FFCP PHASE1:Hg19::chr2:152955213..152955292,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=785 | |EntrezGene=785 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1404 | |HGNC=1404 | ||
|TSSclassifier=strong | |||
|UniProt=B4DG40 | |UniProt=B4DG40 | ||
|association_with_transcript=0bp_to_ENST00000427385,NM_001005746,uc002txz.2_5end | |association_with_transcript=0bp_to_ENST00000427385,NM_001005746,uc002txz.2_5end | ||
|cluster_id=chr2:152955213..152955292,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_CACNB4_5end | |description=CAGE_peak_1_at_CACNB4_5end | ||
|id=chr2:152955213..152955292,- | |id=chr2:152955213..152955292,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.28e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.82e-32!115;UBERON:0001017!6.94e-30!82;UBERON:0005743!4.32e-29!86;UBERON:0000073!1.20e-27!94;UBERON:0001016!1.20e-27!94;UBERON:0001049!3.70e-26!57;UBERON:0005068!3.70e-26!57;UBERON:0006241!3.70e-26!57;UBERON:0007135!3.70e-26!57;UBERON:0000955!3.20e-24!69;UBERON:0006238!3.20e-24!69;UBERON:0003080!3.35e-24!42;UBERON:0002780!6.01e-24!41;UBERON:0001890!6.01e-24!41;UBERON:0006240!6.01e-24!41;UBERON:0001893!6.66e-24!34;UBERON:0001869!2.72e-23!32;UBERON:0002020!4.65e-23!34;UBERON:0003528!4.65e-23!34;UBERON:0002791!4.80e-23!33;UBERON:0002616!3.22e-21!59;UBERON:0003075!8.24e-21!86;UBERON:0007284!8.24e-21!86;UBERON:0002346!1.08e-18!90;UBERON:0003056!2.15e-18!61;UBERON:0002619!2.24e-18!22;UBERON:0000956!6.41e-18!25;UBERON:0000203!6.41e-18!25;UBERON:0001950!3.04e-17!20;UBERON:0000153!4.73e-15!129;UBERON:0007811!4.73e-15!129;UBERON:0000033!1.56e-14!123;UBERON:0004121!2.36e-14!169;UBERON:0000924!2.85e-13!173;UBERON:0006601!2.85e-13!173;UBERON:0002420!1.94e-07!9;UBERON:0007245!1.94e-07!9;UBERON:0010009!1.94e-07!9;UBERON:0010011!1.94e-07!9;UBERON:0000454!1.94e-07!9;UBERON:0001871!7.08e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!6.82e-32!115;UBERON:0001017!6.94e-30!82;UBERON:0005743!4.32e-29!86;UBERON:0000073!1.20e-27!94;UBERON:0001016!1.20e-27!94;UBERON:0001049!3.70e-26!57;UBERON:0005068!3.70e-26!57;UBERON:0006241!3.70e-26!57;UBERON:0007135!3.70e-26!57;UBERON:0000955!3.20e-24!69;UBERON:0006238!3.20e-24!69;UBERON:0003080!3.35e-24!42;UBERON:0002780!6.01e-24!41;UBERON:0001890!6.01e-24!41;UBERON:0006240!6.01e-24!41;UBERON:0001893!6.66e-24!34;UBERON:0001869!2.72e-23!32;UBERON:0002020!4.65e-23!34;UBERON:0003528!4.65e-23!34;UBERON:0002791!4.80e-23!33;UBERON:0002616!3.22e-21!59;UBERON:0003075!8.24e-21!86;UBERON:0007284!8.24e-21!86;UBERON:0002346!1.08e-18!90;UBERON:0003056!2.15e-18!61;UBERON:0002619!2.24e-18!22;UBERON:0000956!6.41e-18!25;UBERON:0000203!6.41e-18!25;UBERON:0001950!3.04e-17!20;UBERON:0000153!4.73e-15!129;UBERON:0007811!4.73e-15!129;UBERON:0000033!1.56e-14!123;UBERON:0004121!2.36e-14!169;UBERON:0000924!2.85e-13!173;UBERON:0006601!2.85e-13!173;UBERON:0002420!1.94e-07!9;UBERON:0007245!1.94e-07!9;UBERON:0010009!1.94e-07!9;UBERON:0010011!1.94e-07!9;UBERON:0000454!1.94e-07!9;UBERON:0001871!7.08e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.06e-29;32!UBERON:0002619;2.49e-28;22!UBERON:0001893;1.66e-27;34!UBERON:0002791;4.87e-27;32!UBERON:0001950;1.63e-26;20!UBERON:0003528;1.16e-25;34!UBERON:0002020;1.16e-25;34!UBERON:0000956;4.92e-24;25!UBERON:0000203;4.92e-24;25!UBERON:0002780;3.60e-22;41!UBERON:0001890;3.60e-22;41!UBERON:0000073;1.26e-16;53!UBERON:0002616;1.26e-16;53!UBERON:0001017;2.05e-13;75!UBERON:0000955;5.63e-13;68!UBERON:0001016;3.72e-12;83!UBERON:0000200;2.70e-09;6!UBERON:0002420;3.16e-09;9!UBERON:0007245;3.16e-09;9!UBERON:0010009;3.16e-09;9!UBERON:0010011;3.16e-09;9!UBERON:0000454;3.16e-09;9!UBERON:0007023;1.01e-08;114!UBERON:0001871;1.05e-08;6!UBERON:0002021;4.29e-08;5!UBERON:0001872;7.16e-08;5!UBERON:0009663;2.61e-07;7!UBERON:0000125;5.45e-07;9!UBERON:0002308;5.45e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.56e-32,32;UBERON:0001893,6.79e-32,34;UBERON:0001017,3.60e-31,81;UBERON:0002780,1.05e-30,41;UBERON:0001890,1.05e-30,41;UBERON:0003080,1.05e-30,41;UBERON:0006240,1.05e-30,41;UBERON:0000073,2.38e-30,53;UBERON:0002616,2.38e-30,53;UBERON:0002791,6.83e-30,32;UBERON:0001049,1.60e-29,56;UBERON:0005068,1.60e-29,56;UBERON:0006241,1.60e-29,56;UBERON:0007135,1.60e-29,56;UBERON:0003528,1.66e-29,34;UBERON:0002020,1.66e-29,34;UBERON:0002619,2.27e-28,22;UBERON:0001016,9.04e-28,89;UBERON:0000955,1.84e-27,68;UBERON:0006238,1.84e-27,68;UBERON:0007023,1.96e-27,114;UBERON:0001950,1.47e-26,20;UBERON:0000956,4.55e-24,25;UBERON:0000203,4.55e-24,25;UBERON:0003056,3.13e-21,61;UBERON:0003075,1.59e-19,82;UBERON:0007284,1.59e-19,82;UBERON:0002346,6.13e-18,86;UBERON:0010314,2.27e-14,132;UBERON:0010371,5.30e-14,104;UBERON:0004121,3.57e-13,171;UBERON:0000924,3.57e-13,171;UBERON:0006601,3.57e-13,171;UBERON:0011216,7.98e-11,223;UBERON:0000200,2.69e-09,6;UBERON:0002420,3.17e-09,9;UBERON:0007245,3.17e-09,9;UBERON:0010009,3.17e-09,9;UBERON:0010011,3.17e-09,9;UBERON:0000454,3.17e-09,9;UBERON:0001871,9.09e-09,6;UBERON:0002021,4.44e-08,5;UBERON:0001872,7.06e-08,5;UBERON:0009663,2.85e-07,7;UBERON:0000125,5.45e-07,9;UBERON:0002308,5.45e-07,9 | |||
|phase1_expression=2.18014055124668,0.642301571672949,3.94672331468719,2.00146596706261,0.446961094427288,5.23403114460221,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0.572471974262113,0.136874425072884,0.125542639594803,0,0,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0,1.10799081706375,0.601633342410425,0.434021741431704,0,0,0,0,0.377875943688809,0.242584061187816,0.232429036905685,0,0.309706370895104,0,0.512321413058201,0,0,0,0,0,0,0,0.306083892370903,0.320929027076094,0.639337125799041,0.329851300186716,0.398927315243264,0,0,0,0,0,0.521482918420201,0,0.605399502633369,0,0,0,0.212604299965044,0,0.22465726229299,0.150176892841506,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0.12786256184353,5.06014813338393,0,3.47631645505977,0.795285947051099,1.94653948121054,0.661743720148475,1.55210578223795,1.31752178539689,5.6975897841505,0,0,0,0.174129737299267,0.132957960518865,0.476981248610684,0,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,55.6608585898757,0,1.05927344650575,0,0.354668382198357,7.8494864019923,0,0,0.622422070799533,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309977343527296,0,0,0,0,0.505008341862199,0.125118519871964,0,0,0.30648779579902,0,0,0,0.427114777637135,0,0,0,0.772921620136887,0.37223371266318,0,0,0,0,3.23292113637624,0,0,0,0,0,0,0.121973706129595,0.397589304964456,2.32387885739037,1.14027160516907,2.01856680700503,0.72995471815166,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.514703430895577,0,0,0,0.185176890317059,0,0,0,0,1.17408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0.207328115540772,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74306691720059,0.199945982364114,0,0,0,0,0,0,3.18518874668674,0,0,0,0,0,0,0.254094624222463,11.712586847186,1.54657762555539,3.35032530668698,7.01732626818479,5.99205619157746,2.99161459204025,1.65766205374414,0.24538298343828,0,0,1.45579603071565,5.53129865271201,4.57337003598411,12.7684142342057,0.300946099727719,0,2.0694614258501,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,7.19512642674453,4.75732117192994,2.80660094433074,11.0199668359903,2.55853624533352,9.32952742632923,7.42090332224955,0,0.532685175939381,0.164254312027618,0,0.232420756919918,0.120859449591622,0,0,0,0,0,0,0.308061348417659,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.438519753291869,0,0.256450125116389,0,0,0.515205058238611,0.824125183365091,2.14524699793529,0,0,8.03419649220798,0,0,0,0,0,0,0.0852266274161009,1.60257664164127,0,0,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.409499734223957,0,0,0,0.66343897524122,0.876901770507525,0,0,0,0,0,0,0,0,0,8.44430541190656,12.5132059324763,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0.822724546172388,0,1.08006287447623,0,0.213648142254946,18.2871172500038,0,0,0.144269212976445,0,1.27541018183058,0.798317485731266,0,0,4.22008522356922,1.68478306868075,2.73881614839831,0,2.50634477090067,1.52362600021443,3.69352572738509,11.9061827242718,1.27753871307098,2.06103206853459,0.307240764308458,0.223676107892416,1.16794399198336,2.73543333562856,0,0,0,0,0,0,1.17206543417515,0,0,0.284136146806413,0,0,0,4.97073823883149,4.64209074154692,0.111308705022906,0,0,2.39097585901284,0.276283915531148,0,0.102268682502155,17.2318727645497,36.7026713440933,0,0,0,6.90503839458535,0,0,17.4479894297139,28.1087337430409,11.9768278800717,0.260427761085233,0,0.724999575434793,0.682760689712998,0,0,0,2.33283690706603,0,27.457982960229,17.9688693551858,4.5774520895125,4.86548743697388,10.9352619012813,20.1834565381655,0,0,0.846452843541768,0,0,0,0,0,0.0915975934018623,0,0,2.66866435871542,0,0,0,0,0,0,0.843992258112108,0,0.141353071433941,5.84249327303646,0.995261931078505,0.530745387020035,0.611030144933625,0,0,0,1.68502832451693,4.01288823649394,18.5068912123018,0.182454789215666,0,0,1.18375320854817,1.20990716048664,3.97894590119637,5.37085926842148,2.40517471063188,0.414752765588989,0,0.330991955875499,0.313932918407225,0,0,0,0,0,0,2.62090002363045,0,0,0,0,1.45483524732629,11.7380648499695,4.51961481561065,0,0,33.3647894687481,0.195551382734803,0,0.426905989478705,0,0,0.343609788497747,0,0,0,0,0.951329442515298,0.523014231561666,0.101998217636322,0,16.2113477951643,3.01191833562385,1.27746588066972,0,0,0.837847203816763,0.229160424011684,0,0,0,0,1.07493555978762,1.08089965062721,0,0,0,0,0,0.508039992394707,2.38568906942791,7.89979755447138,0.643012593860077,1.78801267576404,0.415440338029185,0,0,24.725069559816,0.335434687599266,0.709251365692784,3.35709364063988,0,0,0,1.42939065274673,1.32418394073086,0,0,0,0,0,0,0,0,0,0,2.58565912723101,0.26446520348538,0.171086837884329,0,1.81538601365081,0.78602152549833,4.55662960881915,0,0,0,0,0,0,0,0.327872630709804,0,13.2910226995048,24.8933580400005,24.4122314877675,1.14681839138014,0.998361463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| ||
|short_description=p1@CACNB4 | |short_description=p1@CACNB4 | ||
}} | }} |
Latest revision as of 14:03, 17 September 2015
Short description: | p1@CACNB4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CACNB4_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000427385, NM_001005746, uc002txz.2_5end |
EntrezGene: | CACNB4 |
HGNC: | 1404 |
UniProt: | B4DG40 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data