FFCP PHASE1:Hg19::chr2:27616442..27616446,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2498 | |EntrezGene=2498 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=3990 | |HGNC=3990 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NR_002201,uc002rkn.1_5end | |association_with_transcript=0bp_to_NR_002201,uc002rkn.1_5end | ||
|cluster_id=chr2:27616442..27616446,- | |||
|coexpression_cluster_id=C804 | |coexpression_cluster_id=C804 | ||
|description=CAGE_peak_1_at_FTH1P3_5end | |description=CAGE_peak_1_at_FTH1P3_5end | ||
|id=chr2:27616442..27616446,- | |id=chr2:27616442..27616446,- | ||
|ontology_enrichment_celltype=CL:0002194!5.59e-18!63;CL:0000576!5.59e-18!63;CL:0000040!5.59e-18!63;CL:0000559!5.59e-18!63;CL:0002009!1.07e-16!65;CL:0000860!6.02e-16!45;CL:0002057!6.10e-16!42;CL:0000766!3.17e-15!76;CL:0000839!5.37e-15!70;CL:0002371!2.16e-14!591;CL:0000548!2.60e-14!679;CL:0000004!2.60e-14!679;CL:0000255!2.60e-14!679;CL:0000557!1.92e-13!71;CL:0000012!2.82e-13!682;CL:0000144!4.44e-13!625;CL:0000222!4.53e-12!119;CL:0000003!3.18e-10!722;CL:0000220!2.87e-09!246;CL:0000048!6.18e-09!430;CL:0000063!8.16e-09!578;CL:0002321!8.55e-09!248;CL:0000723!1.73e-08!436;CL:0000183!8.25e-08!59;CL:0000680!1.88e-07!57;CL:0000056!1.88e-07!57;CL:0000355!1.88e-07!57;CL:0000034!3.59e-07!444 | |ontology_enrichment_celltype=CL:0002194!5.59e-18!63;CL:0000576!5.59e-18!63;CL:0000040!5.59e-18!63;CL:0000559!5.59e-18!63;CL:0002009!1.07e-16!65;CL:0000860!6.02e-16!45;CL:0002057!6.10e-16!42;CL:0000766!3.17e-15!76;CL:0000839!5.37e-15!70;CL:0002371!2.16e-14!591;CL:0000548!2.60e-14!679;CL:0000004!2.60e-14!679;CL:0000255!2.60e-14!679;CL:0000557!1.92e-13!71;CL:0000012!2.82e-13!682;CL:0000144!4.44e-13!625;CL:0000222!4.53e-12!119;CL:0000003!3.18e-10!722;CL:0000220!2.87e-09!246;CL:0000048!6.18e-09!430;CL:0000063!8.16e-09!578;CL:0002321!8.55e-09!248;CL:0000723!1.73e-08!436;CL:0000183!8.25e-08!59;CL:0000680!1.88e-07!57;CL:0000056!1.88e-07!57;CL:0000355!1.88e-07!57;CL:0000034!3.59e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000473;2.04e-15;39!CL:0000234;2.04e-15;39!CL:0000860;1.36e-14;33!CL:0002057;1.36e-14;33!CL:0000576;1.48e-09;48!CL:0000766;1.89e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.57e-19,48;CL:0000234,1.57e-19,48;CL:0002194,1.65e-17,59;CL:0000576,1.65e-17,59;CL:0000040,1.65e-17,59;CL:0000559,1.65e-17,59;CL:0002009,3.37e-16,61;CL:0000860,6.10e-16,42;CL:0002057,6.10e-16,42;CL:0000766,1.12e-14,72;CL:0000839,1.84e-14,66;CL:0000557,6.72e-13,67;CL:0000222,1.12e-12,121;CL:0002321,3.08e-09,250;CL:0000048,1.06e-08,427;CL:0000723,2.94e-08,433;CL:0000680,8.47e-08,58;CL:0000056,8.47e-08,58;CL:0000355,8.47e-08,58;CL:0000187,4.70e-07,55;CL:0000034,5.82e-07,441;CL:0000192,6.00e-07,43;CL:0000514,6.00e-07,43 | |||
|ontology_enrichment_development_v019=CL:0002057;5.63e-12;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!8.92e-20!448;UBERON:0004120!8.92e-20!448;UBERON:0006603!8.92e-20!448;UBERON:0003081!1.36e-18!216;UBERON:0002204!3.94e-18!167;UBERON:0002371!2.39e-14!80;UBERON:0000468!2.60e-14!659;UBERON:0000923!7.08e-14!604;UBERON:0005291!7.08e-14!604;UBERON:0006598!7.08e-14!604;UBERON:0002532!7.08e-14!604;UBERON:0002050!1.23e-13!605;UBERON:0005423!1.23e-13!605;UBERON:0000922!1.05e-12!612;UBERON:0000467!1.63e-12!625;UBERON:0002405!3.10e-12!115;UBERON:0001474!3.13e-12!86;UBERON:0000480!3.34e-12!626;UBERON:0004765!5.51e-12!101;UBERON:0001434!5.51e-12!101;UBERON:0002193!2.31e-11!112;UBERON:0002390!2.46e-10!102;UBERON:0003061!2.46e-10!102;UBERON:0004535!4.03e-08!110;UBERON:0001009!4.35e-08!113;UBERON:0005256!2.73e-07!143;UBERON:0003914!3.36e-07!118;UBERON:0000486!7.32e-07!82 | |ontology_enrichment_uberon=UBERON:0000926!8.92e-20!448;UBERON:0004120!8.92e-20!448;UBERON:0006603!8.92e-20!448;UBERON:0003081!1.36e-18!216;UBERON:0002204!3.94e-18!167;UBERON:0002371!2.39e-14!80;UBERON:0000468!2.60e-14!659;UBERON:0000923!7.08e-14!604;UBERON:0005291!7.08e-14!604;UBERON:0006598!7.08e-14!604;UBERON:0002532!7.08e-14!604;UBERON:0002050!1.23e-13!605;UBERON:0005423!1.23e-13!605;UBERON:0000922!1.05e-12!612;UBERON:0000467!1.63e-12!625;UBERON:0002405!3.10e-12!115;UBERON:0001474!3.13e-12!86;UBERON:0000480!3.34e-12!626;UBERON:0004765!5.51e-12!101;UBERON:0001434!5.51e-12!101;UBERON:0002193!2.31e-11!112;UBERON:0002390!2.46e-10!102;UBERON:0003061!2.46e-10!102;UBERON:0004535!4.03e-08!110;UBERON:0001009!4.35e-08!113;UBERON:0005256!2.73e-07!143;UBERON:0003914!3.36e-07!118;UBERON:0000486!7.32e-07!82 | ||
|ontology_enrichment_uberon_v019= | |||
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| ||
|short_description=p1@FTH1P3 | |short_description=p1@FTH1P3 | ||
}} | }} |
Latest revision as of 17:24, 16 September 2015
Short description: | p1@FTH1P3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FTH1P3_5end |
Coexpression cluster: | C804_Smooth_mesenchymal_CD14_Mesenchymal_Cardiac_Adipocyte_Fibroblast |
Association with transcript: | 0bp_to_NR_002201, uc002rkn.1_5end |
EntrezGene: | FTH1P3 |
HGNC: | 3990 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.57e-19 | 48 |
phagocyte | 1.57e-19 | 48 |
monopoietic cell | 1.65e-17 | 59 |
monocyte | 1.65e-17 | 59 |
monoblast | 1.65e-17 | 59 |
promonocyte | 1.65e-17 | 59 |
macrophage dendritic cell progenitor | 3.37e-16 | 61 |
classical monocyte | 6.10e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.10e-16 | 42 |
myeloid leukocyte | 1.12e-14 | 72 |
myeloid lineage restricted progenitor cell | 1.84e-14 | 66 |
granulocyte monocyte progenitor cell | 6.72e-13 | 67 |
mesodermal cell | 1.12e-12 | 121 |
embryonic cell | 3.08e-09 | 250 |
multi fate stem cell | 1.06e-08 | 427 |
somatic stem cell | 2.94e-08 | 433 |
muscle precursor cell | 8.47e-08 | 58 |
myoblast | 8.47e-08 | 58 |
multi-potent skeletal muscle stem cell | 8.47e-08 | 58 |
muscle cell | 4.70e-07 | 55 |
stem cell | 5.82e-07 | 441 |
smooth muscle cell | 6.00e-07 | 43 |
smooth muscle myoblast | 6.00e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 8.49e-22 | 315 |
mesoderm-derived structure | 8.49e-22 | 315 |
presumptive mesoderm | 8.49e-22 | 315 |
musculoskeletal system | 5.73e-19 | 167 |
lateral plate mesoderm | 7.46e-17 | 203 |
bone marrow | 8.63e-14 | 76 |
germ layer | 5.89e-13 | 560 |
germ layer / neural crest | 5.89e-13 | 560 |
embryonic tissue | 5.89e-13 | 560 |
presumptive structure | 5.89e-13 | 560 |
germ layer / neural crest derived structure | 5.89e-13 | 560 |
epiblast (generic) | 5.89e-13 | 560 |
developing anatomical structure | 8.58e-13 | 581 |
embryonic structure | 1.61e-12 | 564 |
skeletal system | 1.91e-12 | 100 |
skeletal element | 1.99e-12 | 90 |
bone element | 1.13e-11 | 82 |
embryo | 3.51e-11 | 592 |
immune system | 4.23e-11 | 93 |
hemolymphoid system | 8.28e-11 | 108 |
hematopoietic system | 8.57e-10 | 98 |
blood island | 8.57e-10 | 98 |
cardiovascular system | 6.99e-08 | 109 |
circulatory system | 7.51e-08 | 112 |
epithelial vesicle | 1.25e-07 | 78 |
multilaminar epithelium | 3.69e-07 | 83 |
epithelial tube | 6.22e-07 | 117 |
mesenchyme | 6.41e-07 | 160 |
entire embryonic mesenchyme | 6.41e-07 | 160 |