FFCP PHASE1:Hg19::chr8:55370720..55370733,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64321 | |EntrezGene=64321 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18122 | |HGNC=18122 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=23bp_to_BC140307_5end | |association_with_transcript=23bp_to_BC140307_5end | ||
|cluster_id=chr8:55370720..55370733,+ | |||
|coexpression_cluster_id=C4762 | |coexpression_cluster_id=C4762 | ||
|description=CAGE_peak_2_at_SOX17_5end | |description=CAGE_peak_2_at_SOX17_5end | ||
|id=chr8:55370720..55370733,+ | |id=chr8:55370720..55370733,+ | ||
|ontology_enrichment_celltype=CL:0000222!5.77e-32!119;CL:0002139!1.16e-28!24;CL:0000359!1.97e-27!32;CL:0000115!3.44e-27!35;CL:0000071!1.50e-21!18;CL:0002546!1.50e-21!18;CL:0002078!4.29e-21!44;CL:0000192!1.61e-18!42;CL:0000514!1.61e-18!42;CL:0000213!1.78e-18!57;CL:0000215!1.78e-18!57;CL:0000183!4.31e-17!59;CL:0000187!4.33e-17!54;CL:0000393!1.78e-16!60;CL:0000211!1.78e-16!60;CL:0000680!1.24e-15!57;CL:0000056!1.24e-15!57;CL:0000355!1.24e-15!57;CL:0002539!1.23e-13!10;CL:0002494!3.60e-12!16;CL:0000220!3.33e-11!246;CL:0002321!5.99e-11!248;CL:1000413!1.69e-10!9;CL:0002543!6.15e-09!6;CL:0005020!1.17e-08!6;CL:0002138!1.17e-08!6;CL:0005022!1.17e-08!6;CL:0002595!1.91e-07!5 | |ontology_enrichment_celltype=CL:0000222!5.77e-32!119;CL:0002139!1.16e-28!24;CL:0000359!1.97e-27!32;CL:0000115!3.44e-27!35;CL:0000071!1.50e-21!18;CL:0002546!1.50e-21!18;CL:0002078!4.29e-21!44;CL:0000192!1.61e-18!42;CL:0000514!1.61e-18!42;CL:0000213!1.78e-18!57;CL:0000215!1.78e-18!57;CL:0000183!4.31e-17!59;CL:0000187!4.33e-17!54;CL:0000393!1.78e-16!60;CL:0000211!1.78e-16!60;CL:0000680!1.24e-15!57;CL:0000056!1.24e-15!57;CL:0000355!1.24e-15!57;CL:0002539!1.23e-13!10;CL:0002494!3.60e-12!16;CL:0000220!3.33e-11!246;CL:0002321!5.99e-11!248;CL:1000413!1.69e-10!9;CL:0002543!6.15e-09!6;CL:0005020!1.17e-08!6;CL:0002138!1.17e-08!6;CL:0005022!1.17e-08!6;CL:0002595!1.91e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002139;3.32e-54;24!CL:0000359;1.10e-47;32!CL:0000071;5.83e-43;18!CL:0000115;8.99e-43;36!CL:0000192;2.19e-26;43!CL:0002078;9.23e-25;45!CL:1000413;1.91e-22;9!CL:0002539;1.46e-19;10!CL:0002543;1.36e-18;6!CL:0000213;7.09e-18;58!CL:0000215;7.09e-18;58!CL:0002494;7.57e-17;16!CL:0000187;5.47e-15;55!CL:0000393;7.30e-14;61!CL:0000211;7.30e-14;61!CL:0002544;9.67e-14;6!CL:0002138;9.08e-13;6!CL:0002594;9.33e-13;4!CL:0002595;2.21e-10;5!CL:0002592;3.02e-10;3!CL:0002618;1.35e-09;3!CL:0002548;4.87e-08;6!CL:0002262;1.16e-07;2!CL:0002545;1.16e-07;2!CL:1000398;1.16e-07;2!CL:0002596;2.59e-07;2!CL:0002593;4.15e-07;2!CL:0002589;4.62e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.90e-57,121;CL:0002139,5.15e-54,24;CL:0000359,5.98e-51,32;CL:0000115,5.84e-50,36;CL:0000071,1.09e-42,18;CL:0002546,1.09e-42,18;CL:0002078,1.48e-38,45;CL:0000192,3.31e-36,43;CL:0000514,3.31e-36,43;CL:0000187,6.58e-32,55;CL:0000680,6.86e-30,58;CL:0000056,6.86e-30,58;CL:0000355,6.86e-30,58;CL:0000213,2.37e-28,58;CL:0000215,2.37e-28,58;CL:0000393,4.51e-28,61;CL:0000211,4.51e-28,61;CL:0002321,2.49e-23,250;CL:1000413,1.87e-22,9;CL:0002539,1.32e-19,10;CL:0002543,2.83e-18,6;CL:0002494,6.28e-17,16;CL:0002544,8.39e-14,6;CL:0002594,6.86e-13,4;CL:0005020,7.72e-13,6;CL:0002138,7.72e-13,6;CL:0005022,7.72e-13,6;CL:0002592,2.71e-10,3;CL:0002595,2.82e-10,5;CL:0002618,2.32e-09,3;CL:0000076,2.84e-09,63;CL:0002548,4.74e-08,6;CL:0002545,1.02e-07,2;CL:0002262,1.17e-07,2;CL:1000398,1.17e-07,2;CL:0002596,1.89e-07,2;CL:0002589,4.56e-07,2;CL:0002593,5.00e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002546;5.83e-43;18!CL:0000514;2.19e-26;43!CL:0000355;2.54e-15;58!CL:0005022;9.08e-13;6!CL:0000222;1.87e-12;121 | |||
|ontology_enrichment_disease=DOID:193!6.30e-08!29;DOID:120!7.52e-08!27;DOID:2394!1.57e-07!14 | |ontology_enrichment_disease=DOID:193!6.30e-08!29;DOID:120!7.52e-08!27;DOID:2394!1.57e-07!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.72e-64!84;UBERON:0000055!1.93e-62!69;UBERON:0001981!1.01e-58!60;UBERON:0007500!1.01e-58!60;UBERON:0004537!1.01e-58!60;UBERON:0006965!1.01e-58!60;UBERON:0003914!1.76e-52!118;UBERON:0002049!1.28e-51!79;UBERON:0007798!1.28e-51!79;UBERON:0001009!5.37e-50!113;UBERON:0004535!3.96e-49!110;UBERON:0001637!1.91e-47!42;UBERON:0003509!1.91e-47!42;UBERON:0004572!1.91e-47!42;UBERON:0004573!6.66e-36!33;UBERON:0004571!6.66e-36!33;UBERON:0000025!2.33e-31!194;UBERON:0004111!2.08e-27!241;UBERON:0000477!2.34e-25!286;UBERON:0000490!7.54e-23!138;UBERON:0001986!1.50e-21!18;UBERON:0004638!1.50e-21!18;UBERON:0004852!1.50e-21!18;UBERON:0000947!3.19e-21!21;UBERON:0010191!3.19e-21!21;UBERON:0000487!2.41e-18!22;UBERON:0003081!5.36e-18!216;UBERON:0000119!2.62e-16!312;UBERON:0000483!3.18e-16!309;UBERON:0006914!2.26e-15!25;UBERON:0001134!7.37e-15!61;UBERON:0002036!7.37e-15!61;UBERON:0003082!7.37e-15!61;UBERON:0007100!1.19e-14!27;UBERON:0000948!4.51e-14!24;UBERON:0005498!4.51e-14!24;UBERON:0004140!4.51e-14!24;UBERON:0009881!4.51e-14!24;UBERON:0004141!4.51e-14!24;UBERON:0003084!4.51e-14!24;UBERON:0007005!4.51e-14!24;UBERON:0004139!4.51e-14!24;UBERON:0004291!4.51e-14!24;UBERON:0002385!4.71e-14!63;UBERON:0001015!4.71e-14!63;UBERON:0000383!4.71e-14!63;UBERON:0004237!1.23e-13!10;UBERON:0004695!1.23e-13!10;UBERON:0002111!1.23e-13!10;UBERON:0004178!1.23e-13!10;UBERON:0004290!1.40e-12!70;UBERON:0000926!1.87e-12!448;UBERON:0004120!1.87e-12!448;UBERON:0006603!1.87e-12!448;UBERON:0003513!6.98e-11!8;UBERON:0003103!9.04e-11!69;UBERON:0003915!1.69e-10!9;UBERON:0004700!1.69e-10!9;UBERON:0001917!1.69e-10!9;UBERON:0005256!9.55e-10!143;UBERON:0000486!2.81e-09!82;UBERON:0000914!4.73e-09!83;UBERON:0002329!4.73e-09!83;UBERON:0003077!4.73e-09!83;UBERON:0003059!4.73e-09!83;UBERON:0007282!4.73e-09!83;UBERON:0009618!4.73e-09!83;UBERON:0007285!4.73e-09!83;UBERON:0000467!7.89e-09!625;UBERON:0000480!9.36e-09!626;UBERON:0001135!4.11e-08!15;UBERON:0000468!4.80e-08!659;UBERON:0000992!7.88e-08!13;UBERON:0003498!1.00e-07!5;UBERON:0005985!1.00e-07!5;UBERON:0003834!1.91e-07!5;UBERON:0001533!1.91e-07!5;UBERON:0002100!4.36e-07!216;UBERON:0001638!4.51e-07!9;UBERON:0003920!4.51e-07!9;UBERON:0004582!4.51e-07!9;UBERON:0000922!7.03e-07!612 | |ontology_enrichment_uberon=UBERON:0004872!1.72e-64!84;UBERON:0000055!1.93e-62!69;UBERON:0001981!1.01e-58!60;UBERON:0007500!1.01e-58!60;UBERON:0004537!1.01e-58!60;UBERON:0006965!1.01e-58!60;UBERON:0003914!1.76e-52!118;UBERON:0002049!1.28e-51!79;UBERON:0007798!1.28e-51!79;UBERON:0001009!5.37e-50!113;UBERON:0004535!3.96e-49!110;UBERON:0001637!1.91e-47!42;UBERON:0003509!1.91e-47!42;UBERON:0004572!1.91e-47!42;UBERON:0004573!6.66e-36!33;UBERON:0004571!6.66e-36!33;UBERON:0000025!2.33e-31!194;UBERON:0004111!2.08e-27!241;UBERON:0000477!2.34e-25!286;UBERON:0000490!7.54e-23!138;UBERON:0001986!1.50e-21!18;UBERON:0004638!1.50e-21!18;UBERON:0004852!1.50e-21!18;UBERON:0000947!3.19e-21!21;UBERON:0010191!3.19e-21!21;UBERON:0000487!2.41e-18!22;UBERON:0003081!5.36e-18!216;UBERON:0000119!2.62e-16!312;UBERON:0000483!3.18e-16!309;UBERON:0006914!2.26e-15!25;UBERON:0001134!7.37e-15!61;UBERON:0002036!7.37e-15!61;UBERON:0003082!7.37e-15!61;UBERON:0007100!1.19e-14!27;UBERON:0000948!4.51e-14!24;UBERON:0005498!4.51e-14!24;UBERON:0004140!4.51e-14!24;UBERON:0009881!4.51e-14!24;UBERON:0004141!4.51e-14!24;UBERON:0003084!4.51e-14!24;UBERON:0007005!4.51e-14!24;UBERON:0004139!4.51e-14!24;UBERON:0004291!4.51e-14!24;UBERON:0002385!4.71e-14!63;UBERON:0001015!4.71e-14!63;UBERON:0000383!4.71e-14!63;UBERON:0004237!1.23e-13!10;UBERON:0004695!1.23e-13!10;UBERON:0002111!1.23e-13!10;UBERON:0004178!1.23e-13!10;UBERON:0004290!1.40e-12!70;UBERON:0000926!1.87e-12!448;UBERON:0004120!1.87e-12!448;UBERON:0006603!1.87e-12!448;UBERON:0003513!6.98e-11!8;UBERON:0003103!9.04e-11!69;UBERON:0003915!1.69e-10!9;UBERON:0004700!1.69e-10!9;UBERON:0001917!1.69e-10!9;UBERON:0005256!9.55e-10!143;UBERON:0000486!2.81e-09!82;UBERON:0000914!4.73e-09!83;UBERON:0002329!4.73e-09!83;UBERON:0003077!4.73e-09!83;UBERON:0003059!4.73e-09!83;UBERON:0007282!4.73e-09!83;UBERON:0009618!4.73e-09!83;UBERON:0007285!4.73e-09!83;UBERON:0000467!7.89e-09!625;UBERON:0000480!9.36e-09!626;UBERON:0001135!4.11e-08!15;UBERON:0000468!4.80e-08!659;UBERON:0000992!7.88e-08!13;UBERON:0003498!1.00e-07!5;UBERON:0005985!1.00e-07!5;UBERON:0003834!1.91e-07!5;UBERON:0001533!1.91e-07!5;UBERON:0002100!4.36e-07!216;UBERON:0001638!4.51e-07!9;UBERON:0003920!4.51e-07!9;UBERON:0004582!4.51e-07!9;UBERON:0000922!7.03e-07!612 | ||
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|short_description=p2@SOX17 | |short_description=p2@SOX17 | ||
}} | }} |
Latest revision as of 12:40, 18 September 2015
Short description: | p2@SOX17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SOX17_5end |
Coexpression cluster: | C4762_Endothelial_Wilms_mature_Renal_endometrioid_Smooth_Lymphatic |
Association with transcript: | 23bp_to_BC140307_5end |
EntrezGene: | SOX17 |
HGNC: | 18122 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data