FFCP PHASE1:Hg19::chr9:139543390..139543404,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:139543390..139543404,+ | |||
|coexpression_cluster_id=C140 | |coexpression_cluster_id=C140 | ||
|description=CAGE_peak_at_chr9:139543390..139543404,+ | |description=CAGE_peak_at_chr9:139543390..139543404,+ | ||
|id=chr9:139543390..139543404,+ | |id=chr9:139543390..139543404,+ | ||
|ontology_enrichment_celltype=CL:0002139!2.62e-67!24;CL:0000115!3.96e-66!35;CL:0002078!1.98e-54!44;CL:0000071!1.45e-51!18;CL:0002546!1.45e-51!18;CL:0000213!5.34e-40!57;CL:0000215!5.34e-40!57;CL:1000413!7.01e-27!9;CL:0002544!1.47e-18!6;CL:0002543!2.22e-18!6;CL:0005020!4.34e-17!6;CL:0002138!4.34e-17!6;CL:0005022!4.34e-17!6;CL:0000222!9.13e-15!119;CL:0000076!2.07e-11!62;CL:0002618!5.96e-10!3;CL:0002144!1.61e-09!3;CL:0000666!1.40e-07!4;CL:0002188!1.40e-07!4;CL:1000612!2.60e-07!7;CL:1000746!2.60e-07!7;CL:0002545!2.70e-07!2;CL:0002262!3.23e-07!2;CL:1000398!3.23e-07!2 | |ontology_enrichment_celltype=CL:0002139!2.62e-67!24;CL:0000115!3.96e-66!35;CL:0002078!1.98e-54!44;CL:0000071!1.45e-51!18;CL:0002546!1.45e-51!18;CL:0000213!5.34e-40!57;CL:0000215!5.34e-40!57;CL:1000413!7.01e-27!9;CL:0002544!1.47e-18!6;CL:0002543!2.22e-18!6;CL:0005020!4.34e-17!6;CL:0002138!4.34e-17!6;CL:0005022!4.34e-17!6;CL:0000222!9.13e-15!119;CL:0000076!2.07e-11!62;CL:0002618!5.96e-10!3;CL:0002144!1.61e-09!3;CL:0000666!1.40e-07!4;CL:0002188!1.40e-07!4;CL:1000612!2.60e-07!7;CL:1000746!2.60e-07!7;CL:0002545!2.70e-07!2;CL:0002262!3.23e-07!2;CL:1000398!3.23e-07!2 | ||
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|ontology_enrichment_celltype_v019_2=CL:0000115,2.37e-108,36;CL:0002139,5.57e-94,24;CL:0000071,4.93e-90,18;CL:0002546,4.93e-90,18;CL:0002078,8.71e-86,45;CL:0000213,1.52e-65,58;CL:0000215,1.52e-65,58;CL:1000413,8.20e-58,9;CL:0002544,3.04e-39,6;CL:0002543,7.63e-39,6;CL:0000222,5.33e-29,121;CL:0000076,1.93e-23,63;CL:0002188,2.66e-21,5;CL:0002618,4.12e-20,3;CL:1000746,2.82e-15,7;CL:1000612,2.82e-15,7;CL:0002545,3.01e-14,2;CL:0002262,4.47e-14,2;CL:1000398,4.47e-14,2;CL:0002321,1.99e-11,250;CL:0000066,2.31e-11,253;CL:0005020,5.69e-10,6;CL:0002138,5.69e-10,6;CL:0005022,5.69e-10,6;CL:0002681,5.74e-09,12;CL:0002584,5.74e-09,12;CL:1000449,3.43e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002546;1.02e-89;18!CL:0000222;4.36e-13;121!CL:0005022;5.42e-10;6 | |||
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|ontology_enrichment_disease_v019=DOID:8692;6.19e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,7.39e-07,31 | |||
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|short_description=p@chr9:139543390..139543404,+ | |short_description=p@chr9:139543390..139543404,+ | ||
}} | }} |
Latest revision as of 00:20, 1 August 2015
Short description: | p@chr9:139543390..139543404, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:139543390..139543404, + |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.37e-108 | 36 |
endothelial cell of vascular tree | 5.57e-94 | 24 |
blood vessel endothelial cell | 4.93e-90 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.93e-90 | 18 |
meso-epithelial cell | 8.71e-86 | 45 |
lining cell | 1.52e-65 | 58 |
barrier cell | 1.52e-65 | 58 |
endothelial cell of artery | 8.20e-58 | 9 |
aortic endothelial cell | 3.04e-39 | 6 |
vein endothelial cell | 7.63e-39 | 6 |
mesodermal cell | 5.33e-29 | 121 |
squamous epithelial cell | 1.93e-23 | 63 |
glomerular endothelial cell | 2.66e-21 | 5 |
endothelial cell of umbilical vein | 4.12e-20 | 3 |
glomerular cell | 2.82e-15 | 7 |
kidney corpuscule cell | 2.82e-15 | 7 |
thoracic aorta endothelial cell | 3.01e-14 | 2 |
endothelial cell of sinusoid | 4.47e-14 | 2 |
endothelial cell of hepatic sinusoid | 4.47e-14 | 2 |
embryonic cell | 1.99e-11 | 250 |
epithelial cell | 2.31e-11 | 253 |
lymphangioblast | 5.69e-10 | 6 |
endothelial cell of lymphatic vessel | 5.69e-10 | 6 |
vascular lymphangioblast | 5.69e-10 | 6 |
kidney cortical cell | 5.74e-09 | 12 |
renal cortical epithelial cell | 5.74e-09 | 12 |
epithelial cell of nephron | 3.43e-07 | 15 |
Ontology term | p-value | n |
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