FFCP PHASE1:Hg19::chr7:131241361..131241398,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5420 | |EntrezGene=5420 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9171 | |HGNC=9171 | ||
|TSSclassifier=strong | |||
|UniProt=O00592,F5H7A2,F5GWY5,F5H3W1,Q96N83 | |UniProt=O00592,F5H7A2,F5GWY5,F5H3W1,Q96N83 | ||
|association_with_transcript=0bp_to_ENST00000322985,ENST00000378555,ENST00000537928,ENST00000541194,ENST00000544955,NM_001018111,NM_005397,uc003vqw.3,uc003vqx.3_5end | |association_with_transcript=0bp_to_ENST00000322985,ENST00000378555,ENST00000537928,ENST00000541194,ENST00000544955,NM_001018111,NM_005397,uc003vqw.3,uc003vqx.3_5end | ||
|cluster_id=chr7:131241361..131241398,- | |||
|coexpression_cluster_id=C1090 | |coexpression_cluster_id=C1090 | ||
|description=CAGE_peak_1_at_PODXL_5end | |description=CAGE_peak_1_at_PODXL_5end | ||
|id=chr7:131241361..131241398,- | |id=chr7:131241361..131241398,- | ||
|ontology_enrichment_celltype=CL:0002139!1.39e-12!24;CL:0000213!9.68e-12!57;CL:0000215!9.68e-12!57;CL:0000115!2.22e-10!35;CL:0002078!4.81e-10!44;CL:0000071!9.03e-10!18;CL:0002546!9.03e-10!18 | |ontology_enrichment_celltype=CL:0002139!1.39e-12!24;CL:0000213!9.68e-12!57;CL:0000215!9.68e-12!57;CL:0000115!2.22e-10!35;CL:0002078!4.81e-10!44;CL:0000071!9.03e-10!18;CL:0002546!9.03e-10!18 | ||
|ontology_enrichment_celltype_v019=CL:0002139;8.60e-13;24!CL:0000071;6.36e-10;18!CL:0000115;2.12e-09;36!CL:0000213;2.00e-07;58!CL:0000215;2.00e-07;58!CL:0002078;5.00e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,8.61e-13,24;CL:0000213,3.99e-12,58;CL:0000215,3.99e-12,58;CL:0000115,8.17e-11,36;CL:0002078,2.16e-10,45;CL:0000071,6.32e-10,18;CL:0002546,6.32e-10,18 | |||
|ontology_enrichment_development_v019=CL:0002546;6.36e-10;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.29e-20!115;UBERON:0000025!3.24e-19!194;UBERON:0004111!3.45e-18!241;UBERON:0005743!9.80e-18!86;UBERON:0000468!1.27e-17!659;UBERON:0001017!2.28e-17!82;UBERON:0000073!2.28e-17!94;UBERON:0001016!2.28e-17!94;UBERON:0000477!1.07e-16!286;UBERON:0001049!4.08e-16!57;UBERON:0005068!4.08e-16!57;UBERON:0006241!4.08e-16!57;UBERON:0007135!4.08e-16!57;UBERON:0000480!5.29e-16!626;UBERON:0000467!7.08e-16!625;UBERON:0000955!2.90e-14!69;UBERON:0006238!2.90e-14!69;UBERON:0003075!9.64e-14!86;UBERON:0007284!9.64e-14!86;UBERON:0002616!2.20e-13!59;UBERON:0003080!6.01e-13!42;UBERON:0002780!1.09e-12!41;UBERON:0001890!1.09e-12!41;UBERON:0006240!1.09e-12!41;UBERON:0002346!2.15e-12!90;UBERON:0000119!3.51e-12!312;UBERON:0000483!5.87e-12!309;UBERON:0002020!2.05e-11!34;UBERON:0003528!2.05e-11!34;UBERON:0001893!4.89e-11!34;UBERON:0002791!8.84e-11!33;UBERON:0001869!1.22e-10!32;UBERON:0000064!7.20e-10!219;UBERON:0001986!9.03e-10!18;UBERON:0004638!9.03e-10!18;UBERON:0004852!9.03e-10!18;UBERON:0000055!3.24e-09!69;UBERON:0000922!1.16e-08!612;UBERON:0003056!1.18e-08!61;UBERON:0000956!2.58e-08!25;UBERON:0000203!2.58e-08!25;UBERON:0000062!4.07e-08!511;UBERON:0000475!4.91e-08!365;UBERON:0004121!7.97e-08!169;UBERON:0001981!2.18e-07!60;UBERON:0007500!2.18e-07!60;UBERON:0004537!2.18e-07!60;UBERON:0006965!2.18e-07!60;UBERON:0004872!2.48e-07!84;UBERON:0002049!2.71e-07!79;UBERON:0007798!2.71e-07!79;UBERON:0002619!2.88e-07!22;UBERON:0000924!3.15e-07!173;UBERON:0006601!3.15e-07!173;UBERON:0000487!3.35e-07!22;UBERON:0003914!5.95e-07!118 | |ontology_enrichment_uberon=UBERON:0007023!9.29e-20!115;UBERON:0000025!3.24e-19!194;UBERON:0004111!3.45e-18!241;UBERON:0005743!9.80e-18!86;UBERON:0000468!1.27e-17!659;UBERON:0001017!2.28e-17!82;UBERON:0000073!2.28e-17!94;UBERON:0001016!2.28e-17!94;UBERON:0000477!1.07e-16!286;UBERON:0001049!4.08e-16!57;UBERON:0005068!4.08e-16!57;UBERON:0006241!4.08e-16!57;UBERON:0007135!4.08e-16!57;UBERON:0000480!5.29e-16!626;UBERON:0000467!7.08e-16!625;UBERON:0000955!2.90e-14!69;UBERON:0006238!2.90e-14!69;UBERON:0003075!9.64e-14!86;UBERON:0007284!9.64e-14!86;UBERON:0002616!2.20e-13!59;UBERON:0003080!6.01e-13!42;UBERON:0002780!1.09e-12!41;UBERON:0001890!1.09e-12!41;UBERON:0006240!1.09e-12!41;UBERON:0002346!2.15e-12!90;UBERON:0000119!3.51e-12!312;UBERON:0000483!5.87e-12!309;UBERON:0002020!2.05e-11!34;UBERON:0003528!2.05e-11!34;UBERON:0001893!4.89e-11!34;UBERON:0002791!8.84e-11!33;UBERON:0001869!1.22e-10!32;UBERON:0000064!7.20e-10!219;UBERON:0001986!9.03e-10!18;UBERON:0004638!9.03e-10!18;UBERON:0004852!9.03e-10!18;UBERON:0000055!3.24e-09!69;UBERON:0000922!1.16e-08!612;UBERON:0003056!1.18e-08!61;UBERON:0000956!2.58e-08!25;UBERON:0000203!2.58e-08!25;UBERON:0000062!4.07e-08!511;UBERON:0000475!4.91e-08!365;UBERON:0004121!7.97e-08!169;UBERON:0001981!2.18e-07!60;UBERON:0007500!2.18e-07!60;UBERON:0004537!2.18e-07!60;UBERON:0006965!2.18e-07!60;UBERON:0004872!2.48e-07!84;UBERON:0002049!2.71e-07!79;UBERON:0007798!2.71e-07!79;UBERON:0002619!2.88e-07!22;UBERON:0000924!3.15e-07!173;UBERON:0006601!3.15e-07!173;UBERON:0000487!3.35e-07!22;UBERON:0003914!5.95e-07!118 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;3.36e-10;34!UBERON:0002020;3.36e-10;34!UBERON:0001893;5.45e-10;34!UBERON:0001869;5.95e-10;32!UBERON:0002791;6.31e-10;32!UBERON:0004638;6.36e-10;18!UBERON:0001986;6.36e-10;18!UBERON:0004852;6.36e-10;18!UBERON:0002780;1.56e-09;41!UBERON:0001890;1.56e-09;41!UBERON:0000073;5.18e-09;53!UBERON:0002616;5.18e-09;53!UBERON:0000956;1.84e-08;25!UBERON:0000203;1.84e-08;25!UBERON:0000487;2.03e-07;22!UBERON:0002619;2.18e-07;22!UBERON:0001017;5.50e-07;75!UBERON:0001016;7.89e-07;83!UBERON:0001950;9.34e-07;20 | |||
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| ||
|short_description=p1@PODXL | |short_description=p1@PODXL | ||
}} | }} |
Latest revision as of 10:15, 16 September 2015
Short description: | p1@PODXL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PODXL_5end |
Coexpression cluster: | C1090_teratocarcinoma_Fibroblast_glioblastoma_kidney_H9_iPS_Amniotic |
Association with transcript: | 0bp_to_ENST00000322985, ENST00000378555, ENST00000537928, ENST00000541194, ENST00000544955, NM_001018111, NM_005397, uc003vqw.3, uc003vqx.3_5end |
EntrezGene: | PODXL |
HGNC: | 9171 |
UniProt: | O00592F5H7A2F5GWY5F5H3W1Q96N83 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 8.61e-13 | 24 |
lining cell | 3.99e-12 | 58 |
barrier cell | 3.99e-12 | 58 |
endothelial cell | 8.17e-11 | 36 |
meso-epithelial cell | 2.16e-10 | 45 |
blood vessel endothelial cell | 6.32e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.32e-10 | 18 |