FFCP PHASE1:Hg19::chr2:235860653..235860681,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23677 | |EntrezGene=23677 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10826 | |HGNC=10826 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000484097_5end | |association_with_transcript=0bp_to_ENST00000484097_5end | ||
|cluster_id=chr2:235860653..235860681,+ | |||
|description=CAGE_peak_1_at_SH3BP4_5end | |description=CAGE_peak_1_at_SH3BP4_5end | ||
|id=chr2:235860653..235860681,+ | |id=chr2:235860653..235860681,+ | ||
|ontology_enrichment_celltype=CL:0000055!9.77e-28!180;CL:0000220!8.67e-23!246;CL:0002321!1.06e-22!248;CL:0000222!1.53e-17!119;CL:0000057!1.78e-17!75;CL:0000183!7.05e-11!59;CL:0000192!2.97e-10!42;CL:0000514!2.97e-10!42;CL:0000680!5.62e-10!57;CL:0000056!5.62e-10!57;CL:0000355!5.62e-10!57;CL:0000187!1.32e-09!54;CL:0000144!1.74e-09!625;CL:0000548!7.60e-09!679;CL:0000004!7.60e-09!679;CL:0000255!7.60e-09!679;CL:0000012!1.11e-08!682;CL:0000393!1.44e-08!60;CL:0000211!1.44e-08!60;CL:0000359!4.00e-08!32;CL:0002620!4.33e-08!23;CL:0000066!7.58e-08!254;CL:0000213!4.90e-07!57;CL:0000215!4.90e-07!57;CL:1000449!6.91e-07!16 | |ontology_enrichment_celltype=CL:0000055!9.77e-28!180;CL:0000220!8.67e-23!246;CL:0002321!1.06e-22!248;CL:0000222!1.53e-17!119;CL:0000057!1.78e-17!75;CL:0000183!7.05e-11!59;CL:0000192!2.97e-10!42;CL:0000514!2.97e-10!42;CL:0000680!5.62e-10!57;CL:0000056!5.62e-10!57;CL:0000355!5.62e-10!57;CL:0000187!1.32e-09!54;CL:0000144!1.74e-09!625;CL:0000548!7.60e-09!679;CL:0000004!7.60e-09!679;CL:0000255!7.60e-09!679;CL:0000012!1.11e-08!682;CL:0000393!1.44e-08!60;CL:0000211!1.44e-08!60;CL:0000359!4.00e-08!32;CL:0002620!4.33e-08!23;CL:0000066!7.58e-08!254;CL:0000213!4.90e-07!57;CL:0000215!4.90e-07!57;CL:1000449!6.91e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.14e-08;23!CL:0000192;6.14e-08;43!CL:0000057;8.38e-08;73!CL:0000359;9.04e-08;32!CL:1000449;6.65e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,6.08e-23,250;CL:0000057,9.11e-18,76;CL:0000222,1.28e-17,121;CL:0000192,2.31e-10,43;CL:0000514,2.31e-10,43;CL:0000680,4.21e-10,58;CL:0000056,4.21e-10,58;CL:0000355,4.21e-10,58;CL:0000187,9.96e-10,55;CL:0000393,1.09e-08,61;CL:0000211,1.09e-08,61;CL:0000359,3.78e-08,32;CL:0002620,4.09e-08,23;CL:0000066,1.32e-07,253;CL:0000213,5.57e-07,58;CL:0000215,5.57e-07,58;CL:1000449,6.72e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;6.14e-08;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004573;6.95e-10;33!UBERON:0004571;6.95e-10;33!UBERON:0001637;7.49e-10;42!UBERON:0003509;7.49e-10;42!UBERON:0004572;7.49e-10;42!UBERON:0000947;6.26e-09;21!UBERON:0010191;6.26e-09;21!UBERON:0003914;3.56e-08;74!UBERON:0007500;9.62e-08;56!UBERON:0001981;9.62e-08;56!UBERON:0004537;9.62e-08;56!UBERON:0006555;6.65e-07;15!UBERON:0004819;6.65e-07;15!UBERON:0001285;6.65e-07;15!UBERON:0007684;6.65e-07;15 | |||
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| ||
|short_description=p1@SH3BP4 | |short_description=p1@SH3BP4 | ||
}} | }} |
Latest revision as of 01:28, 16 September 2015
Short description: | p1@SH3BP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SH3BP4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000484097_5end |
EntrezGene: | SH3BP4 |
HGNC: | 10826 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 6.08e-23 | 250 |
fibroblast | 9.11e-18 | 76 |
mesodermal cell | 1.28e-17 | 121 |
smooth muscle cell | 2.31e-10 | 43 |
smooth muscle myoblast | 2.31e-10 | 43 |
muscle precursor cell | 4.21e-10 | 58 |
myoblast | 4.21e-10 | 58 |
multi-potent skeletal muscle stem cell | 4.21e-10 | 58 |
muscle cell | 9.96e-10 | 55 |
electrically responsive cell | 1.09e-08 | 61 |
electrically active cell | 1.09e-08 | 61 |
vascular associated smooth muscle cell | 3.78e-08 | 32 |
skin fibroblast | 4.09e-08 | 23 |
epithelial cell | 1.32e-07 | 253 |
lining cell | 5.57e-07 | 58 |
barrier cell | 5.57e-07 | 58 |
epithelial cell of nephron | 6.72e-07 | 15 |