FFCP PHASE1:Hg19::chr3:69171632..69171672,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56203 | |EntrezGene=56203 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6649 | |HGNC=6649 | ||
|TSSclassifier=strong | |||
|UniProt=Q0VAK6 | |UniProt=Q0VAK6 | ||
|association_with_transcript=44bp_to_ENST00000420581_5end | |association_with_transcript=44bp_to_ENST00000420581_5end | ||
|cluster_id=chr3:69171632..69171672,- | |||
|coexpression_cluster_id=C31 | |coexpression_cluster_id=C31 | ||
|description=CAGE_peak_3_at_LMOD3_5end | |description=CAGE_peak_3_at_LMOD3_5end | ||
|id=chr3:69171632..69171672,- | |id=chr3:69171632..69171672,- | ||
|ontology_enrichment_celltype=CL:0000188!7.25e-17!9;CL:0000594!8.21e-08!3 | |ontology_enrichment_celltype=CL:0000188!7.25e-17!9;CL:0000594!8.21e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000188;3.78e-22;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,4.15e-22,9 | |||
|ontology_enrichment_development_v019=UBERON:0004140;2.84e-07;1!UBERON:0004874;3.50e-07;1!UBERON:0010227;4.06e-07;1!UBERON:0000358;5.29e-07;1!UBERON:0010226;5.29e-07;1!UBERON:0009143;8.42e-07;1!UBERON:0008801;8.42e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.41e-28!115;UBERON:0003296!1.28e-10!4;UBERON:0010133!1.28e-10!4;UBERON:0001894!1.11e-08!7;UBERON:0006222!1.11e-08!7;UBERON:0002780!2.27e-07!41;UBERON:0001890!2.27e-07!41;UBERON:0006240!2.27e-07!41;UBERON:0003080!3.96e-07!42;UBERON:0000481!5.24e-07!347 | |ontology_enrichment_uberon=UBERON:0007023!2.41e-28!115;UBERON:0003296!1.28e-10!4;UBERON:0010133!1.28e-10!4;UBERON:0001894!1.11e-08!7;UBERON:0006222!1.11e-08!7;UBERON:0002780!2.27e-07!41;UBERON:0001890!2.27e-07!41;UBERON:0006240!2.27e-07!41;UBERON:0003080!3.96e-07!42;UBERON:0000481!5.24e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.34e-34;16!UBERON:0002036;1.34e-34;16!UBERON:0002385;1.28e-16;31!UBERON:0001015;1.28e-16;31!UBERON:0000383;1.28e-16;31!UBERON:0005090;3.81e-13;2!UBERON:0001630;3.81e-13;2!UBERON:0000341;4.69e-13;2!UBERON:0001905;9.54e-13;2!UBERON:0002757;9.54e-13;2!UBERON:0010134;9.54e-13;2!UBERON:0005408;9.54e-13;2!UBERON:0001899;9.54e-13;2!UBERON:0007100;2.00e-10;25!UBERON:0001723;3.27e-09;3!UBERON:0001033;3.27e-09;3!UBERON:0003978;1.12e-08;3!UBERON:0000946;1.12e-08;3!UBERON:0004151;1.36e-08;3!UBERON:0001389;1.98e-07;1!UBERON:0000026;1.98e-07;1!UBERON:0008784;1.98e-07;1!UBERON:0006058;1.98e-07;1!UBERON:0003663;1.98e-07;1!UBERON:0004256;1.98e-07;1!UBERON:0004708;1.98e-07;1!UBERON:0002101;1.98e-07;1!UBERON:0004709;1.98e-07;1!UBERON:0002529;1.98e-07;1!UBERON:0010538;1.98e-07;1!UBERON:0003661;1.98e-07;1!UBERON:0010890;1.98e-07;1!UBERON:0002471;1.98e-07;1!UBERON:0001383;1.98e-07;1!UBERON:0010758;1.98e-07;1!UBERON:0010707;1.98e-07;1!UBERON:0000978;1.98e-07;1!UBERON:0002103;1.98e-07;1!UBERON:0001665;1.98e-07;1!UBERON:0003823;1.98e-07;1!UBERON:0000154;1.98e-07;1!UBERON:0010709;1.98e-07;1!UBERON:0002426;2.16e-07;1!UBERON:0003831;2.16e-07;1!UBERON:0003898;2.16e-07;1!UBERON:0004830;2.16e-07;1!UBERON:0003830;2.16e-07;1!UBERON:0005175;2.16e-07;1!UBERON:0001774;2.16e-07;1!UBERON:0001103;2.16e-07;1!UBERON:0002146;3.01e-07;1!UBERON:0005623;3.01e-07;1!UBERON:0007029;3.50e-07;1!UBERON:0000989;3.50e-07;1!UBERON:0008811;3.50e-07;1!UBERON:0002079;4.06e-07;1!UBERON:0002084;5.29e-07;1!UBERON:0002135;5.29e-07;1!UBERON:0001301;5.29e-07;1!UBERON:0002082;5.29e-07;1!UBERON:0001831;8.42e-07;1!UBERON:0001567;8.42e-07;1!UBERON:0003296;8.69e-07;4!UBERON:0010133;8.69e-07;4!UBERON:0002784;8.69e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005090,3.93e-13,2;UBERON:0001630,3.93e-13,2;UBERON:0000341,4.42e-13,2;UBERON:0001905,9.00e-13,2;UBERON:0002757,9.00e-13,2;UBERON:0010134,9.00e-13,2;UBERON:0005408,9.00e-13,2;UBERON:0001899,9.00e-13,2;UBERON:0007023,1.32e-09,114;UBERON:0007100,1.37e-09,27;UBERON:0001723,3.27e-09,3;UBERON:0001033,3.27e-09,3;UBERON:0010056,3.27e-09,3;UBERON:0003978,1.24e-08,3;UBERON:0009751,1.24e-08,3;UBERON:0000946,1.24e-08,3;UBERON:0002523,1.24e-08,3;UBERON:0005983,1.24e-08,3;UBERON:0002165,1.24e-08,3;UBERON:0002062,1.24e-08,3;UBERON:0007280,1.24e-08,3;UBERON:0004151,1.29e-08,3;UBERON:0003103,3.05e-08,68;UBERON:0001134,1.35e-07,62;UBERON:0002036,1.35e-07,62;UBERON:0003082,1.35e-07,62;UBERON:0005418,1.98e-07,1;UBERON:0001389,1.98e-07,1;UBERON:0000026,1.98e-07,1;UBERON:0008784,1.98e-07,1;UBERON:0006058,1.98e-07,1;UBERON:0003663,1.98e-07,1;UBERON:0004256,1.98e-07,1;UBERON:0004708,1.98e-07,1;UBERON:0002101,1.98e-07,1;UBERON:0004709,1.98e-07,1;UBERON:0002529,1.98e-07,1;UBERON:0010538,1.98e-07,1;UBERON:0003661,1.98e-07,1;UBERON:0010890,1.98e-07,1;UBERON:0002471,1.98e-07,1;UBERON:0001383,1.98e-07,1;UBERON:0004357,1.98e-07,1;UBERON:0004347,1.98e-07,1;UBERON:0005420,1.98e-07,1;UBERON:0005732,1.98e-07,1;UBERON:0010758,1.98e-07,1;UBERON:0010707,1.98e-07,1;UBERON:0000978,1.98e-07,1;UBERON:0002103,1.98e-07,1;UBERON:0001665,1.98e-07,1;UBERON:0003823,1.98e-07,1;UBERON:0000154,1.98e-07,1;UBERON:0010709,1.98e-07,1;UBERON:0005733,1.98e-07,1;UBERON:0005730,1.98e-07,1;UBERON:0002426,2.23e-07,1;UBERON:0003831,2.23e-07,1;UBERON:0003898,2.23e-07,1;UBERON:0004830,2.23e-07,1;UBERON:0003830,2.23e-07,1;UBERON:0005175,2.23e-07,1;UBERON:0001774,2.23e-07,1;UBERON:0001103,2.23e-07,1;UBERON:0010084,2.23e-07,1;UBERON:0002385,2.64e-07,64;UBERON:0001015,2.64e-07,64;UBERON:0000383,2.64e-07,64;UBERON:0002146,3.01e-07,1;UBERON:0005623,3.01e-07,1;UBERON:0007029,3.40e-07,1;UBERON:0000989,3.60e-07,1;UBERON:0008811,3.60e-07,1;UBERON:0006258,3.60e-07,1;UBERON:0005876,3.60e-07,1;UBERON:0004874,3.60e-07,1;UBERON:0002079,4.06e-07,1;UBERON:0002084,4.85e-07,1;UBERON:0002082,4.85e-07,1;UBERON:0010226,4.85e-07,1;UBERON:0001301,5.14e-07,1;UBERON:0002135,6.12e-07,1;UBERON:0003296,8.45e-07,4;UBERON:0010133,8.45e-07,4;UBERON:0002784,8.45e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74514739048685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19013370364003,1.07834031980251,1.5350367472613,1.7918754422989,0.107420244868274,0.870100163485371,2.38634556765083,19.7651119135757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0.0897576444097721,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.0515529459758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62090002363045,0,0,0.0730893170861856,0,1.16386819786103,0,1.80784592624426,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23425921017803,6.41649187232714,0,0.399358000997982,1.71690419254628,5.57928643604681,7.72609933597352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,3.57347663186684,2.64836788146173,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0.628817220398664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20008329398946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.41023272848151,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0.206686796501184,0,0,1.09651553371436,4.46590060550365,0,0,8.0355275381743,3.69912094440706,0.606965604236632,0.682986574053893,0,0,0,0.0679697329768317,0,0,0,0.156986185701028,0,0,0,0,0,0,0,1.27865567904938,9.38834670433929,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0.294450700845729,0,17.4805786040732,39.0118666053739,19.7168453327494,4.85710993059139,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0,0,0.0939839179798536,0,0,0,0.352894871715692,0,0,0.917458566809082,0,0,0,0,0,0.371995018166751,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0.103432995861895,16.8454845701775,9.9987061214771,0,0,0,0.318235791390825,0.606351566874658,22.642541781284,40.0412962269779,0.673520530145875,0.286888821570705,1.99596213927608,0,0,0,0,2.34640942403454,0,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74514739048685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19013370364003,1.07834031980251,1.5350367472613,1.7918754422989,0.107420244868274,0.870100163485371,2.38634556765083,19.7651119135757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0.0897576444097721,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.0515529459758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62090002363045,0,0,0.0730893170861856,0,1.16386819786103,0,1.80784592624426,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23425921017803,6.41649187232714,0,0.399358000997982,1.71690419254628,5.57928643604681,7.72609933597352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,3.57347663186684,2.64836788146173,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0.628817220398664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20008329398946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.41023272848151,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0.206686796501184,0,0,1.09651553371436,4.46590060550365,0,0,8.0355275381743,3.69912094440706,0.606965604236632,0.682986574053893,0,0,0,0.0679697329768317,0,0,0,0.156986185701028,0,0,0,0,0,0,0,1.27865567904938,9.38834670433929,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0.294450700845729,0,17.4805786040732,39.0118666053739,19.7168453327494,4.85710993059139,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0,0,0.0939839179798536,0,0,0,0.352894871715692,0,0,0.917458566809082,0,0,0,0,0,0.371995018166751,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0.103432995861895,16.8454845701775,9.9987061214771,0,0,0,0.318235791390825,0.606351566874658,22.642541781284,40.0412962269779,0.673520530145875,0.286888821570705,1.99596213927608,0,0,0,0,2.34640942403454,0,0,0,0.402547587182052,0 | ||
|short_description=p3@LMOD3 | |short_description=p3@LMOD3 | ||
}} | }} |
Latest revision as of 11:32, 19 September 2015
Short description: | p3@LMOD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LMOD3_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | 44bp_to_ENST00000420581_5end |
EntrezGene: | LMOD3 |
HGNC: | 6649 |
UniProt: | Q0VAK6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 4.15e-22 | 9 |