FFCP PHASE1:Hg19::chr1:21616901..21616963,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:21616901..21616963,-
|short_description=p2@ECE1
|description=CAGE_peak_2_at_ECE1_5end
|association_with_transcript=0bp_to_ENST00000436918,ENST00000526194_5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1889 | |EntrezGene=1889 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3146 | |HGNC=3146 | ||
|TSSclassifier=strong | |||
|UniProt=B4DKB2 | |UniProt=B4DKB2 | ||
|association_with_transcript=0bp_to_ENST00000436918,ENST00000526194_5end | |||
|cluster_id=chr1:21616901..21616963,- | |||
|description=CAGE_peak_2_at_ECE1_5end | |||
|id=chr1:21616901..21616963,- | |||
|ontology_enrichment_celltype=CL:0000222!2.32e-23!119;CL:0002371!2.14e-16!591;CL:0000144!2.74e-15!625;CL:0002057!1.10e-14!42;CL:0002078!1.15e-13!44;CL:0002139!3.15e-13!24;CL:0000220!3.43e-13!246;CL:0000115!8.09e-13!35;CL:0002321!9.99e-13!248;CL:0000548!1.16e-12!679;CL:0000004!1.16e-12!679;CL:0000255!1.16e-12!679;CL:0000192!1.18e-12!42;CL:0000514!1.18e-12!42;CL:0000860!1.36e-12!45;CL:0000012!3.58e-12!682;CL:0000359!4.27e-12!32;CL:0000183!6.28e-12!59;CL:0000213!1.36e-11!57;CL:0000215!1.36e-11!57;CL:0000071!1.90e-10!18;CL:0002546!1.90e-10!18;CL:0000680!2.09e-10!57;CL:0000056!2.09e-10!57;CL:0000355!2.09e-10!57;CL:0000187!3.67e-10!54;CL:0000003!4.33e-10!722;CL:0000057!3.01e-08!75;CL:0000055!4.39e-08!180;CL:1000449!1.57e-07!16;CL:0000393!4.42e-07!60;CL:0000211!4.42e-07!60;CL:1000413!7.98e-07!9;CL:1000497!9.39e-07!18;CL:0002518!9.39e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.35e-15;33!CL:0002057;9.35e-15;33!CL:0002139;3.19e-13;24!CL:0000359;1.96e-11;32!CL:0000115;2.06e-11;36!CL:0000071;1.93e-10;18!CL:0002078;2.03e-09;45!CL:0000192;4.12e-09;43!CL:0000473;1.29e-08;39!CL:0000234;1.29e-08;39!CL:1000449;8.87e-08;15!CL:0000213;1.10e-07;58!CL:0000215;1.10e-07;58!CL:1000497;5.84e-07;17!CL:0002518;5.84e-07;17!CL:1000413;7.88e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.31e-24,121;CL:0000860,1.07e-14,42;CL:0002057,1.07e-14,42;CL:0002078,3.08e-14,45;CL:0000115,2.09e-13,36;CL:0002139,3.09e-13,24;CL:0002321,4.04e-13,250;CL:0000192,1.58e-12,43;CL:0000514,1.58e-12,43;CL:0000359,4.20e-12,32;CL:0000213,4.21e-12,58;CL:0000215,4.21e-12,58;CL:0000473,1.37e-10,48;CL:0000234,1.37e-10,48;CL:0000071,1.88e-10,18;CL:0002546,1.88e-10,18;CL:0000680,2.36e-10,58;CL:0000056,2.36e-10,58;CL:0000355,2.36e-10,58;CL:0000187,4.17e-10,55;CL:0000057,1.48e-08,76;CL:1000449,8.67e-08,15;CL:0000393,4.59e-07,61;CL:0000211,4.59e-07,61;CL:1000497,5.65e-07,17;CL:0002518,5.65e-07,17;CL:1000413,7.91e-07,9;CL:0000076,8.78e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002057;2.87e-11;42!CL:0002546;1.93e-10;18!CL:0000514;4.12e-09;43!CL:0000222;2.03e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001009!7.04e-30!113;UBERON:0004535!8.79e-30!110;UBERON:0003081!6.25e-28!216;UBERON:0002049!4.44e-27!79;UBERON:0007798!4.44e-27!79;UBERON:0000055!6.39e-27!69;UBERON:0004872!1.02e-24!84;UBERON:0001981!5.25e-23!60;UBERON:0007500!5.25e-23!60;UBERON:0004537!5.25e-23!60;UBERON:0006965!5.25e-23!60;UBERON:0003914!5.77e-23!118;UBERON:0000926!5.13e-22!448;UBERON:0004120!5.13e-22!448;UBERON:0006603!5.13e-22!448;UBERON:0000480!2.87e-19!626;UBERON:0000467!3.35e-19!625;UBERON:0001637!1.40e-17!42;UBERON:0003509!1.40e-17!42;UBERON:0004572!1.40e-17!42;UBERON:0000468!2.19e-16!659;UBERON:0004573!1.39e-13!33;UBERON:0004571!1.39e-13!33;UBERON:0000490!5.84e-12!138;UBERON:0000486!5.04e-11!82;UBERON:0000923!5.61e-11!604;UBERON:0005291!5.61e-11!604;UBERON:0006598!5.61e-11!604;UBERON:0002532!5.61e-11!604;UBERON:0002050!5.84e-11!605;UBERON:0005423!5.84e-11!605;UBERON:0005256!7.11e-11!143;UBERON:0001986!1.90e-10!18;UBERON:0004638!1.90e-10!18;UBERON:0004852!1.90e-10!18;UBERON:0000487!1.92e-10!22;UBERON:0000922!6.28e-10!612;UBERON:0002100!1.84e-09!216;UBERON:0004290!2.71e-09!70;UBERON:0001134!5.96e-09!61;UBERON:0002036!5.96e-09!61;UBERON:0003082!5.96e-09!61;UBERON:0006914!6.58e-09!25;UBERON:0000947!9.56e-09!21;UBERON:0010191!9.56e-09!21;UBERON:0000914!1.24e-08!83;UBERON:0002329!1.24e-08!83;UBERON:0003077!1.24e-08!83;UBERON:0003059!1.24e-08!83;UBERON:0007282!1.24e-08!83;UBERON:0009618!1.24e-08!83;UBERON:0007285!1.24e-08!83;UBERON:0002385!3.29e-08!63;UBERON:0001015!3.29e-08!63;UBERON:0000383!3.29e-08!63;UBERON:0000119!1.49e-07!312;UBERON:0004211!1.57e-07!16;UBERON:0001285!1.57e-07!16;UBERON:0007684!1.57e-07!16;UBERON:0003220!1.57e-07!16;UBERON:0004208!1.57e-07!16;UBERON:0000353!3.21e-07!17;UBERON:0000483!3.31e-07!309;UBERON:0006555!5.20e-07!17;UBERON:0005103!5.20e-07!17;UBERON:0000083!5.20e-07!17;UBERON:0009201!5.20e-07!17;UBERON:0004819!5.20e-07!17;UBERON:0006553!5.20e-07!17;UBERON:0003074!5.20e-07!17;UBERON:0003060!5.20e-07!17;UBERON:0002204!5.26e-07!167;UBERON:0004876!5.71e-07!20;UBERON:0003104!6.89e-07!238;UBERON:0009142!6.89e-07!238;UBERON:0003915!7.98e-07!9;UBERON:0004700!7.98e-07!9;UBERON:0001917!7.98e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.11e-13;42!UBERON:0003509;1.11e-13;42!UBERON:0004572;1.11e-13;42!UBERON:0000055;2.50e-13;65!UBERON:0007500;8.60e-13;56!UBERON:0001981;8.60e-13;56!UBERON:0004537;8.60e-13;56!UBERON:0003914;8.75e-13;74!UBERON:0004573;1.16e-12;33!UBERON:0004571;1.16e-12;33!UBERON:0002049;1.01e-10;75!UBERON:0007798;1.01e-10;75!UBERON:0000487;1.92e-10;22!UBERON:0004638;1.93e-10;18!UBERON:0001986;1.93e-10;18!UBERON:0004852;1.93e-10;18!UBERON:0006914;6.38e-09;25!UBERON:0000947;9.86e-09;21!UBERON:0010191;9.86e-09;21!UBERON:0000025;1.64e-08;93!UBERON:0001009;1.81e-08;112!UBERON:0004535;2.17e-08;109!UBERON:0000490;2.57e-08;33!UBERON:0006555;8.87e-08;15!UBERON:0004819;8.87e-08;15!UBERON:0001285;8.87e-08;15!UBERON:0007684;8.87e-08;15!UBERON:0000353;5.54e-07;15!UBERON:0003915;7.88e-07;9!UBERON:0004700;7.88e-07;9!UBERON:0001917;7.88e-07;9 | |||
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| ||
|short_description=p2@ECE1 | |||
}} | }} |
Latest revision as of 02:56, 25 September 2015
Short description: | p2@ECE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ECE1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000436918, ENST00000526194_5end |
EntrezGene: | ECE1 |
HGNC: | 3146 |
UniProt: | B4DKB2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.31e-24 | 121 |
classical monocyte | 1.07e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.07e-14 | 42 |
meso-epithelial cell | 3.08e-14 | 45 |
endothelial cell | 2.09e-13 | 36 |
endothelial cell of vascular tree | 3.09e-13 | 24 |
embryonic cell | 4.04e-13 | 250 |
smooth muscle cell | 1.58e-12 | 43 |
smooth muscle myoblast | 1.58e-12 | 43 |
vascular associated smooth muscle cell | 4.20e-12 | 32 |
lining cell | 4.21e-12 | 58 |
barrier cell | 4.21e-12 | 58 |
defensive cell | 1.37e-10 | 48 |
phagocyte | 1.37e-10 | 48 |
blood vessel endothelial cell | 1.88e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.88e-10 | 18 |
muscle precursor cell | 2.36e-10 | 58 |
myoblast | 2.36e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.36e-10 | 58 |
muscle cell | 4.17e-10 | 55 |
fibroblast | 1.48e-08 | 76 |
epithelial cell of nephron | 8.67e-08 | 15 |
electrically responsive cell | 4.59e-07 | 61 |
electrically active cell | 4.59e-07 | 61 |
kidney cell | 5.65e-07 | 17 |
kidney epithelial cell | 5.65e-07 | 17 |
endothelial cell of artery | 7.91e-07 | 9 |
squamous epithelial cell | 8.78e-07 | 63 |