FFCP PHASE1:Hg19::chr1:36396763..36396787,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:36396763..36396787,+
|short_description=p4@EIF2C3
|description=CAGE_peak_4_at_EIF2C3_5end
|association_with_transcript=0bp_to_uc001bzo.2,uc001bzp.2,uc001bz...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=192669 | |EntrezGene=192669 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18421 | |HGNC=18421 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc001bzo.2,uc001bzp.2,uc001bzq.2_5end | |||
|cluster_id=chr1:36396763..36396787,+ | |||
|description=CAGE_peak_4_at_EIF2C3_5end | |||
|id=chr1:36396763..36396787,+ | |||
|ontology_enrichment_celltype=CL:0000037!6.16e-14!172;CL:0000566!6.16e-14!172;CL:0000738!2.80e-13!140;CL:0000766!5.36e-13!76;CL:0000988!6.83e-13!182;CL:0002032!7.19e-13!165;CL:0000837!7.19e-13!165;CL:0000763!7.79e-13!112;CL:0000049!7.79e-13!112;CL:0000860!1.48e-11!45;CL:0002057!3.45e-11!42;CL:0000557!4.71e-11!71;CL:0000839!1.13e-09!70;CL:0002087!2.69e-09!119;CL:0002194!2.74e-09!63;CL:0000576!2.74e-09!63;CL:0000040!2.74e-09!63;CL:0000559!2.74e-09!63;CL:0002031!3.33e-09!124;CL:0002009!4.25e-09!65 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.18e-13;33!CL:0002057;3.18e-13;33!CL:0000473;2.32e-09;39!CL:0000234;2.32e-09;39!CL:0000576;1.33e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,8.19e-14,168;CL:0000738,2.22e-13,136;CL:0000988,4.27e-13,177;CL:0000766,4.41e-13,72;CL:0000763,1.14e-12,108;CL:0000049,1.14e-12,108;CL:0002032,1.15e-12,161;CL:0000837,1.15e-12,161;CL:0000860,5.23e-12,42;CL:0002057,5.23e-12,42;CL:0000557,2.66e-11,67;CL:0000473,4.97e-10,48;CL:0000234,4.97e-10,48;CL:0000839,5.43e-10,66;CL:0002031,2.18e-09,120;CL:0002194,2.64e-09,59;CL:0000576,2.64e-09,59;CL:0000040,2.64e-09,59;CL:0000559,2.64e-09,59;CL:0002087,3.06e-09,115;CL:0002009,3.69e-09,61 | |||
|ontology_enrichment_development_v019=CL:0002057;7.19e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.01e-14!57;UBERON:0005068!1.01e-14!57;UBERON:0006241!1.01e-14!57;UBERON:0007135!1.01e-14!57;UBERON:0002616!2.00e-12!59;UBERON:0001017!4.43e-12!82;UBERON:0000955!6.97e-11!69;UBERON:0006238!6.97e-11!69;UBERON:0005743!8.02e-11!86;UBERON:0007023!1.52e-10!115;UBERON:0002780!1.84e-10!41;UBERON:0001890!1.84e-10!41;UBERON:0006240!1.84e-10!41;UBERON:0000073!1.89e-10!94;UBERON:0001016!1.89e-10!94;UBERON:0003080!5.32e-10!42;UBERON:0002390!2.14e-09!102;UBERON:0003061!2.14e-09!102;UBERON:0001474!9.42e-09!86;UBERON:0002371!1.84e-08!80;UBERON:0002346!1.96e-08!90;UBERON:0001893!2.52e-08!34;UBERON:0002020!2.90e-08!34;UBERON:0003528!2.90e-08!34;UBERON:0002791!3.46e-08!33;UBERON:0002193!4.80e-08!112;UBERON:0003075!7.55e-08!86;UBERON:0007284!7.55e-08!86;UBERON:0002405!1.12e-07!115;UBERON:0001869!2.25e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;5.95e-09;53!UBERON:0002616;5.95e-09;53!UBERON:0002780;2.82e-08;41!UBERON:0001890;2.82e-08;41!UBERON:0003528;2.66e-07;34!UBERON:0002020;2.66e-07;34!UBERON:0001893;3.44e-07;34!UBERON:0002791;3.48e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.95e-17,56;UBERON:0005068,7.95e-17,56;UBERON:0006241,7.95e-17,56;UBERON:0007135,7.95e-17,56;UBERON:0000073,4.85e-15,53;UBERON:0002616,4.85e-15,53;UBERON:0001017,2.57e-13,81;UBERON:0001016,9.56e-13,89;UBERON:0000955,2.83e-12,68;UBERON:0006238,2.83e-12,68;UBERON:0002346,6.97e-12,86;UBERON:0002780,9.16e-12,41;UBERON:0001890,9.16e-12,41;UBERON:0003080,9.16e-12,41;UBERON:0006240,9.16e-12,41;UBERON:0003075,3.49e-11,82;UBERON:0007284,3.49e-11,82;UBERON:0002390,1.71e-09,98;UBERON:0003061,1.71e-09,98;UBERON:0001893,2.22e-09,34;UBERON:0003528,2.59e-09,34;UBERON:0002020,2.59e-09,34;UBERON:0007023,3.23e-09,114;UBERON:0002791,1.08e-08,32;UBERON:0001474,1.13e-08,82;UBERON:0003056,1.40e-08,61;UBERON:0002371,1.74e-08,76;UBERON:0001869,2.58e-08,32;UBERON:0002193,1.40e-07,108;UBERON:0002405,1.67e-07,93;UBERON:0010371,9.23e-07,104 | |||
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| ||
|short_description=p4@EIF2C3 | |||
}} | }} |
Latest revision as of 20:06, 17 September 2015
Short description: | p4@EIF2C3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_EIF2C3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc001bzo.2, uc001bzp.2, uc001bzq.2_5end |
EntrezGene: | EIF2C3 |
HGNC: | 18421 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 8.19e-14 | 168 |
leukocyte | 2.22e-13 | 136 |
hematopoietic cell | 4.27e-13 | 177 |
myeloid leukocyte | 4.41e-13 | 72 |
myeloid cell | 1.14e-12 | 108 |
common myeloid progenitor | 1.14e-12 | 108 |
hematopoietic oligopotent progenitor cell | 1.15e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.15e-12 | 161 |
classical monocyte | 5.23e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.23e-12 | 42 |
granulocyte monocyte progenitor cell | 2.66e-11 | 67 |
defensive cell | 4.97e-10 | 48 |
phagocyte | 4.97e-10 | 48 |
myeloid lineage restricted progenitor cell | 5.43e-10 | 66 |
hematopoietic lineage restricted progenitor cell | 2.18e-09 | 120 |
monopoietic cell | 2.64e-09 | 59 |
monocyte | 2.64e-09 | 59 |
monoblast | 2.64e-09 | 59 |
promonocyte | 2.64e-09 | 59 |
nongranular leukocyte | 3.06e-09 | 115 |
macrophage dendritic cell progenitor | 3.69e-09 | 61 |
Ontology term | p-value | n |
---|---|---|
neural tube | 7.95e-17 | 56 |
neural rod | 7.95e-17 | 56 |
future spinal cord | 7.95e-17 | 56 |
neural keel | 7.95e-17 | 56 |
regional part of nervous system | 4.85e-15 | 53 |
regional part of brain | 4.85e-15 | 53 |
central nervous system | 2.57e-13 | 81 |
nervous system | 9.56e-13 | 89 |
brain | 2.83e-12 | 68 |
future brain | 2.83e-12 | 68 |
neurectoderm | 6.97e-12 | 86 |
regional part of forebrain | 9.16e-12 | 41 |
forebrain | 9.16e-12 | 41 |
anterior neural tube | 9.16e-12 | 41 |
future forebrain | 9.16e-12 | 41 |
neural plate | 3.49e-11 | 82 |
presumptive neural plate | 3.49e-11 | 82 |
hematopoietic system | 1.71e-09 | 98 |
blood island | 1.71e-09 | 98 |
telencephalon | 2.22e-09 | 34 |
brain grey matter | 2.59e-09 | 34 |
gray matter | 2.59e-09 | 34 |
adult organism | 3.23e-09 | 114 |
regional part of telencephalon | 1.08e-08 | 32 |
bone element | 1.13e-08 | 82 |
pre-chordal neural plate | 1.40e-08 | 61 |
bone marrow | 1.74e-08 | 76 |
cerebral hemisphere | 2.58e-08 | 32 |
hemolymphoid system | 1.40e-07 | 108 |
immune system | 1.67e-07 | 93 |
ecto-epithelium | 9.23e-07 | 104 |