FFCP PHASE1:Hg19::chr5:33892167..33892190,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81792 | |EntrezGene=81792 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14605 | |HGNC=14605 | ||
|TSSclassifier=strong | |||
|UniProt=D6REX0,P58397 | |UniProt=D6REX0,P58397 | ||
|association_with_transcript=-43bp_to_ENST00000515401,NM_030955,uc003jia.1,uc003jib.1,uc010iuq.1_5end | |association_with_transcript=-43bp_to_ENST00000515401,NM_030955,uc003jia.1,uc003jib.1,uc010iuq.1_5end | ||
|cluster_id=chr5:33892167..33892190,- | |||
|coexpression_cluster_id=C1960 | |coexpression_cluster_id=C1960 | ||
|description=CAGE_peak_4_at_ADAMTS12_5end | |description=CAGE_peak_4_at_ADAMTS12_5end | ||
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|ontology_enrichment_celltype=CL:0000055!1.02e-34!180;CL:0000183!2.93e-22!59;CL:0000187!3.03e-22!54;CL:0000680!1.65e-21!57;CL:0000056!1.65e-21!57;CL:0000355!1.65e-21!57;CL:0000393!2.05e-21!60;CL:0000211!2.05e-21!60;CL:0000192!2.46e-19!42;CL:0000514!2.46e-19!42;CL:0000057!2.99e-19!75;CL:0000359!7.40e-16!32;CL:0000222!2.71e-13!119;CL:0002494!4.13e-09!16;CL:0000136!1.88e-07!15;CL:0002620!4.16e-07!23;CL:0002539!4.55e-07!10 | |ontology_enrichment_celltype=CL:0000055!1.02e-34!180;CL:0000183!2.93e-22!59;CL:0000187!3.03e-22!54;CL:0000680!1.65e-21!57;CL:0000056!1.65e-21!57;CL:0000355!1.65e-21!57;CL:0000393!2.05e-21!60;CL:0000211!2.05e-21!60;CL:0000192!2.46e-19!42;CL:0000514!2.46e-19!42;CL:0000057!2.99e-19!75;CL:0000359!7.40e-16!32;CL:0000222!2.71e-13!119;CL:0002494!4.13e-09!16;CL:0000136!1.88e-07!15;CL:0002620!4.16e-07!23;CL:0002539!4.55e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000359;7.41e-18;32!CL:0000192;1.18e-14;43!CL:0000187;2.65e-14;55!CL:0000393;9.73e-12;61!CL:0000211;9.73e-12;61!CL:0002494;2.98e-11;16!CL:0002539;1.56e-08;10!CL:0000136;1.65e-08;13!CL:0000057;2.26e-08;73!CL:0000723;9.08e-07;61 | |ontology_enrichment_celltype_v019=CL:0000359;7.41e-18;32!CL:0000192;1.18e-14;43!CL:0000187;2.65e-14;55!CL:0000393;9.73e-12;61!CL:0000211;9.73e-12;61!CL:0002494;2.98e-11;16!CL:0002539;1.56e-08;10!CL:0000136;1.65e-08;13!CL:0000057;2.26e-08;73!CL:0000723;9.08e-07;61 | ||
|ontology_enrichment_celltype_v019_2=CL:0000187,8.41e-26,55;CL:0000680,2.37e-24,58;CL:0000056,2.37e-24,58;CL:0000355,2.37e-24,58;CL:0000393,2.89e-22,61;CL:0000211,2.89e-22,61;CL:0000192,1.35e-21,43;CL:0000514,1.35e-21,43;CL:0000057,7.62e-21,76;CL:0000359,6.15e-19,32;CL:0000222,6.08e-14,121;CL:0000048,1.21e-13,427;CL:0000723,8.45e-13,433;CL:0000034,4.97e-12,441;CL:0002494,2.57e-11,16;CL:0000136,5.47e-09,15;CL:0002539,1.66e-08,10 | |||
|ontology_enrichment_development_v019=CL:0000514;1.18e-14;43!CL:0000355;1.77e-12;58 | |ontology_enrichment_development_v019=CL:0000514;1.18e-14;43!CL:0000355;1.77e-12;58 | ||
|ontology_enrichment_disease=DOID:2394!5.34e-08!14 | |ontology_enrichment_disease=DOID:2394!5.34e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;6.93e-09;14 | |ontology_enrichment_disease_v019=DOID:2394;6.93e-09;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,6.51e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.00e-21!83;UBERON:0002329!3.00e-21!83;UBERON:0003077!3.00e-21!83;UBERON:0003059!3.00e-21!83;UBERON:0007282!3.00e-21!83;UBERON:0009618!3.00e-21!83;UBERON:0007285!3.00e-21!83;UBERON:0001134!3.99e-21!61;UBERON:0002036!3.99e-21!61;UBERON:0003082!3.99e-21!61;UBERON:0004290!5.57e-21!70;UBERON:0002385!6.78e-21!63;UBERON:0001015!6.78e-21!63;UBERON:0000383!6.78e-21!63;UBERON:0005256!4.54e-18!143;UBERON:0000486!5.41e-16!82;UBERON:0002100!1.30e-13!216;UBERON:0000475!2.31e-13!365;UBERON:0004872!4.64e-13!84;UBERON:0000490!6.84e-13!138;UBERON:0002049!2.08e-11!79;UBERON:0007798!2.08e-11!79;UBERON:0003914!4.67e-11!118;UBERON:0004535!1.08e-10!110;UBERON:0000119!1.39e-10!312;UBERON:0000483!7.68e-10!309;UBERON:0001009!9.10e-10!113;UBERON:0001637!1.23e-09!42;UBERON:0003509!1.23e-09!42;UBERON:0004572!1.23e-09!42;UBERON:0000481!6.13e-09!347;UBERON:0004573!8.08e-09!33;UBERON:0004571!8.08e-09!33;UBERON:0001981!4.26e-08!60;UBERON:0007500!4.26e-08!60;UBERON:0004537!4.26e-08!60;UBERON:0006965!4.26e-08!60;UBERON:0001135!6.11e-08!15;UBERON:0003104!1.12e-07!238;UBERON:0009142!1.12e-07!238;UBERON:0000948!1.63e-07!24;UBERON:0005498!1.63e-07!24;UBERON:0004140!1.63e-07!24;UBERON:0009881!1.63e-07!24;UBERON:0004141!1.63e-07!24;UBERON:0003084!1.63e-07!24;UBERON:0007005!1.63e-07!24;UBERON:0004139!1.63e-07!24;UBERON:0004291!1.63e-07!24;UBERON:0002200!3.14e-07!11;UBERON:0006876!3.14e-07!11;UBERON:0004237!4.55e-07!10;UBERON:0004695!4.55e-07!10;UBERON:0002111!4.55e-07!10;UBERON:0004178!4.55e-07!10;UBERON:0000055!6.21e-07!69 | |ontology_enrichment_uberon=UBERON:0000914!3.00e-21!83;UBERON:0002329!3.00e-21!83;UBERON:0003077!3.00e-21!83;UBERON:0003059!3.00e-21!83;UBERON:0007282!3.00e-21!83;UBERON:0009618!3.00e-21!83;UBERON:0007285!3.00e-21!83;UBERON:0001134!3.99e-21!61;UBERON:0002036!3.99e-21!61;UBERON:0003082!3.99e-21!61;UBERON:0004290!5.57e-21!70;UBERON:0002385!6.78e-21!63;UBERON:0001015!6.78e-21!63;UBERON:0000383!6.78e-21!63;UBERON:0005256!4.54e-18!143;UBERON:0000486!5.41e-16!82;UBERON:0002100!1.30e-13!216;UBERON:0000475!2.31e-13!365;UBERON:0004872!4.64e-13!84;UBERON:0000490!6.84e-13!138;UBERON:0002049!2.08e-11!79;UBERON:0007798!2.08e-11!79;UBERON:0003914!4.67e-11!118;UBERON:0004535!1.08e-10!110;UBERON:0000119!1.39e-10!312;UBERON:0000483!7.68e-10!309;UBERON:0001009!9.10e-10!113;UBERON:0001637!1.23e-09!42;UBERON:0003509!1.23e-09!42;UBERON:0004572!1.23e-09!42;UBERON:0000481!6.13e-09!347;UBERON:0004573!8.08e-09!33;UBERON:0004571!8.08e-09!33;UBERON:0001981!4.26e-08!60;UBERON:0007500!4.26e-08!60;UBERON:0004537!4.26e-08!60;UBERON:0006965!4.26e-08!60;UBERON:0001135!6.11e-08!15;UBERON:0003104!1.12e-07!238;UBERON:0009142!1.12e-07!238;UBERON:0000948!1.63e-07!24;UBERON:0005498!1.63e-07!24;UBERON:0004140!1.63e-07!24;UBERON:0009881!1.63e-07!24;UBERON:0004141!1.63e-07!24;UBERON:0003084!1.63e-07!24;UBERON:0007005!1.63e-07!24;UBERON:0004139!1.63e-07!24;UBERON:0004291!1.63e-07!24;UBERON:0002200!3.14e-07!11;UBERON:0006876!3.14e-07!11;UBERON:0004237!4.55e-07!10;UBERON:0004695!4.55e-07!10;UBERON:0002111!4.55e-07!10;UBERON:0004178!4.55e-07!10;UBERON:0000055!6.21e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0002385;3.33e-10;31!UBERON:0001015;3.33e-10;31!UBERON:0000383;3.33e-10;31!UBERON:0004573;9.18e-09;33!UBERON:0004571;9.18e-09;33!UBERON:0006876;1.55e-08;11!UBERON:0004237;1.56e-08;10!UBERON:0004695;1.56e-08;10!UBERON:0002111;1.56e-08;10!UBERON:0004178;1.56e-08;10!UBERON:0001135;2.51e-08;15!UBERON:0001637;8.10e-08;42!UBERON:0003509;8.10e-08;42!UBERON:0004572;8.10e-08;42!UBERON:0000948;1.08e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0002385;3.33e-10;31!UBERON:0001015;3.33e-10;31!UBERON:0000383;3.33e-10;31!UBERON:0004573;9.18e-09;33!UBERON:0004571;9.18e-09;33!UBERON:0006876;1.55e-08;11!UBERON:0004237;1.56e-08;10!UBERON:0004695;1.56e-08;10!UBERON:0002111;1.56e-08;10!UBERON:0004178;1.56e-08;10!UBERON:0001135;2.51e-08;15!UBERON:0001637;8.10e-08;42!UBERON:0003509;8.10e-08;42!UBERON:0004572;8.10e-08;42!UBERON:0000948;1.08e-07;22 | ||
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| ||
|short_description=p4@ADAMTS12 | |short_description=p4@ADAMTS12 | ||
}} | }} |
Latest revision as of 17:03, 17 September 2015
Short description: | p4@ADAMTS12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ADAMTS12_5end |
Coexpression cluster: | C1960_Mesenchymal_Smooth_cholangiocellular_hepatic_bile_Fibroblast_mesenchymal |
Association with transcript: | -43bp_to_ENST00000515401, NM_030955, uc003jia.1, uc003jib.1, uc010iuq.1_5end |
EntrezGene: | ADAMTS12 |
HGNC: | 14605 |
UniProt: | D6REX0P58397 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 8.41e-26 | 55 |
muscle precursor cell | 2.37e-24 | 58 |
myoblast | 2.37e-24 | 58 |
multi-potent skeletal muscle stem cell | 2.37e-24 | 58 |
electrically responsive cell | 2.89e-22 | 61 |
electrically active cell | 2.89e-22 | 61 |
smooth muscle cell | 1.35e-21 | 43 |
smooth muscle myoblast | 1.35e-21 | 43 |
fibroblast | 7.62e-21 | 76 |
vascular associated smooth muscle cell | 6.15e-19 | 32 |
mesodermal cell | 6.08e-14 | 121 |
multi fate stem cell | 1.21e-13 | 427 |
somatic stem cell | 8.45e-13 | 433 |
stem cell | 4.97e-12 | 441 |
cardiocyte | 2.57e-11 | 16 |
fat cell | 5.47e-09 | 15 |
aortic smooth muscle cell | 1.66e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.51e-09 | 14 |