FFCP PHASE1:Hg19::chr12:52437488..52437507,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3164 | |EntrezGene=3164 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7980 | |HGNC=7980 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_ENST00000478250_5end | |association_with_transcript=-3bp_to_ENST00000478250_5end | ||
|cluster_id=chr12:52437488..52437507,+ | |||
|coexpression_cluster_id=C20 | |coexpression_cluster_id=C20 | ||
|description=CAGE_peak_2_at_NR4A1_5end | |description=CAGE_peak_2_at_NR4A1_5end | ||
|id=chr12:52437488..52437507,+ | |id=chr12:52437488..52437507,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.19e-11;82!UBERON:0006603;1.25e-08;65!UBERON:0002532;1.42e-07;206!UBERON:0010316;1.42e-07;206 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.86e-77!115;UBERON:0001049!7.74e-26!57;UBERON:0005068!7.74e-26!57;UBERON:0006241!7.74e-26!57;UBERON:0007135!7.74e-26!57;UBERON:0002616!2.81e-20!59;UBERON:0003080!7.95e-20!42;UBERON:0003075!1.00e-19!86;UBERON:0007284!1.00e-19!86;UBERON:0002780!7.07e-19!41;UBERON:0001890!7.07e-19!41;UBERON:0006240!7.07e-19!41;UBERON:0001017!2.33e-18!82;UBERON:0002346!3.92e-18!90;UBERON:0005743!7.23e-18!86;UBERON:0000955!2.98e-17!69;UBERON:0006238!2.98e-17!69;UBERON:0000153!3.59e-17!129;UBERON:0007811!3.59e-17!129;UBERON:0001893!1.15e-16!34;UBERON:0002020!2.39e-16!34;UBERON:0003528!2.39e-16!34;UBERON:0002791!6.34e-16!33;UBERON:0000073!1.01e-15!94;UBERON:0001016!1.01e-15!94;UBERON:0000033!1.65e-15!123;UBERON:0001869!5.52e-15!32;UBERON:0002619!4.57e-14!22;UBERON:0000477!6.69e-14!286;UBERON:0001950!1.24e-12!20;UBERON:0004121!2.97e-12!169;UBERON:0003056!3.02e-12!61;UBERON:0000481!3.27e-12!347;UBERON:0004111!5.99e-12!241;UBERON:0000956!9.89e-12!25;UBERON:0000203!9.89e-12!25;UBERON:0000924!1.52e-11!173;UBERON:0006601!1.52e-11!173;UBERON:0000062!1.86e-11!511;UBERON:0000475!7.92e-09!365;UBERON:0002298!1.13e-08!8;UBERON:0000025!1.46e-08!194;UBERON:0000468!1.72e-08!659;UBERON:0000467!1.23e-07!625;UBERON:0000480!1.46e-07!626;UBERON:0000922!2.00e-07!612;UBERON:0003076!3.34e-07!15;UBERON:0003057!3.34e-07!15;UBERON:0000923!3.86e-07!604;UBERON:0005291!3.86e-07!604;UBERON:0006598!3.86e-07!604;UBERON:0002532!3.86e-07!604;UBERON:0002050!4.57e-07!605;UBERON:0005423!4.57e-07!605 | |ontology_enrichment_uberon=UBERON:0007023!3.86e-77!115;UBERON:0001049!7.74e-26!57;UBERON:0005068!7.74e-26!57;UBERON:0006241!7.74e-26!57;UBERON:0007135!7.74e-26!57;UBERON:0002616!2.81e-20!59;UBERON:0003080!7.95e-20!42;UBERON:0003075!1.00e-19!86;UBERON:0007284!1.00e-19!86;UBERON:0002780!7.07e-19!41;UBERON:0001890!7.07e-19!41;UBERON:0006240!7.07e-19!41;UBERON:0001017!2.33e-18!82;UBERON:0002346!3.92e-18!90;UBERON:0005743!7.23e-18!86;UBERON:0000955!2.98e-17!69;UBERON:0006238!2.98e-17!69;UBERON:0000153!3.59e-17!129;UBERON:0007811!3.59e-17!129;UBERON:0001893!1.15e-16!34;UBERON:0002020!2.39e-16!34;UBERON:0003528!2.39e-16!34;UBERON:0002791!6.34e-16!33;UBERON:0000073!1.01e-15!94;UBERON:0001016!1.01e-15!94;UBERON:0000033!1.65e-15!123;UBERON:0001869!5.52e-15!32;UBERON:0002619!4.57e-14!22;UBERON:0000477!6.69e-14!286;UBERON:0001950!1.24e-12!20;UBERON:0004121!2.97e-12!169;UBERON:0003056!3.02e-12!61;UBERON:0000481!3.27e-12!347;UBERON:0004111!5.99e-12!241;UBERON:0000956!9.89e-12!25;UBERON:0000203!9.89e-12!25;UBERON:0000924!1.52e-11!173;UBERON:0006601!1.52e-11!173;UBERON:0000062!1.86e-11!511;UBERON:0000475!7.92e-09!365;UBERON:0002298!1.13e-08!8;UBERON:0000025!1.46e-08!194;UBERON:0000468!1.72e-08!659;UBERON:0000467!1.23e-07!625;UBERON:0000480!1.46e-07!626;UBERON:0000922!2.00e-07!612;UBERON:0003076!3.34e-07!15;UBERON:0003057!3.34e-07!15;UBERON:0000923!3.86e-07!604;UBERON:0005291!3.86e-07!604;UBERON:0006598!3.86e-07!604;UBERON:0002532!3.86e-07!604;UBERON:0002050!4.57e-07!605;UBERON:0005423!4.57e-07!605 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.10e-22;114!UBERON:0002780;1.81e-10;41!UBERON:0001890;1.81e-10;41!UBERON:0001893;1.90e-10;34!UBERON:0000073;5.14e-10;53!UBERON:0002616;5.14e-10;53!UBERON:0002791;2.48e-09;32!UBERON:0001869;2.73e-09;32!UBERON:0002619;5.63e-09;22!UBERON:0001950;1.43e-08;20!UBERON:0003528;2.25e-08;34!UBERON:0002020;2.25e-08;34!UBERON:0000956;1.32e-07;25!UBERON:0000203;1.32e-07;25!UBERON:0003978;2.84e-07;3!UBERON:0000946;2.84e-07;3!UBERON:0002298;5.07e-07;6!UBERON:0004732;5.85e-07;13!UBERON:0004151;6.44e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.60e-88,114;UBERON:0001049,3.51e-20,56;UBERON:0005068,3.51e-20,56;UBERON:0006241,3.51e-20,56;UBERON:0007135,3.51e-20,56;UBERON:0000073,3.29e-17,53;UBERON:0002616,3.29e-17,53;UBERON:0003075,4.60e-17,82;UBERON:0007284,4.60e-17,82;UBERON:0002346,8.23e-16,86;UBERON:0010314,2.27e-15,132;UBERON:0001017,2.35e-15,81;UBERON:0001016,5.90e-14,89;UBERON:0000955,1.17e-13,68;UBERON:0006238,1.17e-13,68;UBERON:0011216,8.52e-13,223;UBERON:0002780,9.07e-13,41;UBERON:0001890,9.07e-13,41;UBERON:0003080,9.07e-13,41;UBERON:0006240,9.07e-13,41;UBERON:0010371,2.15e-12,104;UBERON:0001893,8.16e-12,34;UBERON:0004121,2.81e-11,171;UBERON:0000924,2.81e-11,171;UBERON:0006601,2.81e-11,171;UBERON:0003528,2.72e-10,34;UBERON:0002020,2.72e-10,34;UBERON:0004111,6.38e-10,240;UBERON:0002791,6.78e-10,32;UBERON:0001869,7.24e-10,32;UBERON:0003076,4.50e-09,15;UBERON:0003057,4.50e-09,15;UBERON:0002619,5.15e-09,22;UBERON:0003056,1.04e-08,61;UBERON:0001950,1.31e-08,20;UBERON:0000956,1.22e-07,25;UBERON:0000203,1.22e-07,25;UBERON:0003978,2.90e-07,3;UBERON:0009751,2.90e-07,3;UBERON:0000946,2.90e-07,3;UBERON:0002523,2.90e-07,3;UBERON:0005983,2.90e-07,3;UBERON:0002165,2.90e-07,3;UBERON:0002062,2.90e-07,3;UBERON:0007280,2.90e-07,3;UBERON:0003103,4.45e-07,68;UBERON:0000025,4.97e-07,192;UBERON:0002298,5.18e-07,6;UBERON:0004732,5.51e-07,13;UBERON:0004151,6.57e-07,3 | |||
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|short_description=p2@NR4A1 | |short_description=p2@NR4A1 | ||
}} | }} |
Latest revision as of 21:05, 18 September 2015
Short description: | p2@NR4A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NR4A1_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -3bp_to_ENST00000478250_5end |
EntrezGene: | NR4A1 |
HGNC: | 7980 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data