FFCP PHASE1:Hg19::chr19:13213399..13213414,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4066 | |EntrezGene=4066 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6734 | |HGNC=6734 | ||
|TSSclassifier=strong | |||
|UniProt=P12980 | |UniProt=P12980 | ||
|association_with_transcript=266bp_to_ENST00000264824,uc002mwi.2_5end | |association_with_transcript=266bp_to_ENST00000264824,uc002mwi.2_5end | ||
|cluster_id=chr19:13213399..13213414,- | |||
|coexpression_cluster_id=C140 | |coexpression_cluster_id=C140 | ||
|description=CAGE_peak_6_at_LYL1_5end | |description=CAGE_peak_6_at_LYL1_5end | ||
|id=chr19:13213399..13213414,- | |id=chr19:13213399..13213414,- | ||
|ontology_enrichment_celltype=CL:0000115!3.48e-26!35;CL:0000213!4.60e-23!57;CL:0000215!4.60e-23!57;CL:0002078!2.10e-22!44;CL:0002139!2.72e-19!24;CL:0000071!1.78e-15!18;CL:0002546!1.78e-15!18;CL:0000222!5.51e-15!119;CL:0000763!5.95e-13!112;CL:0000049!5.95e-13!112;CL:0000839!2.63e-09!70;CL:1000413!1.33e-08!9;CL:0000557!1.80e-07!71;CL:0000766!5.54e-07!76 | |ontology_enrichment_celltype=CL:0000115!3.48e-26!35;CL:0000213!4.60e-23!57;CL:0000215!4.60e-23!57;CL:0002078!2.10e-22!44;CL:0002139!2.72e-19!24;CL:0000071!1.78e-15!18;CL:0002546!1.78e-15!18;CL:0000222!5.51e-15!119;CL:0000763!5.95e-13!112;CL:0000049!5.95e-13!112;CL:0000839!2.63e-09!70;CL:1000413!1.33e-08!9;CL:0000557!1.80e-07!71;CL:0000766!5.54e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000115;4.58e-45;36!CL:0002139;3.42e-40;24!CL:0000071;4.91e-34;18!CL:0002078;3.20e-26;45!CL:0000213;1.53e-19;58!CL:0000215;1.53e-19;58!CL:1000413;5.83e-18;9!CL:0002544;1.79e-12;6!CL:0002543;2.18e-12;6!CL:0002188;2.78e-10;5!CL:0002138;4.65e-08;6!CL:1000746;3.75e-07;7!CL:1000612;3.75e-07;7!CL:0000235;5.73e-07;6!CL:0002144;6.13e-07;3!CL:0002618;6.87e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.36e-53,36;CL:0002078,1.65e-40,45;CL:0002139,2.99e-40,24;CL:0000213,2.13e-34,58;CL:0000215,2.13e-34,58;CL:0000071,4.94e-34,18;CL:0002546,4.94e-34,18;CL:0000222,7.78e-21,121;CL:1000413,5.85e-18,9;CL:0000763,5.91e-14,108;CL:0000049,5.91e-14,108;CL:0002544,1.77e-12,6;CL:0002543,2.26e-12,6;CL:0002188,2.40e-10,5;CL:0000076,3.99e-08,63;CL:0005020,4.14e-08,6;CL:0002138,4.14e-08,6;CL:0005022,4.14e-08,6;CL:0000839,4.77e-08,66;CL:1000746,3.39e-07,7;CL:1000612,3.39e-07,7;CL:0000235,3.68e-07,6;CL:0002144,5.94e-07,3;CL:0002618,7.19e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;4.91e-34;18!CL:0005022;4.65e-08;6!CL:0000222;6.09e-08;121 | |||
|ontology_enrichment_disease=DOID:8692!6.90e-10!31;DOID:1240!2.19e-07!39 | |ontology_enrichment_disease=DOID:8692!6.90e-10!31;DOID:1240!2.19e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:8692;4.87e-12;31!DOID:1036;7.28e-10;8!DOID:1240;1.78e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.90e-12,31;DOID:1036,4.44e-10,8;DOID:1240,8.07e-09,39 | |||
|ontology_enrichment_uberon=UBERON:0003081!9.54e-19!216;UBERON:0001009!5.12e-16!113;UBERON:0004535!1.29e-15!110;UBERON:0001986!1.78e-15!18;UBERON:0004638!1.78e-15!18;UBERON:0004852!1.78e-15!18;UBERON:0000487!8.68e-14!22;UBERON:0000055!1.93e-13!69;UBERON:0002049!2.48e-13!79;UBERON:0007798!2.48e-13!79;UBERON:0006914!6.17e-13!25;UBERON:0003914!8.01e-12!118;UBERON:0002405!1.57e-11!115;UBERON:0002193!4.88e-11!112;UBERON:0004872!4.92e-11!84;UBERON:0001981!5.25e-10!60;UBERON:0007500!5.25e-10!60;UBERON:0004537!5.25e-10!60;UBERON:0006965!5.25e-10!60;UBERON:0003915!1.33e-08!9;UBERON:0004700!1.33e-08!9;UBERON:0001917!1.33e-08!9;UBERON:0002390!1.02e-07!102;UBERON:0003061!1.02e-07!102 | |ontology_enrichment_uberon=UBERON:0003081!9.54e-19!216;UBERON:0001009!5.12e-16!113;UBERON:0004535!1.29e-15!110;UBERON:0001986!1.78e-15!18;UBERON:0004638!1.78e-15!18;UBERON:0004852!1.78e-15!18;UBERON:0000487!8.68e-14!22;UBERON:0000055!1.93e-13!69;UBERON:0002049!2.48e-13!79;UBERON:0007798!2.48e-13!79;UBERON:0006914!6.17e-13!25;UBERON:0003914!8.01e-12!118;UBERON:0002405!1.57e-11!115;UBERON:0002193!4.88e-11!112;UBERON:0004872!4.92e-11!84;UBERON:0001981!5.25e-10!60;UBERON:0007500!5.25e-10!60;UBERON:0004537!5.25e-10!60;UBERON:0006965!5.25e-10!60;UBERON:0003915!1.33e-08!9;UBERON:0004700!1.33e-08!9;UBERON:0001917!1.33e-08!9;UBERON:0002390!1.02e-07!102;UBERON:0003061!1.02e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.91e-34;18!UBERON:0001986;4.91e-34;18!UBERON:0004852;4.91e-34;18!UBERON:0000487;1.77e-29;22!UBERON:0006914;3.67e-25;25!UBERON:0003915;5.83e-18;9!UBERON:0004700;5.83e-18;9!UBERON:0001917;5.83e-18;9!UBERON:0000490;2.20e-16;33!UBERON:0000055;1.43e-13;65!UBERON:0007500;4.71e-13;56!UBERON:0001981;4.71e-13;56!UBERON:0004537;4.71e-13;56!UBERON:0003914;1.06e-10;74!UBERON:0001473;1.15e-10;8!UBERON:0004536;1.15e-10;8!UBERON:0006558;1.15e-10;8!UBERON:0002049;2.11e-09;75!UBERON:0007798;2.11e-09;75!UBERON:0001637;9.27e-09;42!UBERON:0003509;9.27e-09;42!UBERON:0004572;9.27e-09;42!UBERON:0002465;2.88e-08;10!UBERON:0001638;6.96e-08;9!UBERON:0003920;6.96e-08;9!UBERON:0004582;6.96e-08;9!UBERON:0000074;3.75e-07;7!UBERON:0001229;3.75e-07;7!UBERON:0001009;5.88e-07;112!UBERON:0010523;6.13e-07;3!UBERON:0001915;6.13e-07;3!UBERON:0001982;6.13e-07;3 | |||
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| ||
|short_description=p6@LYL1 | |short_description=p6@LYL1 | ||
}} | }} |
Latest revision as of 00:02, 16 September 2015
Short description: | p6@LYL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LYL1_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 266bp_to_ENST00000264824, uc002mwi.2_5end |
EntrezGene: | LYL1 |
HGNC: | 6734 |
UniProt: | P12980 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.36e-53 | 36 |
meso-epithelial cell | 1.65e-40 | 45 |
endothelial cell of vascular tree | 2.99e-40 | 24 |
lining cell | 2.13e-34 | 58 |
barrier cell | 2.13e-34 | 58 |
blood vessel endothelial cell | 4.94e-34 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.94e-34 | 18 |
mesodermal cell | 7.78e-21 | 121 |
endothelial cell of artery | 5.85e-18 | 9 |
myeloid cell | 5.91e-14 | 108 |
common myeloid progenitor | 5.91e-14 | 108 |
aortic endothelial cell | 1.77e-12 | 6 |
vein endothelial cell | 2.26e-12 | 6 |
glomerular endothelial cell | 2.40e-10 | 5 |
squamous epithelial cell | 3.99e-08 | 63 |
lymphangioblast | 4.14e-08 | 6 |
endothelial cell of lymphatic vessel | 4.14e-08 | 6 |
vascular lymphangioblast | 4.14e-08 | 6 |
myeloid lineage restricted progenitor cell | 4.77e-08 | 66 |
glomerular cell | 3.39e-07 | 7 |
kidney corpuscule cell | 3.39e-07 | 7 |
macrophage | 3.68e-07 | 6 |
capillary endothelial cell | 5.94e-07 | 3 |
endothelial cell of umbilical vein | 7.19e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.90e-12 | 31 |
chronic leukemia | 4.44e-10 | 8 |
leukemia | 8.07e-09 | 39 |