FFCP PHASE1:Hg19::chr1:208417309..208417348,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:208417309..208417348,-
|short_description=p5@PLXNA2
|description=CAGE_peak_5_at_PLXNA2_5end
|association_with_transcript=297bp_to_ENST00000486969_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5362 | |EntrezGene=5362 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9100 | |HGNC=9100 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=297bp_to_ENST00000486969_5end | |||
|cluster_id=chr1:208417309..208417348,- | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_5_at_PLXNA2_5end | |||
|id=chr1:208417309..208417348,- | |||
|ontology_enrichment_celltype=CL:0002139!7.34e-24!24;CL:0000115!2.61e-22!35;CL:0000071!1.96e-18!18;CL:0002546!1.96e-18!18;CL:0002078!6.46e-17!44;CL:0000213!6.68e-13!57;CL:0000215!6.68e-13!57;CL:1000413!5.30e-10!9;CL:0002544!3.54e-07!6;CL:0002543!3.69e-07!6;CL:0005020!5.63e-07!6;CL:0002138!5.63e-07!6;CL:0005022!5.63e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;7.52e-42;24!CL:0000115;8.69e-35;36!CL:0000071;5.54e-32;18!CL:0002078;7.00e-20;45!CL:1000413;9.20e-17;9!CL:0000213;7.17e-14;58!CL:0000215;7.17e-14;58!CL:0002544;1.10e-11;6!CL:0002543;1.23e-11;6!CL:0002138;2.34e-11;6!CL:0002144;7.72e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,7.88e-42,24;CL:0000115,3.05e-41,36;CL:0000071,5.39e-32,18;CL:0002546,5.39e-32,18;CL:0002078,7.96e-31,45;CL:0000213,1.40e-21,58;CL:0000215,1.40e-21,58;CL:1000413,9.23e-17,9;CL:0002544,1.10e-11,6;CL:0002543,1.18e-11,6;CL:0005020,2.52e-11,6;CL:0002138,2.52e-11,6;CL:0005022,2.52e-11,6;CL:0002144,7.78e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;5.54e-32;18!CL:0005022;2.34e-11;6!UBERON:0004872;6.66e-08;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;5.54e-32;18!UBERON:0001986;5.54e-32;18!UBERON:0004852;5.54e-32;18!UBERON:0000487;5.12e-25;22!UBERON:0006914;2.85e-21;25!UBERON:0003915;9.20e-17;9!UBERON:0004700;9.20e-17;9!UBERON:0001917;9.20e-17;9!UBERON:0000490;1.33e-13;33!UBERON:0007023;1.68e-10;114!UBERON:0000055;7.49e-10;65!UBERON:0001638;8.36e-10;9!UBERON:0003920;8.36e-10;9!UBERON:0004582;8.36e-10;9!UBERON:0000073;9.14e-09;53!UBERON:0002616;9.14e-09;53!UBERON:0003528;9.80e-09;34!UBERON:0002020;9.80e-09;34!UBERON:0001473;3.08e-08;8!UBERON:0004536;3.08e-08;8!UBERON:0006558;3.08e-08;8!UBERON:0002465;3.16e-08;10!UBERON:0002619;3.69e-08;22!UBERON:0002791;5.01e-08;32!UBERON:0002780;8.56e-08;41!UBERON:0001890;8.56e-08;41!UBERON:0007500;2.75e-07;56!UBERON:0001981;2.75e-07;56!UBERON:0004537;2.75e-07;56!UBERON:0007100;3.64e-07;25!UBERON:0001869;6.13e-07;32!UBERON:0001893;6.25e-07;34!UBERON:0000956;6.98e-07;25!UBERON:0000203;6.98e-07;25!UBERON:0010523;7.72e-07;3!UBERON:0001915;7.72e-07;3!UBERON:0001982;7.72e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.31e-42,114;UBERON:0004638,5.39e-32,18;UBERON:0001986,5.39e-32,18;UBERON:0004852,5.39e-32,18;UBERON:0004111,3.37e-25,240;UBERON:0000487,5.00e-25,22;UBERON:0000025,1.82e-23,192;UBERON:0006914,2.79e-21,25;UBERON:0000055,2.26e-19,68;UBERON:0003915,9.23e-17,9;UBERON:0004700,9.23e-17,9;UBERON:0001917,9.23e-17,9;UBERON:0002049,1.43e-15,78;UBERON:0007798,1.43e-15,78;UBERON:0004872,1.81e-15,83;UBERON:0001009,1.17e-14,112;UBERON:0007500,2.49e-14,59;UBERON:0001981,2.49e-14,59;UBERON:0004537,2.49e-14,59;UBERON:0006965,2.49e-14,59;UBERON:0001049,8.15e-14,56;UBERON:0005068,8.15e-14,56;UBERON:0006241,8.15e-14,56;UBERON:0007135,8.15e-14,56;UBERON:0000073,1.02e-13,53;UBERON:0002616,1.02e-13,53;UBERON:0000483,6.88e-13,306;UBERON:0000119,1.44e-12,309;UBERON:0004535,1.92e-12,109;UBERON:0003075,1.20e-11,82;UBERON:0007284,1.20e-11,82;UBERON:0010314,1.76e-11,132;UBERON:0003914,1.86e-11,117;UBERON:0002346,1.04e-10,86;UBERON:0003528,1.24e-10,34;UBERON:0002020,1.24e-10,34;UBERON:0002780,5.45e-10,41;UBERON:0001890,5.45e-10,41;UBERON:0003080,5.45e-10,41;UBERON:0006240,5.45e-10,41;UBERON:0001638,8.02e-10,9;UBERON:0003920,8.02e-10,9;UBERON:0004582,8.02e-10,9;UBERON:0000955,6.05e-09,68;UBERON:0006238,6.05e-09,68;UBERON:0002791,7.07e-09,32;UBERON:0001017,1.20e-08,81;UBERON:0001473,3.25e-08,8;UBERON:0004536,3.25e-08,8;UBERON:0006558,3.25e-08,8;UBERON:0002619,3.67e-08,22;UBERON:0001893,3.89e-08,34;UBERON:0002465,4.07e-08,10;UBERON:0001016,8.05e-08,89;UBERON:0001869,1.04e-07,32;UBERON:0003103,1.83e-07,68;UBERON:0010371,1.85e-07,104;UBERON:0000956,6.94e-07,25;UBERON:0000203,6.94e-07,25;UBERON:0010523,7.78e-07,3;UBERON:0001915,7.78e-07,3;UBERON:0001982,7.78e-07,3 | |||
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| ||
|short_description=p5@PLXNA2 | |||
}} | }} |
Latest revision as of 18:14, 24 September 2015
Short description: | p5@PLXNA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PLXNA2_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 297bp_to_ENST00000486969_5end |
EntrezGene: | PLXNA2 |
HGNC: | 9100 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 7.88e-42 | 24 |
endothelial cell | 3.05e-41 | 36 |
blood vessel endothelial cell | 5.39e-32 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.39e-32 | 18 |
meso-epithelial cell | 7.96e-31 | 45 |
lining cell | 1.40e-21 | 58 |
barrier cell | 1.40e-21 | 58 |
endothelial cell of artery | 9.23e-17 | 9 |
aortic endothelial cell | 1.10e-11 | 6 |
vein endothelial cell | 1.18e-11 | 6 |
lymphangioblast | 2.52e-11 | 6 |
endothelial cell of lymphatic vessel | 2.52e-11 | 6 |
vascular lymphangioblast | 2.52e-11 | 6 |
capillary endothelial cell | 7.78e-07 | 3 |