FFCP PHASE1:Hg19::chr19:37960240..37960299,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:37960240..37960299,+
|short_description=p1@ZNF570
|description=CAGE_peak_1_at_ZNF570_5end
|association_with_transcript=0bp_to_ENST00000388801_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=148268 | |EntrezGene=148268 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26416 | |HGNC=26416 | ||
|TSSclassifier=strong | |||
|UniProt=B4DMP1 | |UniProt=B4DMP1 | ||
|association_with_transcript=0bp_to_ENST00000388801_5end | |||
|cluster_id=chr19:37960240..37960299,+ | |||
|description=CAGE_peak_1_at_ZNF570_5end | |||
|id=chr19:37960240..37960299,+ | |||
|ontology_enrichment_celltype=CL:0000791!5.83e-11!18;CL:0000789!5.83e-11!18;CL:0002420!5.83e-11!18;CL:0002419!5.83e-11!18;CL:0000790!5.83e-11!18;CL:0000838!4.82e-09!52;CL:0000542!7.05e-09!53;CL:0000051!7.05e-09!53;CL:0000084!1.11e-08!25;CL:0000827!1.11e-08!25;CL:0000625!5.46e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.21e-11;18!CL:0000789;3.21e-11;18!CL:0002419;3.21e-11;18!CL:0000084;2.55e-09;25!CL:0000625;3.74e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.53e-11,18;CL:0000789,4.53e-11,18;CL:0002420,4.53e-11,18;CL:0002419,4.53e-11,18;CL:0000790,4.53e-11,18;CL:0000838,3.36e-09,52;CL:0000542,4.95e-09,53;CL:0000051,4.95e-09,53;CL:0000084,5.46e-09,25;CL:0000827,5.46e-09,25;CL:0000625,4.59e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000790;3.21e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.04e-19!115;UBERON:0001049!3.83e-13!57;UBERON:0005068!3.83e-13!57;UBERON:0006241!3.83e-13!57;UBERON:0007135!3.83e-13!57;UBERON:0001017!3.87e-13!82;UBERON:0005743!4.21e-13!86;UBERON:0000073!2.91e-12!94;UBERON:0001016!2.91e-12!94;UBERON:0002780!6.88e-12!41;UBERON:0001890!6.88e-12!41;UBERON:0006240!6.88e-12!41;UBERON:0003080!1.36e-11!42;UBERON:0002616!1.95e-11!59;UBERON:0000955!7.16e-10!69;UBERON:0006238!7.16e-10!69;UBERON:0003075!9.53e-10!86;UBERON:0007284!9.53e-10!86;UBERON:0002346!1.13e-09!90;UBERON:0002020!1.93e-09!34;UBERON:0003528!1.93e-09!34;UBERON:0001893!1.94e-09!34;UBERON:0002791!4.01e-09!33;UBERON:0001869!9.23e-09!32;UBERON:0000924!1.11e-08!173;UBERON:0006601!1.11e-08!173;UBERON:0004121!1.26e-08!169;UBERON:0000153!2.53e-08!129;UBERON:0007811!2.53e-08!129;UBERON:0000033!3.27e-07!123;UBERON:0003056!4.10e-07!61;UBERON:0000956!7.94e-07!25;UBERON:0000203!7.94e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;7.95e-09;41!UBERON:0001890;7.95e-09;41!UBERON:0000073;1.67e-08;53!UBERON:0002616;1.67e-08;53!UBERON:0002791;6.34e-08;32!UBERON:0003528;6.94e-08;34!UBERON:0002020;6.94e-08;34!UBERON:0001893;7.85e-08;34!UBERON:0001869;1.15e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.50e-18,114;UBERON:0001017,1.01e-13,81;UBERON:0001049,1.46e-13,56;UBERON:0005068,1.46e-13,56;UBERON:0006241,1.46e-13,56;UBERON:0007135,1.46e-13,56;UBERON:0000073,5.98e-13,53;UBERON:0002616,5.98e-13,53;UBERON:0001016,1.33e-12,89;UBERON:0002780,5.20e-12,41;UBERON:0001890,5.20e-12,41;UBERON:0003080,5.20e-12,41;UBERON:0006240,5.20e-12,41;UBERON:0000955,2.25e-10,68;UBERON:0006238,2.25e-10,68;UBERON:0003075,1.07e-09,82;UBERON:0007284,1.07e-09,82;UBERON:0002346,1.30e-09,86;UBERON:0003528,1.56e-09,34;UBERON:0002020,1.56e-09,34;UBERON:0001893,1.57e-09,34;UBERON:0002791,5.37e-09,32;UBERON:0001869,7.59e-09,32;UBERON:0004121,1.31e-08,171;UBERON:0000924,1.31e-08,171;UBERON:0006601,1.31e-08,171;UBERON:0003056,2.51e-07,61;UBERON:0010314,2.52e-07,132;UBERON:0010371,4.07e-07,104;UBERON:0000956,6.88e-07,25;UBERON:0000203,6.88e-07,25 | |||
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| ||
|short_description=p1@ZNF570 | |||
}} | }} |
Latest revision as of 18:05, 17 September 2015
Short description: | p1@ZNF570 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF570_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000388801_5end |
EntrezGene: | ZNF570 |
HGNC: | 26416 |
UniProt: | B4DMP1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.53e-11 | 18 |
alpha-beta T cell | 4.53e-11 | 18 |
immature T cell | 4.53e-11 | 18 |
mature T cell | 4.53e-11 | 18 |
immature alpha-beta T cell | 4.53e-11 | 18 |
lymphoid lineage restricted progenitor cell | 3.36e-09 | 52 |
lymphocyte | 4.95e-09 | 53 |
common lymphoid progenitor | 4.95e-09 | 53 |
T cell | 5.46e-09 | 25 |
pro-T cell | 5.46e-09 | 25 |
CD8-positive, alpha-beta T cell | 4.59e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.50e-18 | 114 |
central nervous system | 1.01e-13 | 81 |
neural tube | 1.46e-13 | 56 |
neural rod | 1.46e-13 | 56 |
future spinal cord | 1.46e-13 | 56 |
neural keel | 1.46e-13 | 56 |
regional part of nervous system | 5.98e-13 | 53 |
regional part of brain | 5.98e-13 | 53 |
nervous system | 1.33e-12 | 89 |
regional part of forebrain | 5.20e-12 | 41 |
forebrain | 5.20e-12 | 41 |
anterior neural tube | 5.20e-12 | 41 |
future forebrain | 5.20e-12 | 41 |
brain | 2.25e-10 | 68 |
future brain | 2.25e-10 | 68 |
neural plate | 1.07e-09 | 82 |
presumptive neural plate | 1.07e-09 | 82 |
neurectoderm | 1.30e-09 | 86 |
brain grey matter | 1.56e-09 | 34 |
gray matter | 1.56e-09 | 34 |
telencephalon | 1.57e-09 | 34 |
regional part of telencephalon | 5.37e-09 | 32 |
cerebral hemisphere | 7.59e-09 | 32 |
ectoderm-derived structure | 1.31e-08 | 171 |
ectoderm | 1.31e-08 | 171 |
presumptive ectoderm | 1.31e-08 | 171 |
pre-chordal neural plate | 2.51e-07 | 61 |
structure with developmental contribution from neural crest | 2.52e-07 | 132 |
ecto-epithelium | 4.07e-07 | 104 |
cerebral cortex | 6.88e-07 | 25 |
pallium | 6.88e-07 | 25 |