79!EMX2;;chr12:54394309..54394336,+!p2@HOXC9!0.58!2.79!HOXC9;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.58!2.79!HOXC5;;chr12:66218420..66218439,+!p12@HMGA2!0.58!2.79!HMGA2;;chr12:66218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| ||
|ffid_belonging_in_development=CL:0000134 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520right%2520ovary%252c%2520donor4.CNhs13096.11837-124H1.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520right%2520ovary%252c%2520donor4.CNhs13096.11837-124H1.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520right%2520ovary%252c%2520donor4.CNhs13096.11837-124H1.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520right%2520ovary%252c%2520donor4.CNhs13096.11837-124H1.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520right%2520ovary%252c%2520donor4.CNhs13096.11837-124H1.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11837-124H1 | |id=FF:11837-124H1 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000275 | ||
|is_obsolete= | |||
|library_id=CNhs13096 | |||
|library_id_phase_based=2:CNhs13096 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11837 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11837 | |||
|name=mesenchymal precursor cell - ovarian cancer right ovary, donor4 | |name=mesenchymal precursor cell - ovarian cancer right ovary, donor4 | ||
|namespace= | |namespace= | ||
| Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs13096,LSID1001,release013,COMPLETED | |profile_hcage=CNhs13096,LSID1001,release013,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=124 | |rna_box=124 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 78: | ||
|rna_weight_ug=20.82045 | |rna_weight_ug=20.82045 | ||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 91: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.97218730887804e-214!GO:0005737;cytoplasm;1.62219236739823e-184!GO:0043226;organelle;2.61918806175296e-150!GO:0043229;intracellular organelle;7.18714074176824e-150!GO:0043231;intracellular membrane-bound organelle;7.35649500426701e-144!GO:0043227;membrane-bound organelle;1.26479382457914e-143!GO:0044444;cytoplasmic part;4.7331998511389e-132!GO:0044422;organelle part;9.57691602468801e-117!GO:0044446;intracellular organelle part;2.30574231988348e-115!GO:0005515;protein binding;1.32922103213977e-86!GO:0032991;macromolecular complex;6.48635489013952e-77!GO:0044238;primary metabolic process;3.76958398559214e-70!GO:0044237;cellular metabolic process;2.14225172104825e-68!GO:0030529;ribonucleoprotein complex;1.50532744588339e-64!GO:0043170;macromolecule metabolic process;2.3651707559531e-64!GO:0043233;organelle lumen;1.49851400119398e-54!GO:0031974;membrane-enclosed lumen;1.49851400119398e-54!GO:0031090;organelle membrane;5.33943126782755e-52!GO:0019538;protein metabolic process;9.64527596910607e-52!GO:0003723;RNA binding;8.36425762273849e-51!GO:0044428;nuclear part;9.90664551662969e-51!GO:0005739;mitochondrion;4.79233100775223e-49!GO:0044260;cellular macromolecule metabolic process;5.79485377536382e-47!GO:0016043;cellular component organization and biogenesis;1.16882199803474e-46!GO:0044267;cellular protein metabolic process;5.94384414021531e-46!GO:0033036;macromolecule localization;3.17367684713707e-43!GO:0015031;protein transport;5.30901758927658e-43!GO:0005634;nucleus;5.30901758927658e-43!GO:0006412;translation;3.23839403465667e-42!GO:0005840;ribosome;1.17832648536764e-40!GO:0045184;establishment of protein localization;2.16421935796212e-40!GO:0008104;protein localization;2.16421935796212e-40!GO:0043234;protein complex;6.66778640553029e-40!GO:0005829;cytosol;5.83029137280568e-39!GO:0003735;structural constituent of ribosome;9.5290257696678e-37!GO:0009058;biosynthetic process;5.23860906574698e-36!GO:0046907;intracellular transport;8.15984846780984e-35!GO:0044429;mitochondrial part;1.72071639352004e-34!GO:0009059;macromolecule biosynthetic process;1.72071639352004e-34!GO:0031967;organelle envelope;1.4301818090134e-33!GO:0006396;RNA processing;1.51145447465389e-33!GO:0031975;envelope;3.23178258621246e-33!GO:0033279;ribosomal subunit;4.1461642466259e-33!GO:0044249;cellular biosynthetic process;4.80187825852213e-33!GO:0031981;nuclear lumen;1.46406238621696e-31!GO:0043283;biopolymer metabolic process;3.13461735754362e-31!GO:0006886;intracellular protein transport;1.12170525113083e-28!GO:0016071;mRNA metabolic process;3.29269616084342e-28!GO:0008380;RNA splicing;6.47165541026782e-27!GO:0010467;gene expression;1.11418980371169e-26!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.99376958168164e-26!GO:0006996;organelle organization and biogenesis;4.67818419171216e-26!GO:0005783;endoplasmic reticulum;5.19330707224154e-25!GO:0005740;mitochondrial envelope;2.89175296249797e-24!GO:0012505;endomembrane system;3.14291641583994e-24!GO:0006397;mRNA processing;3.62255345226866e-24!GO:0065003;macromolecular complex assembly;1.08258676614356e-23!GO:0043228;non-membrane-bound organelle;1.31967191194254e-23!GO:0043232;intracellular non-membrane-bound organelle;1.31967191194254e-23!GO:0031966;mitochondrial membrane;6.12431003875281e-23!GO:0051641;cellular localization;3.91668420996189e-22!GO:0051649;establishment of cellular localization;3.91668420996189e-22!GO:0022613;ribonucleoprotein complex biogenesis and assembly;5.1935754226819e-22!GO:0044445;cytosolic part;5.66304233146974e-22!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.36536128235205e-21!GO:0022607;cellular component assembly;2.54465554880172e-21!GO:0019866;organelle inner membrane;3.19657987195092e-21!GO:0006119;oxidative phosphorylation;2.19175575170708e-20!GO:0005743;mitochondrial inner membrane;4.5570641149016e-20!GO:0044432;endoplasmic reticulum part;1.88995337031533e-19!GO:0000166;nucleotide binding;2.35773914057154e-19!GO:0005654;nucleoplasm;3.14272294718641e-19!GO:0005794;Golgi apparatus;4.49607657891671e-19!GO:0016462;pyrophosphatase activity;5.12067870488367e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;5.94371770936237e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;7.64805411533005e-19!GO:0017111;nucleoside-triphosphatase activity;1.15201576962081e-18!GO:0006457;protein folding;1.15201576962081e-18!GO:0048770;pigment granule;1.39141423180716e-18!GO:0042470;melanosome;1.39141423180716e-18!GO:0005681;spliceosome;1.4261535342454e-18!GO:0015934;large ribosomal subunit;1.07385082459282e-17!GO:0043285;biopolymer catabolic process;1.35876853057508e-17!GO:0044455;mitochondrial membrane part;1.70492210150817e-17!GO:0008134;transcription factor binding;6.02823855882152e-17!GO:0015935;small ribosomal subunit;2.54193082372071e-16!GO:0009057;macromolecule catabolic process;3.45300606727433e-16!GO:0030163;protein catabolic process;5.64722475719169e-16!GO:0044265;cellular macromolecule catabolic process;9.26845703051986e-16!GO:0048193;Golgi vesicle transport;1.18409903759374e-15!GO:0044451;nucleoplasm part;1.388273955286e-15!GO:0016874;ligase activity;1.89612439644715e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;2.23815504421999e-15!GO:0000502;proteasome complex (sensu Eukaryota);3.46739194682527e-15!GO:0019941;modification-dependent protein catabolic process;4.29476152014445e-15!GO:0043632;modification-dependent macromolecule catabolic process;4.29476152014445e-15!GO:0044257;cellular protein catabolic process;4.30118225383039e-15!GO:0006512;ubiquitin cycle;4.73809719510811e-15!GO:0006511;ubiquitin-dependent protein catabolic process;7.67524465293765e-15!GO:0022618;protein-RNA complex assembly;1.04950134555919e-14!GO:0005746;mitochondrial respiratory chain;1.06244625126865e-14!GO:0006605;protein targeting;1.85280616062796e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.87232816230321e-14!GO:0032553;ribonucleotide binding;2.32764668609299e-14!GO:0032555;purine ribonucleotide binding;2.32764668609299e-14!GO:0016192;vesicle-mediated transport;3.32676227137104e-14!GO:0017076;purine nucleotide binding;4.70921507180493e-14!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.02366002530101e-13!GO:0050136;NADH dehydrogenase (quinone) activity;1.16804190905026e-13!GO:0003954;NADH dehydrogenase activity;1.16804190905026e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.16804190905026e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.24624662983746e-13!GO:0048523;negative regulation of cellular process;1.65407167871089e-13!GO:0043412;biopolymer modification;2.47338095316761e-13!GO:0008135;translation factor activity, nucleic acid binding;3.54470086946593e-13!GO:0005789;endoplasmic reticulum membrane;3.81678144954344e-13!GO:0051082;unfolded protein binding;4.03498582122229e-13!GO:0006259;DNA metabolic process;4.3132646332389e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);5.48072616980354e-13!GO:0051186;cofactor metabolic process;5.56421355104093e-13!GO:0012501;programmed cell death;7.71750275638231e-13!GO:0031980;mitochondrial lumen;1.04792972941516e-12!GO:0005759;mitochondrial matrix;1.04792972941516e-12!GO:0044248;cellular catabolic process;1.13193368967311e-12!GO:0005730;nucleolus;1.45274984702761e-12!GO:0005793;ER-Golgi intermediate compartment;1.74113781483474e-12!GO:0006915;apoptosis;1.93532798737463e-12!GO:0006464;protein modification process;1.97750201026643e-12!GO:0048519;negative regulation of biological process;7.89330766811977e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;8.42474317778211e-12!GO:0007049;cell cycle;8.84485182368031e-12!GO:0003712;transcription cofactor activity;9.26920017781528e-12!GO:0030964;NADH dehydrogenase complex (quinone);9.39530741307011e-12!GO:0045271;respiratory chain complex I;9.39530741307011e-12!GO:0005747;mitochondrial respiratory chain complex I;9.39530741307011e-12!GO:0042775;organelle ATP synthesis coupled electron transport;1.50505385494694e-11!GO:0042773;ATP synthesis coupled electron transport;1.50505385494694e-11!GO:0008219;cell death;1.97875950485904e-11!GO:0016265;death;1.97875950485904e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.82704173059295e-11!GO:0005524;ATP binding;3.10486755543152e-11!GO:0032559;adenyl ribonucleotide binding;5.60170017971471e-11!GO:0003743;translation initiation factor activity;8.02312118719654e-11!GO:0006732;coenzyme metabolic process;8.97442995935431e-11!GO:0030554;adenyl nucleotide binding;1.39745040471684e-10!GO:0009055;electron carrier activity;1.7524394900762e-10!GO:0043687;post-translational protein modification;2.39101599845723e-10!GO:0005761;mitochondrial ribosome;3.74760489756986e-10!GO:0000313;organellar ribosome;3.74760489756986e-10!GO:0008639;small protein conjugating enzyme activity;5.06712431861338e-10!GO:0006913;nucleocytoplasmic transport;5.37324103421898e-10!GO:0005635;nuclear envelope;5.46992407605699e-10!GO:0009259;ribonucleotide metabolic process;5.49854005498449e-10!GO:0006413;translational initiation;5.8826804419273e-10!GO:0004842;ubiquitin-protein ligase activity;9.10363626174213e-10!GO:0051169;nuclear transport;9.97928089673897e-10!GO:0003676;nucleic acid binding;1.02780401586574e-09!GO:0031965;nuclear membrane;1.21436533263937e-09!GO:0016604;nuclear body;1.42748935055668e-09!GO:0019787;small conjugating protein ligase activity;1.43853189045542e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;1.51357619645965e-09!GO:0000375;RNA splicing, via transesterification reactions;1.51357619645965e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.51357619645965e-09!GO:0009150;purine ribonucleotide metabolic process;1.67592752029849e-09!GO:0006163;purine nucleotide metabolic process;1.71043834000919e-09!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.96595521761552e-09!GO:0005768;endosome;2.33158576957435e-09!GO:0006446;regulation of translational initiation;2.52499254894186e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.63960937818615e-09!GO:0003924;GTPase activity;2.64622672775545e-09!GO:0008565;protein transporter activity;3.06880392824084e-09!GO:0009152;purine ribonucleotide biosynthetic process;3.87354581923315e-09!GO:0016070;RNA metabolic process;3.9313191941045e-09!GO:0005788;endoplasmic reticulum lumen;4.04437530856116e-09!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;4.17763115104876e-09!GO:0006164;purine nucleotide biosynthetic process;4.22835615655887e-09!GO:0009260;ribonucleotide biosynthetic process;4.344106277794e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.36617462622359e-09!GO:0043067;regulation of programmed cell death;4.44356091286351e-09!GO:0050794;regulation of cellular process;4.55642210167645e-09!GO:0016881;acid-amino acid ligase activity;6.94428281638463e-09!GO:0043069;negative regulation of programmed cell death;7.32107135701284e-09!GO:0042981;regulation of apoptosis;7.68459007127667e-09!GO:0044431;Golgi apparatus part;1.04442626794939e-08!GO:0009199;ribonucleoside triphosphate metabolic process;1.18614617588124e-08!GO:0022402;cell cycle process;1.43659137658871e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.45395835558501e-08!GO:0016887;ATPase activity;1.47381542118998e-08!GO:0006888;ER to Golgi vesicle-mediated transport;1.71422882467405e-08!GO:0003714;transcription corepressor activity;1.78936658149809e-08!GO:0009056;catabolic process;1.99765993333955e-08!GO:0043066;negative regulation of apoptosis;2.18351326735278e-08!GO:0006916;anti-apoptosis;2.21470531757234e-08!GO:0009141;nucleoside triphosphate metabolic process;2.2754289479998e-08!GO:0031988;membrane-bound vesicle;2.77413218975275e-08!GO:0051246;regulation of protein metabolic process;2.77439719542273e-08!GO:0016023;cytoplasmic membrane-bound vesicle;2.88654289347237e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.92845392254884e-08!GO:0009144;purine nucleoside triphosphate metabolic process;2.92845392254884e-08!GO:0017038;protein import;2.98504867392165e-08!GO:0042623;ATPase activity, coupled;3.1258417157894e-08!GO:0042254;ribosome biogenesis and assembly;3.13245202260911e-08!GO:0044453;nuclear membrane part;3.14102657571451e-08!GO:0009142;nucleoside triphosphate biosynthetic process;3.37704931753641e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.37704931753641e-08!GO:0015986;ATP synthesis coupled proton transport;3.43808251643615e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.43808251643615e-08!GO:0030120;vesicle coat;4.11377303131115e-08!GO:0030662;coated vesicle membrane;4.11377303131115e-08!GO:0019829;cation-transporting ATPase activity;4.14366143777067e-08!GO:0007249;I-kappaB kinase/NF-kappaB cascade;4.46761455941293e-08!GO:0016607;nuclear speck;4.51589644910308e-08!GO:0006366;transcription from RNA polymerase II promoter;4.7512059680738e-08!GO:0051726;regulation of cell cycle;5.60766661930648e-08!GO:0000074;regulation of progression through cell cycle;5.61287309861169e-08!GO:0031252;leading edge;7.91397887284728e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;8.59969037842869e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;8.59969037842869e-08!GO:0016564;transcription repressor activity;9.49054498833632e-08!GO:0004386;helicase activity;9.68235639911337e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.98475317508886e-07!GO:0009060;aerobic respiration;2.14491881028916e-07!GO:0006461;protein complex assembly;2.16198089582841e-07!GO:0046034;ATP metabolic process;2.31177055504774e-07!GO:0031982;vesicle;3.67755041189596e-07!GO:0008026;ATP-dependent helicase activity;4.4812452806131e-07!GO:0015078;hydrogen ion transmembrane transporter activity;5.01404488813246e-07!GO:0031410;cytoplasmic vesicle;5.19211852862332e-07!GO:0005773;vacuole;5.65691189015135e-07!GO:0006754;ATP biosynthetic process;5.94908647344117e-07!GO:0006753;nucleoside phosphate metabolic process;5.94908647344117e-07!GO:0016787;hydrolase activity;6.72703570396744e-07!GO:0000139;Golgi membrane;7.20664790541579e-07!GO:0006399;tRNA metabolic process;7.61021322211554e-07!GO:0050789;regulation of biological process;8.2739923485096e-07!GO:0048475;coated membrane;8.49428459579114e-07!GO:0030117;membrane coat;8.49428459579114e-07!GO:0048522;positive regulation of cellular process;8.64034649768867e-07!GO:0051188;cofactor biosynthetic process;8.82763642906306e-07!GO:0016469;proton-transporting two-sector ATPase complex;9.1663392048407e-07!GO:0008092;cytoskeletal protein binding;9.18060554373808e-07!GO:0030036;actin cytoskeleton organization and biogenesis;9.28800746071595e-07!GO:0005839;proteasome core complex (sensu Eukaryota);9.28800746071595e-07!GO:0045333;cellular respiration;1.29469089668097e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.2968673184977e-06!GO:0004812;aminoacyl-tRNA ligase activity;1.2968673184977e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.2968673184977e-06!GO:0006974;response to DNA damage stimulus;1.36922164898497e-06!GO:0043038;amino acid activation;1.36922164898497e-06!GO:0006418;tRNA aminoacylation for protein translation;1.36922164898497e-06!GO:0043039;tRNA aminoacylation;1.36922164898497e-06!GO:0031324;negative regulation of cellular metabolic process;1.89463849003944e-06!GO:0005643;nuclear pore;1.98155168712399e-06!GO:0009117;nucleotide metabolic process;1.99073551215999e-06!GO:0006325;establishment and/or maintenance of chromatin architecture;2.18742788799212e-06!GO:0007243;protein kinase cascade;2.21486526476903e-06!GO:0032446;protein modification by small protein conjugation;2.63082660398302e-06!GO:0006099;tricarboxylic acid cycle;2.66810097374756e-06!GO:0046356;acetyl-CoA catabolic process;2.66810097374756e-06!GO:0051170;nuclear import;2.82805713614452e-06!GO:0007005;mitochondrion organization and biogenesis;3.18335312621095e-06!GO:0006793;phosphorus metabolic process;3.32304122031779e-06!GO:0006796;phosphate metabolic process;3.32304122031779e-06!GO:0065002;intracellular protein transport across a membrane;3.84853793058267e-06!GO:0016567;protein ubiquitination;4.09582867406232e-06!GO:0044440;endosomal part;4.18943639596662e-06!GO:0010008;endosome membrane;4.18943639596662e-06!GO:0006606;protein import into nucleus;4.34479978537825e-06!GO:0006323;DNA packaging;5.60279348550394e-06!GO:0008361;regulation of cell size;5.952900516212e-06!GO:0030029;actin filament-based process;6.66484979438394e-06!GO:0005798;Golgi-associated vesicle;6.66484979438394e-06!GO:0016310;phosphorylation;6.66484979438394e-06!GO:0051187;cofactor catabolic process;6.6784139864311e-06!GO:0007010;cytoskeleton organization and biogenesis;7.41195682847658e-06!GO:0004298;threonine endopeptidase activity;7.87390070944491e-06!GO:0006084;acetyl-CoA metabolic process;7.9676929344898e-06!GO:0009109;coenzyme catabolic process;8.00991042443594e-06!GO:0005525;GTP binding;8.25639292581729e-06!GO:0000323;lytic vacuole;8.34514267932689e-06!GO:0005764;lysosome;8.34514267932689e-06!GO:0000278;mitotic cell cycle;9.19086160862304e-06!GO:0045786;negative regulation of progression through cell cycle;9.3566721189232e-06!GO:0016491;oxidoreductase activity;9.56886023610579e-06!GO:0016049;cell growth;1.08138650829656e-05!GO:0009108;coenzyme biosynthetic process;1.18235403519002e-05!GO:0030532;small nuclear ribonucleoprotein complex;1.23115411749053e-05!GO:0009892;negative regulation of metabolic process;1.35421202598831e-05!GO:0051276;chromosome organization and biogenesis;1.36704823989397e-05!GO:0006752;group transfer coenzyme metabolic process;1.53028914181568e-05!GO:0051789;response to protein stimulus;1.75820554447574e-05!GO:0006986;response to unfolded protein;1.75820554447574e-05!GO:0019899;enzyme binding;1.77788852598651e-05!GO:0005770;late endosome;1.96785284342996e-05!GO:0045259;proton-transporting ATP synthase complex;1.99412213027419e-05!GO:0046930;pore complex;2.07018052211041e-05!GO:0015630;microtubule cytoskeleton;2.2957077088291e-05!GO:0030133;transport vesicle;2.3370874893249e-05!GO:0006613;cotranslational protein targeting to membrane;2.38723783591968e-05!GO:0006403;RNA localization;2.57297198964716e-05!GO:0045454;cell redox homeostasis;2.59485510554441e-05!GO:0016563;transcription activator activity;2.71684401757357e-05!GO:0005769;early endosome;2.74113100053731e-05!GO:0006281;DNA repair;3.26031107642983e-05!GO:0009719;response to endogenous stimulus;3.30357173166796e-05!GO:0030867;rough endoplasmic reticulum membrane;3.75892731177649e-05!GO:0050657;nucleic acid transport;3.95460849633306e-05!GO:0051236;establishment of RNA localization;3.95460849633306e-05!GO:0050658;RNA transport;3.95460849633306e-05!GO:0001558;regulation of cell growth;4.00663985732624e-05!GO:0003713;transcription coactivator activity;4.43858480349625e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;4.63237446853161e-05!GO:0005667;transcription factor complex;5.32770705867658e-05!GO:0006364;rRNA processing;5.75187556206176e-05!GO:0003724;RNA helicase activity;5.88537180464381e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;6.54284992803265e-05!GO:0032561;guanyl ribonucleotide binding;6.97270802343627e-05!GO:0019001;guanyl nucleotide binding;6.97270802343627e-05!GO:0008654;phospholipid biosynthetic process;8.04915307833893e-05!GO:0005905;coated pit;8.06659257449641e-05!GO:0000151;ubiquitin ligase complex;8.19822004662224e-05!GO:0065004;protein-DNA complex assembly;8.48462279450081e-05!GO:0048518;positive regulation of biological process;8.52827518279193e-05!GO:0016853;isomerase activity;9.03412828143077e-05!GO:0005048;signal sequence binding;9.08267376535668e-05!GO:0016859;cis-trans isomerase activity;9.89730305278241e-05!GO:0016740;transferase activity;0.000100839461992358!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000101302409463155!GO:0016072;rRNA metabolic process;0.00010620344209723!GO:0033116;ER-Golgi intermediate compartment membrane;0.000109744922443284!GO:0043566;structure-specific DNA binding;0.000116073935892485!GO:0031968;organelle outer membrane;0.000116073935892485!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000116434917381881!GO:0000245;spliceosome assembly;0.000130081217969587!GO:0019867;outer membrane;0.000132150972558665!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000158377472474622!GO:0016481;negative regulation of transcription;0.000160834002252602!GO:0008047;enzyme activator activity;0.00016152313584895!GO:0003779;actin binding;0.000167901958081755!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.000170008547730261!GO:0006091;generation of precursor metabolites and energy;0.000170008547730261!GO:0015980;energy derivation by oxidation of organic compounds;0.000172644941410207!GO:0001726;ruffle;0.000184410432023701!GO:0044262;cellular carbohydrate metabolic process;0.000193628630442363!GO:0006333;chromatin assembly or disassembly;0.000195242582711964!GO:0043623;cellular protein complex assembly;0.0002318370798251!GO:0016044;membrane organization and biogenesis;0.000251180221606452!GO:0016568;chromatin modification;0.000251180221606452!GO:0005762;mitochondrial large ribosomal subunit;0.000259397966613406!GO:0000315;organellar large ribosomal subunit;0.000259397966613406!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000267778077899484!GO:0003697;single-stranded DNA binding;0.000271909536193953!GO:0065007;biological regulation;0.000283309898382722!GO:0005791;rough endoplasmic reticulum;0.000315187714652386!GO:0005885;Arp2/3 protein complex;0.000319449693473277!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000319627918005023!GO:0008250;oligosaccharyl transferase complex;0.00034871585994443!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000356115507721339!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000409607950076718!GO:0006612;protein targeting to membrane;0.000410611136600382!GO:0007264;small GTPase mediated signal transduction;0.000435137462418585!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000443664810664924!GO:0000785;chromatin;0.000461979093385181!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000461979093385181!GO:0015399;primary active transmembrane transporter activity;0.000461979093385181!GO:0004576;oligosaccharyl transferase activity;0.00047603326597344!GO:0005813;centrosome;0.000489320340748805!GO:0005741;mitochondrial outer membrane;0.000522267632032866!GO:0005694;chromosome;0.000529692665337191!GO:0009967;positive regulation of signal transduction;0.000529692665337191!GO:0048468;cell development;0.000533681766866724!GO:0065009;regulation of a molecular function;0.00063387936072465!GO:0006891;intra-Golgi vesicle-mediated transport;0.000636997271753375!GO:0051028;mRNA transport;0.000667184855464119!GO:0006260;DNA replication;0.000683518143388503!GO:0051427;hormone receptor binding;0.000733504413380549!GO:0030663;COPI coated vesicle membrane;0.000788458489334061!GO:0030126;COPI vesicle coat;0.000788458489334061!GO:0030659;cytoplasmic vesicle membrane;0.000799901043087939!GO:0018196;peptidyl-asparagine modification;0.000827819645521529!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000827819645521529!GO:0043021;ribonucleoprotein binding;0.000836654868556215!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000856695792395895!GO:0051920;peroxiredoxin activity;0.00101080976165239!GO:0005815;microtubule organizing center;0.00106120887277372!GO:0008186;RNA-dependent ATPase activity;0.00110898464878817!GO:0044427;chromosomal part;0.00115156375458392!GO:0009165;nucleotide biosynthetic process;0.001201706552837!GO:0006414;translational elongation;0.0012782523495734!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00129343917369304!GO:0035257;nuclear hormone receptor binding;0.00133876678791081!GO:0030137;COPI-coated vesicle;0.00133876678791081!GO:0051301;cell division;0.00147520614018127!GO:0031543;peptidyl-proline dioxygenase activity;0.00151752376625034!GO:0044433;cytoplasmic vesicle part;0.00157254363805532!GO:0006334;nucleosome assembly;0.00175817632546979!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00184655722435425!GO:0016779;nucleotidyltransferase activity;0.00184657198705747!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00186552722239365!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00206871612373425!GO:0000087;M phase of mitotic cell cycle;0.00210148391120733!GO:0016197;endosome transport;0.00210149406855054!GO:0042802;identical protein binding;0.00211050153335556!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00218392693125556!GO:0030127;COPII vesicle coat;0.00225513966292269!GO:0012507;ER to Golgi transport vesicle membrane;0.00225513966292269!GO:0030658;transport vesicle membrane;0.00227910771036351!GO:0007067;mitosis;0.00230396550816247!GO:0048471;perinuclear region of cytoplasm;0.00232151507713192!GO:0030027;lamellipodium;0.00235814771386616!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00250721682488328!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00250721682488328!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00250721682488328!GO:0016363;nuclear matrix;0.00263255770653116!GO:0019798;procollagen-proline dioxygenase activity;0.00271121317759494!GO:0030134;ER to Golgi transport vesicle;0.00274096300672661!GO:0005096;GTPase activator activity;0.00276731109199522!GO:0030132;clathrin coat of coated pit;0.0027700961834074!GO:0043284;biopolymer biosynthetic process;0.00284664027087194!GO:0004004;ATP-dependent RNA helicase activity;0.00287078181860331!GO:0040008;regulation of growth;0.00292477057110711!GO:0019843;rRNA binding;0.00292531821904219!GO:0007050;cell cycle arrest;0.00294724179847693!GO:0051168;nuclear export;0.00298709141705557!GO:0012506;vesicle membrane;0.00304241286467778!GO:0046474;glycerophospholipid biosynthetic process;0.00334036399346361!GO:0006818;hydrogen transport;0.00334370523229893!GO:0008243;plasminogen activator activity;0.00336104542207564!GO:0006509;membrane protein ectodomain proteolysis;0.00362139887551717!GO:0033619;membrane protein proteolysis;0.00362139887551717!GO:0004177;aminopeptidase activity;0.00362973109269654!GO:0022403;cell cycle phase;0.00400642394145579!GO:0000314;organellar small ribosomal subunit;0.00419692943952291!GO:0005763;mitochondrial small ribosomal subunit;0.00419692943952291!GO:0008610;lipid biosynthetic process;0.00419692943952291!GO:0000059;protein import into nucleus, docking;0.00426013477122016!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00427529408090142!GO:0006979;response to oxidative stress;0.0042806314667291!GO:0006892;post-Golgi vesicle-mediated transport;0.0042806314667291!GO:0003690;double-stranded DNA binding;0.00428962503061749!GO:0045792;negative regulation of cell size;0.00441740571427046!GO:0016126;sterol biosynthetic process;0.00449580947105207!GO:0015992;proton transport;0.00453057696731576!GO:0030176;integral to endoplasmic reticulum membrane;0.00456456060069267!GO:0043492;ATPase activity, coupled to movement of substances;0.00461932234418148!GO:0048500;signal recognition particle;0.00462233415507466!GO:0031497;chromatin assembly;0.00468054864825897!GO:0006839;mitochondrial transport;0.00469370790022911!GO:0035258;steroid hormone receptor binding;0.00474806490318448!GO:0031418;L-ascorbic acid binding;0.00478450333067172!GO:0048487;beta-tubulin binding;0.00486978101382703!GO:0007040;lysosome organization and biogenesis;0.00523761743479981!GO:0017166;vinculin binding;0.00531634262909801!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.00531803915188216!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.00531803915188216!GO:0003729;mRNA binding;0.0053701142922338!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0053701142922338!GO:0030308;negative regulation of cell growth;0.00542431978367535!GO:0045892;negative regulation of transcription, DNA-dependent;0.00546703157180604!GO:0008139;nuclear localization sequence binding;0.00553657194506141!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00595832366967904!GO:0007033;vacuole organization and biogenesis;0.00618209003036116!GO:0031901;early endosome membrane;0.00618209003036116!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00618209003036116!GO:0046489;phosphoinositide biosynthetic process;0.00645555300402304!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00647587942568164!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0066817851422797!GO:0030660;Golgi-associated vesicle membrane;0.00675156016468182!GO:0045045;secretory pathway;0.00719842800853816!GO:0043681;protein import into mitochondrion;0.00719842800853816!GO:0007006;mitochondrial membrane organization and biogenesis;0.00721940252534741!GO:0022890;inorganic cation transmembrane transporter activity;0.00722683604009749!GO:0045941;positive regulation of transcription;0.00750351939265097!GO:0015631;tubulin binding;0.00753644166290679!GO:0006626;protein targeting to mitochondrion;0.00764789150409609!GO:0008632;apoptotic program;0.00779499761397255!GO:0001666;response to hypoxia;0.0081552877352027!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00839939873018783!GO:0045047;protein targeting to ER;0.00839939873018783!GO:0051252;regulation of RNA metabolic process;0.00847905911622922!GO:0030521;androgen receptor signaling pathway;0.00871015634562305!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0087188758147054!GO:0045893;positive regulation of transcription, DNA-dependent;0.00901883146474036!GO:0007242;intracellular signaling cascade;0.00939554028470029!GO:0046519;sphingoid metabolic process;0.00972266796188549!GO:0003899;DNA-directed RNA polymerase activity;0.00987504609019684!GO:0031072;heat shock protein binding;0.0100054540180615!GO:0051329;interphase of mitotic cell cycle;0.0106463202670002!GO:0030118;clathrin coat;0.0107549933212494!GO:0006402;mRNA catabolic process;0.0111159233594964!GO:0007030;Golgi organization and biogenesis;0.0112747438196649!GO:0006417;regulation of translation;0.0112747438196649!GO:0050790;regulation of catalytic activity;0.0114514936274086!GO:0046467;membrane lipid biosynthetic process;0.0115217852465011!GO:0005874;microtubule;0.0116378291103661!GO:0008312;7S RNA binding;0.0120137927460696!GO:0005862;muscle thin filament tropomyosin;0.01202879897097!GO:0008234;cysteine-type peptidase activity;0.0120756973077618!GO:0006383;transcription from RNA polymerase III promoter;0.0122214519755862!GO:0005869;dynactin complex;0.0128784012056213!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0130985049585678!GO:0006950;response to stress;0.0132799059311932!GO:0050811;GABA receptor binding;0.0136692692280969!GO:0004674;protein serine/threonine kinase activity;0.0138341163537396!GO:0007265;Ras protein signal transduction;0.0141869174122714!GO:0006607;NLS-bearing substrate import into nucleus;0.0145429973282586!GO:0050681;androgen receptor binding;0.0147767455224589!GO:0006650;glycerophospholipid metabolic process;0.0150689516414752!GO:0031529;ruffle organization and biogenesis;0.0151241962437217!GO:0051325;interphase;0.0153191255774111!GO:0051087;chaperone binding;0.0157531415938276!GO:0019222;regulation of metabolic process;0.0163133568877991!GO:0006672;ceramide metabolic process;0.0165579756197329!GO:0000209;protein polyubiquitination;0.0165917580981218!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0173998865589516!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0173998865589516!GO:0006740;NADPH regeneration;0.0185006424017753!GO:0006098;pentose-phosphate shunt;0.0185006424017753!GO:0051128;regulation of cellular component organization and biogenesis;0.018734166874857!GO:0006897;endocytosis;0.018734166874857!GO:0010324;membrane invagination;0.018734166874857!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0188523839994124!GO:0043022;ribosome binding;0.0193229322035032!GO:0009966;regulation of signal transduction;0.0200871218821819!GO:0006007;glucose catabolic process;0.0200871218821819!GO:0032940;secretion by cell;0.0203774112715405!GO:0008180;signalosome;0.0205348202979761!GO:0030032;lamellipodium biogenesis;0.0205753626643501!GO:0031902;late endosome membrane;0.0210068094919249!GO:0051270;regulation of cell motility;0.0210204516887!GO:0006595;polyamine metabolic process;0.0211888163146288!GO:0016272;prefoldin complex;0.0213018343961966!GO:0005581;collagen;0.0216710435769709!GO:0008022;protein C-terminus binding;0.0216903675790582!GO:0030041;actin filament polymerization;0.0220670976925462!GO:0003746;translation elongation factor activity;0.0222291590332265!GO:0003711;transcription elongation regulator activity;0.022568135364567!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0234015882273603!GO:0006354;RNA elongation;0.0235331899085854!GO:0030503;regulation of cell redox homeostasis;0.0238780791905326!GO:0043488;regulation of mRNA stability;0.0239816189882784!GO:0043487;regulation of RNA stability;0.0239816189882784!GO:0005100;Rho GTPase activator activity;0.0242446009101916!GO:0006518;peptide metabolic process;0.024354788794951!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.02471041555118!GO:0030518;steroid hormone receptor signaling pathway;0.0248307507288213!GO:0048144;fibroblast proliferation;0.024913604968626!GO:0048145;regulation of fibroblast proliferation;0.024913604968626!GO:0030125;clathrin vesicle coat;0.0249153955647735!GO:0030665;clathrin coated vesicle membrane;0.0249153955647735!GO:0005684;U2-dependent spliceosome;0.0249153955647735!GO:0005832;chaperonin-containing T-complex;0.0250507989809668!GO:0005938;cell cortex;0.0254750019685309!GO:0051272;positive regulation of cell motility;0.0255165711710132!GO:0040017;positive regulation of locomotion;0.0255165711710132!GO:0031625;ubiquitin protein ligase binding;0.0258394202582298!GO:0051336;regulation of hydrolase activity;0.0258394202582298!GO:0006695;cholesterol biosynthetic process;0.0258682650246079!GO:0008154;actin polymerization and/or depolymerization;0.02608747173999!GO:0030149;sphingolipid catabolic process;0.026551003918102!GO:0022408;negative regulation of cell-cell adhesion;0.0266358841729304!GO:0003678;DNA helicase activity;0.0266833262384923!GO:0035035;histone acetyltransferase binding;0.0267135786709147!GO:0043433;negative regulation of transcription factor activity;0.0267142090506908!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0267142090506908!GO:0030384;phosphoinositide metabolic process;0.0267142090506908!GO:0009889;regulation of biosynthetic process;0.0275204123506671!GO:0022406;membrane docking;0.0275943539621069!GO:0048278;vesicle docking;0.0275943539621069!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0282426187967742!GO:0016301;kinase activity;0.0282426187967742!GO:0005774;vacuolar membrane;0.0282426187967742!GO:0005819;spindle;0.0283062881120599!GO:0031326;regulation of cellular biosynthetic process;0.0284503124068182!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0289523416050582!GO:0015002;heme-copper terminal oxidase activity;0.0289523416050582!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0289523416050582!GO:0004129;cytochrome-c oxidase activity;0.0289523416050582!GO:0003756;protein disulfide isomerase activity;0.0291722473347546!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0291722473347546!GO:0030145;manganese ion binding;0.0297562611293043!GO:0046426;negative regulation of JAK-STAT cascade;0.0299023145207576!GO:0008283;cell proliferation;0.0301843967854764!GO:0051540;metal cluster binding;0.03041307627886!GO:0051536;iron-sulfur cluster binding;0.03041307627886!GO:0001952;regulation of cell-matrix adhesion;0.030526507564947!GO:0000339;RNA cap binding;0.0307530994001716!GO:0043065;positive regulation of apoptosis;0.030765125402298!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0311433606602145!GO:0006497;protein amino acid lipidation;0.0314487791349673!GO:0000049;tRNA binding;0.0314557267476826!GO:0045936;negative regulation of phosphate metabolic process;0.0314557267476826!GO:0045926;negative regulation of growth;0.0315484760751945!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0315484760751945!GO:0005083;small GTPase regulator activity;0.0315484760751945!GO:0043068;positive regulation of programmed cell death;0.032338359444096!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0324208734740263!GO:0008147;structural constituent of bone;0.033229973483416!GO:0051287;NAD binding;0.0343321365462047!GO:0004287;prolyl oligopeptidase activity;0.0344367435598954!GO:0008320;protein transmembrane transporter activity;0.0348840838573861!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0348840838573861!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0348840838573861!GO:0006904;vesicle docking during exocytosis;0.03502744243642!GO:0006984;ER-nuclear signaling pathway;0.035074295479637!GO:0005912;adherens junction;0.0353490034759388!GO:0016584;nucleosome positioning;0.036352746424957!GO:0000096;sulfur amino acid metabolic process;0.0368898695213185!GO:0005586;collagen type III;0.0369694673435672!GO:0007034;vacuolar transport;0.0372270408981369!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.0378062986377862!GO:0006401;RNA catabolic process;0.0384642249001432!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0385289704145693!GO:0033559;unsaturated fatty acid metabolic process;0.0385289704145693!GO:0006636;unsaturated fatty acid biosynthetic process;0.0385289704145693!GO:0031124;mRNA 3'-end processing;0.0389150392333785!GO:0006611;protein export from nucleus;0.0392274147534072!GO:0044452;nucleolar part;0.0398393744039278!GO:0007569;cell aging;0.0404430557009642!GO:0030833;regulation of actin filament polymerization;0.0404681418246194!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0406180545099708!GO:0044420;extracellular matrix part;0.0409328646029984!GO:0000902;cell morphogenesis;0.042105593804561!GO:0032989;cellular structure morphogenesis;0.042105593804561!GO:0032507;maintenance of cellular protein localization;0.0422447430812291!GO:0001725;stress fiber;0.0426450927048528!GO:0032432;actin filament bundle;0.0426450927048528!GO:0048146;positive regulation of fibroblast proliferation;0.0429277263459819!GO:0005099;Ras GTPase activator activity;0.0432040779139987!GO:0007160;cell-matrix adhesion;0.0442398160157142!GO:0008538;proteasome activator activity;0.0443593703346811!GO:0003684;damaged DNA binding;0.0451319043976897!GO:0030984;kininogen binding;0.0458463970262548!GO:0004213;cathepsin B activity;0.0458463970262548!GO:0030031;cell projection biogenesis;0.0459249240651542!GO:0007021;tubulin folding;0.0463686658726731!GO:0031589;cell-substrate adhesion;0.0472116211931812!GO:0005520;insulin-like growth factor binding;0.0472116211931812!GO:0033673;negative regulation of kinase activity;0.0479649275684143!GO:0006469;negative regulation of protein kinase activity;0.0479649275684143!GO:0043034;costamere;0.0479723247727288!GO:0048593;camera-type eye morphogenesis;0.0484797839664068!GO:0040011;locomotion;0.0490216684882975!GO:0016860;intramolecular oxidoreductase activity;0.0494023845948824!GO:0030119;AP-type membrane coat adaptor complex;0.0495950481739609!GO:0051348;negative regulation of transferase activity;0.0496579461904342!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0496579461904342!GO:0033043;regulation of organelle organization and biogenesis;0.0496579461904342 | |||
|sample_id=11837 | |sample_id=11837 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 99: | ||
|sample_tissue=ovary | |sample_tissue=ovary | ||
|top_motifs=SRF:1.95560344315;UFEwm:1.95303790371;EVI1:1.7122280784;TAL1_TCF{3,4,12}:1.66312341285;ESR1:1.65729556547;ALX4:1.63642206923;HMGA1,2:1.6327583633;ZNF384:1.63007100756;HIF1A:1.57465872906;TEF:1.53208372739;NFE2L1:1.52536864052;NFATC1..3:1.39770692026;PAX4:1.39275338411;GCM1,2:1.3727621256;NR6A1:1.29596984469;GLI1..3:1.27778637866;GATA4:1.27758270603;ZNF238:1.18927778034;TEAD1:1.18155071353;ZBTB6:1.1609697336;NKX3-1:1.16055876279;HES1:1.15738890034;GZF1:1.1551133402;KLF4:1.14523600224;ZIC1..3:1.14345014467;HSF1,2:1.12324739713;NKX2-2,8:1.08980050592;RXRA_VDR{dimer}:1.07990456588;MYBL2:1.03505927345;RXR{A,B,G}:0.983146739194;HMX1:0.967481775896;TLX1..3_NFIC{dimer}:0.962019777095;TBP:0.959423411222;ZBTB16:0.947890312433;TOPORS:0.915120174156;PRDM1:0.913761216298;TP53:0.871115814083;SPZ1:0.801578721226;HOX{A4,D4}:0.764969089691;EN1,2:0.721610798983;TFAP2{A,C}:0.71587974281;XBP1:0.682279284977;HOX{A5,B5}:0.65334306473;ATF6:0.644975600331;GTF2A1,2:0.619445994937;POU1F1:0.587846517908;GFI1B:0.544423863648;MZF1:0.529329982513;EBF1:0.521522772748;NR3C1:0.507932595407;XCPE1{core}:0.507584548732;SOX17:0.482294184961;ONECUT1,2:0.481545787304;TFCP2:0.466478007514;MTE{core}:0.465333064728;CDC5L:0.462499081433;HLF:0.459102389332;MAFB:0.457827249328;NKX3-2:0.433904498626;GTF2I:0.432526036979;TBX4,5:0.424641445761;TFAP2B:0.395973126977;NHLH1,2:0.342024443121;FOXD3:0.341536598413;POU3F1..4:0.339438361862;NFE2L2:0.329108093718;MYFfamily:0.304592785513;AIRE:0.290262393594;POU6F1:0.286585463143;IRF1,2:0.253868759724;NKX2-1,4:0.249576573218;BACH2:0.24894857838;FOXP1:0.247392020575;PAX3,7:0.239058710655;MAZ:0.235574580188;FOXL1:0.19877225736;IKZF1:0.195903264395;TFDP1:0.194240301974;PAX2:0.182047260604;MED-1{core}:0.143324811117;ZFP161:0.137389936364;HNF1A:0.122316551494;FOS_FOS{B,L1}_JUN{B,D}:0.120282219825;HAND1,2:0.0782364549981;PATZ1:0.0697286570834;SOX2:0.0660591771168;TLX2:0.0631793621769;SMAD1..7,9:0.0556595846959;AHR_ARNT_ARNT2:0.0140851644541;PAX8:0.00481643278736;ALX1:-0.0104450274075;REST:-0.0128056958878;NFE2:-0.0260746023554;TFAP4:-0.0287494531496;HIC1:-0.0305245788882;NFIX:-0.0400619765548;RREB1:-0.0430262113364;AR:-0.0508633981595;ZNF148:-0.064904537364;PPARG:-0.0662539778463;NKX6-1,2:-0.0810101136685;PITX1..3:-0.0919646591885;LHX3,4:-0.100193978662;PAX5:-0.101992224371;STAT2,4,6:-0.107973035431;POU2F1..3:-0.109046775593;EGR1..3:-0.109583607513;SP1:-0.110661527766;SOX5:-0.111492036538;MEF2{A,B,C,D}:-0.11413438326;NANOG{mouse}:-0.123673429355;FOSL2:-0.143799035149;NFKB1_REL_RELA:-0.145933405125;bHLH_family:-0.164332598699;LEF1_TCF7_TCF7L1,2:-0.18362820127;CDX1,2,4:-0.185216550534;T:-0.201088244174;ATF2:-0.219757566727;MYB:-0.233718937611;RUNX1..3:-0.237761127993;HOX{A6,A7,B6,B7}:-0.253996276971;HOXA9_MEIS1:-0.27866599905;SREBF1,2:-0.288864378622;BPTF:-0.307038875101;FOX{I1,J2}:-0.355980270104;CRX:-0.362375979695;ZNF423:-0.368609128223;RFX1:-0.386643591139;IRF7:-0.390520361822;ELK1,4_GABP{A,B1}:-0.395510558464;CEBPA,B_DDIT3:-0.419705336912;JUN:-0.421057346138;ETS1,2:-0.425525944691;ESRRA:-0.427821020502;YY1:-0.438043262931;PAX1,9:-0.450185500658;HNF4A_NR2F1,2:-0.458084320916;NR1H4:-0.460082508953;FOXP3:-0.460957723962;PAX6:-0.468778492198;FOX{D1,D2}:-0.473900344244;FOXM1:-0.483491631763;SPIB:-0.4960777255;ADNP_IRX_SIX_ZHX:-0.506691513858;NR5A1,2:-0.509442370922;FOXN1:-0.51289583473;DBP:-0.513170264503;SNAI1..3:-0.544139399232;MYOD1:-0.546318714666;ZNF143:-0.552295756117;FOXO1,3,4:-0.559589473641;OCT4_SOX2{dimer}:-0.560754513556;DMAP1_NCOR{1,2}_SMARC:-0.56489087222;NRF1:-0.572782112093;STAT1,3:-0.576821938456;SOX{8,9,10}:-0.587122325191;EP300:-0.587604999713;LMO2:-0.60478489957;ARID5B:-0.606195039662;FOXA2:-0.608549062416;CREB1:-0.60888531042;SPI1:-0.613258586391;HBP1_HMGB_SSRP1_UBTF:-0.631643174179;POU5F1:-0.659021062241;E2F1..5:-0.694263224401;STAT5{A,B}:-0.715131279586;IKZF2:-0.718055469591;NFIL3:-0.719095819315;ATF4:-0.72923393034;ELF1,2,4:-0.735988632479;ATF5_CREB3:-0.741274839296;MTF1:-0.771702370339;ZEB1:-0.846219277891;CUX2:-0.908810596294;PRRX1,2:-0.918493980239;TGIF1:-0.927066126894;GATA6:-1.00532059087;RBPJ:-1.02887705749;RFX2..5_RFXANK_RFXAP:-1.07448823882;GFI1:-1.09444122617;NKX2-3_NKX2-5:-1.12204198813;BREu{core}:-1.14924777757;RORA:-1.17216113566;VSX1,2:-1.17713427128;FOX{F1,F2,J1}:-1.2178834472;PBX1:-1.3602772503;NFY{A,B,C}:-1.41634628705;NANOG:-1.43039624838;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.50000571749;FOXQ1:-1.60270950937;PDX1:-1.62956719012;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.81637524077 | |top_motifs=SRF:1.95560344315;UFEwm:1.95303790371;EVI1:1.7122280784;TAL1_TCF{3,4,12}:1.66312341285;ESR1:1.65729556547;ALX4:1.63642206923;HMGA1,2:1.6327583633;ZNF384:1.63007100756;HIF1A:1.57465872906;TEF:1.53208372739;NFE2L1:1.52536864052;NFATC1..3:1.39770692026;PAX4:1.39275338411;GCM1,2:1.3727621256;NR6A1:1.29596984469;GLI1..3:1.27778637866;GATA4:1.27758270603;ZNF238:1.18927778034;TEAD1:1.18155071353;ZBTB6:1.1609697336;NKX3-1:1.16055876279;HES1:1.15738890034;GZF1:1.1551133402;KLF4:1.14523600224;ZIC1..3:1.14345014467;HSF1,2:1.12324739713;NKX2-2,8:1.08980050592;RXRA_VDR{dimer}:1.07990456588;MYBL2:1.03505927345;RXR{A,B,G}:0.983146739194;HMX1:0.967481775896;TLX1..3_NFIC{dimer}:0.962019777095;TBP:0.959423411222;ZBTB16:0.947890312433;TOPORS:0.915120174156;PRDM1:0.913761216298;TP53:0.871115814083;SPZ1:0.801578721226;HOX{A4,D4}:0.764969089691;EN1,2:0.721610798983;TFAP2{A,C}:0.71587974281;XBP1:0.682279284977;HOX{A5,B5}:0.65334306473;ATF6:0.644975600331;GTF2A1,2:0.619445994937;POU1F1:0.587846517908;GFI1B:0.544423863648;MZF1:0.529329982513;EBF1:0.521522772748;NR3C1:0.507932595407;XCPE1{core}:0.507584548732;SOX17:0.482294184961;ONECUT1,2:0.481545787304;TFCP2:0.466478007514;MTE{core}:0.465333064728;CDC5L:0.462499081433;HLF:0.459102389332;MAFB:0.457827249328;NKX3-2:0.433904498626;GTF2I:0.432526036979;TBX4,5:0.424641445761;TFAP2B:0.395973126977;NHLH1,2:0.342024443121;FOXD3:0.341536598413;POU3F1..4:0.339438361862;NFE2L2:0.329108093718;MYFfamily:0.304592785513;AIRE:0.290262393594;POU6F1:0.286585463143;IRF1,2:0.253868759724;NKX2-1,4:0.249576573218;BACH2:0.24894857838;FOXP1:0.247392020575;PAX3,7:0.239058710655;MAZ:0.235574580188;FOXL1:0.19877225736;IKZF1:0.195903264395;TFDP1:0.194240301974;PAX2:0.182047260604;MED-1{core}:0.143324811117;ZFP161:0.137389936364;HNF1A:0.122316551494;FOS_FOS{B,L1}_JUN{B,D}:0.120282219825;HAND1,2:0.0782364549981;PATZ1:0.0697286570834;SOX2:0.0660591771168;TLX2:0.0631793621769;SMAD1..7,9:0.0556595846959;AHR_ARNT_ARNT2:0.0140851644541;PAX8:0.00481643278736;ALX1:-0.0104450274075;REST:-0.0128056958878;NFE2:-0.0260746023554;TFAP4:-0.0287494531496;HIC1:-0.0305245788882;NFIX:-0.0400619765548;RREB1:-0.0430262113364;AR:-0.0508633981595;ZNF148:-0.064904537364;PPARG:-0.0662539778463;NKX6-1,2:-0.0810101136685;PITX1..3:-0.0919646591885;LHX3,4:-0.100193978662;PAX5:-0.101992224371;STAT2,4,6:-0.107973035431;POU2F1..3:-0.109046775593;EGR1..3:-0.109583607513;SP1:-0.110661527766;SOX5:-0.111492036538;MEF2{A,B,C,D}:-0.11413438326;NANOG{mouse}:-0.123673429355;FOSL2:-0.143799035149;NFKB1_REL_RELA:-0.145933405125;bHLH_family:-0.164332598699;LEF1_TCF7_TCF7L1,2:-0.18362820127;CDX1,2,4:-0.185216550534;T:-0.201088244174;ATF2:-0.219757566727;MYB:-0.233718937611;RUNX1..3:-0.237761127993;HOX{A6,A7,B6,B7}:-0.253996276971;HOXA9_MEIS1:-0.27866599905;SREBF1,2:-0.288864378622;BPTF:-0.307038875101;FOX{I1,J2}:-0.355980270104;CRX:-0.362375979695;ZNF423:-0.368609128223;RFX1:-0.386643591139;IRF7:-0.390520361822;ELK1,4_GABP{A,B1}:-0.395510558464;CEBPA,B_DDIT3:-0.419705336912;JUN:-0.421057346138;ETS1,2:-0.425525944691;ESRRA:-0.427821020502;YY1:-0.438043262931;PAX1,9:-0.450185500658;HNF4A_NR2F1,2:-0.458084320916;NR1H4:-0.460082508953;FOXP3:-0.460957723962;PAX6:-0.468778492198;FOX{D1,D2}:-0.473900344244;FOXM1:-0.483491631763;SPIB:-0.4960777255;ADNP_IRX_SIX_ZHX:-0.506691513858;NR5A1,2:-0.509442370922;FOXN1:-0.51289583473;DBP:-0.513170264503;SNAI1..3:-0.544139399232;MYOD1:-0.546318714666;ZNF143:-0.552295756117;FOXO1,3,4:-0.559589473641;OCT4_SOX2{dimer}:-0.560754513556;DMAP1_NCOR{1,2}_SMARC:-0.56489087222;NRF1:-0.572782112093;STAT1,3:-0.576821938456;SOX{8,9,10}:-0.587122325191;EP300:-0.587604999713;LMO2:-0.60478489957;ARID5B:-0.606195039662;FOXA2:-0.608549062416;CREB1:-0.60888531042;SPI1:-0.613258586391;HBP1_HMGB_SSRP1_UBTF:-0.631643174179;POU5F1:-0.659021062241;E2F1..5:-0.694263224401;STAT5{A,B}:-0.715131279586;IKZF2:-0.718055469591;NFIL3:-0.719095819315;ATF4:-0.72923393034;ELF1,2,4:-0.735988632479;ATF5_CREB3:-0.741274839296;MTF1:-0.771702370339;ZEB1:-0.846219277891;CUX2:-0.908810596294;PRRX1,2:-0.918493980239;TGIF1:-0.927066126894;GATA6:-1.00532059087;RBPJ:-1.02887705749;RFX2..5_RFXANK_RFXAP:-1.07448823882;GFI1:-1.09444122617;NKX2-3_NKX2-5:-1.12204198813;BREu{core}:-1.14924777757;RORA:-1.17216113566;VSX1,2:-1.17713427128;FOX{F1,F2,J1}:-1.2178834472;PBX1:-1.3602772503;NFY{A,B,C}:-1.41634628705;NANOG:-1.43039624838;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.50000571749;FOXQ1:-1.60270950937;PDX1:-1.62956719012;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.81637524077 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11837-124H1;search_select_hide=table117:FF:11837-124H1 | |||
}} | }} | ||
Latest revision as of 18:23, 4 June 2020
| Name: | mesenchymal precursor cell - ovarian cancer right ovary, donor4 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs13096 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13096
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13096
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.63 |
| 10 | 10 | 0.894 |
| 100 | 100 | 0.826 |
| 101 | 101 | 0.849 |
| 102 | 102 | 0.42 |
| 103 | 103 | 0.944 |
| 104 | 104 | 0.969 |
| 105 | 105 | 0.0314 |
| 106 | 106 | 0.00388 |
| 107 | 107 | 0.0211 |
| 108 | 108 | 0.11 |
| 109 | 109 | 0.536 |
| 11 | 11 | 0.731 |
| 110 | 110 | 0.277 |
| 111 | 111 | 0.741 |
| 112 | 112 | 0.216 |
| 113 | 113 | 0.423 |
| 114 | 114 | 0.136 |
| 115 | 115 | 0.0811 |
| 116 | 116 | 0.112 |
| 117 | 117 | 0.882 |
| 118 | 118 | 0.816 |
| 119 | 119 | 0.69 |
| 12 | 12 | 0.28 |
| 120 | 120 | 0.0938 |
| 121 | 121 | 0.668 |
| 122 | 122 | 0.0196 |
| 123 | 123 | 0.355 |
| 124 | 124 | 0.198 |
| 125 | 125 | 0.821 |
| 126 | 126 | 0.987 |
| 127 | 127 | 0.454 |
| 128 | 128 | 0.225 |
| 129 | 129 | 0.603 |
| 13 | 13 | 0.443 |
| 130 | 130 | 0.304 |
| 131 | 131 | 0.42 |
| 132 | 132 | 0.319 |
| 133 | 133 | 0.591 |
| 134 | 134 | 0.868 |
| 135 | 135 | 0.455 |
| 136 | 136 | 0.928 |
| 137 | 137 | 0.244 |
| 138 | 138 | 0.72 |
| 139 | 139 | 0.23 |
| 14 | 14 | 0.179 |
| 140 | 140 | 0.429 |
| 141 | 141 | 0.71 |
| 142 | 142 | 0.979 |
| 143 | 143 | 0.766 |
| 144 | 144 | 0.264 |
| 145 | 145 | 0.246 |
| 146 | 146 | 0.509 |
| 147 | 147 | 0.05 |
| 148 | 148 | 0.835 |
| 149 | 149 | 0.0737 |
| 15 | 15 | 0.972 |
| 150 | 150 | 0.119 |
| 151 | 151 | 0.534 |
| 152 | 152 | 0.0318 |
| 153 | 153 | 0.775 |
| 154 | 154 | 0.781 |
| 155 | 155 | 0.0707 |
| 156 | 156 | 0.868 |
| 157 | 157 | 0.786 |
| 158 | 158 | 0.315 |
| 159 | 159 | 0.877 |
| 16 | 16 | 0.0866 |
| 160 | 160 | 0.723 |
| 161 | 161 | 0.911 |
| 162 | 162 | 0.182 |
| 163 | 163 | 0.121 |
| 164 | 164 | 0.017 |
| 165 | 165 | 0.693 |
| 166 | 166 | 0.0873 |
| 167 | 167 | 0.439 |
| 168 | 168 | 0.492 |
| 169 | 169 | 0.202 |
| 17 | 17 | 0.309 |
| 18 | 18 | 0.248 |
| 19 | 19 | 0.0264 |
| 2 | 2 | 0.422 |
| 20 | 20 | 0.579 |
| 21 | 21 | 0.182 |
| 22 | 22 | 0.856 |
| 23 | 23 | 0.109 |
| 24 | 24 | 0.568 |
| 25 | 25 | 0.0417 |
| 26 | 26 | 0.799 |
| 27 | 27 | 0.698 |
| 28 | 28 | 0.283 |
| 29 | 29 | 0.698 |
| 3 | 3 | 0.505 |
| 30 | 30 | 0.915 |
| 31 | 31 | 0.899 |
| 32 | 32 | 1.08368e-8 |
| 33 | 33 | 0.567 |
| 34 | 34 | 0.936 |
| 35 | 35 | 0.601 |
| 36 | 36 | 0.0573 |
| 37 | 37 | 0.0902 |
| 38 | 38 | 0.503 |
| 39 | 39 | 0.217 |
| 4 | 4 | 0.355 |
| 40 | 40 | 0.549 |
| 41 | 41 | 0.835 |
| 42 | 42 | 0.46 |
| 43 | 43 | 0.912 |
| 44 | 44 | 0.543 |
| 45 | 45 | 0.556 |
| 46 | 46 | 0.294 |
| 47 | 47 | 0.441 |
| 48 | 48 | 0.748 |
| 49 | 49 | 0.743 |
| 5 | 5 | 0.713 |
| 50 | 50 | 0.403 |
| 51 | 51 | 0.922 |
| 52 | 52 | 0.886 |
| 53 | 53 | 0.236 |
| 54 | 54 | 0.808 |
| 55 | 55 | 0.36 |
| 56 | 56 | 0.967 |
| 57 | 57 | 0.545 |
| 58 | 58 | 0.181 |
| 59 | 59 | 0.601 |
| 6 | 6 | 0.532 |
| 60 | 60 | 0.974 |
| 61 | 61 | 0.406 |
| 62 | 62 | 0.781 |
| 63 | 63 | 0.312 |
| 64 | 64 | 0.347 |
| 65 | 65 | 0.719 |
| 66 | 66 | 0.0386 |
| 67 | 67 | 0.387 |
| 68 | 68 | 0.629 |
| 69 | 69 | 0.536 |
| 7 | 7 | 0.0634 |
| 70 | 70 | 0.112 |
| 71 | 71 | 0.435 |
| 72 | 72 | 0.611 |
| 73 | 73 | 0.0173 |
| 74 | 74 | 0.14 |
| 75 | 75 | 0.941 |
| 76 | 76 | 0.821 |
| 77 | 77 | 0.12 |
| 78 | 78 | 0.777 |
| 79 | 79 | 8.02402e-4 |
| 8 | 8 | 0.159 |
| 80 | 80 | 0.141 |
| 81 | 81 | 0.905 |
| 82 | 82 | 0.894 |
| 83 | 83 | 0.407 |
| 84 | 84 | 0.645 |
| 85 | 85 | 0.0441 |
| 86 | 86 | 0.827 |
| 87 | 87 | 0.695 |
| 88 | 88 | 0.651 |
| 89 | 89 | 0.568 |
| 9 | 9 | 0.951 |
| 90 | 90 | 0.853 |
| 91 | 91 | 0.331 |
| 92 | 92 | 0.413 |
| 93 | 93 | 0.781 |
| 94 | 94 | 0.615 |
| 95 | 95 | 0.75 |
| 96 | 96 | 0.663 |
| 97 | 97 | 0.516 |
| 98 | 98 | 0.32 |
| 99 | 99 | 0.0406 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs13096
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000275 human mesenchymal precursor cell- ovarian cancer-right ovary sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000034 (stem cell)
DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
193 (reproductive organ cancer)
2394 (ovarian cancer)
120 (female reproductive organ cancer)
UBERON: Anatomy
0000468 (multi-cellular organism)
0000992 (female gonad)
0000991 (gonad)
0002384 (connective tissue)
0003134 (female reproductive organ)
0000479 (tissue)
0005156 (reproductive structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003133 (reproductive organ)
0002323 (body cavity)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)
0002118 (right ovary)
0003100 (female organism)
0000474 (female reproductive system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000272 (human ovarian cancer mesenchymal precursor cell sample)
0000275 (human mesenchymal precursor cell- ovarian cancer-right ovary sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
