FFCP PHASE1:Hg19::chr2:67753505..67753511,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:67753505..67753511,- | |||
|coexpression_cluster_id=C1718 | |coexpression_cluster_id=C1718 | ||
|description=CAGE_peak_at_chr2:67753505..67753511,- | |description=CAGE_peak_at_chr2:67753505..67753511,- | ||
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|ontology_enrichment_celltype=CL:0000569!2.56e-11!4;CL:0000011!2.56e-11!4;CL:0000680!1.03e-08!57;CL:0000056!1.03e-08!57;CL:0000355!1.03e-08!57;CL:0000359!2.54e-08!32;CL:0000222!4.17e-08!119;CL:0000192!7.20e-08!42;CL:0000514!7.20e-08!42;CL:0000187!2.85e-07!54;CL:0002494!4.66e-07!16 | |ontology_enrichment_celltype=CL:0000569!2.56e-11!4;CL:0000011!2.56e-11!4;CL:0000680!1.03e-08!57;CL:0000056!1.03e-08!57;CL:0000355!1.03e-08!57;CL:0000359!2.54e-08!32;CL:0000222!4.17e-08!119;CL:0000192!7.20e-08!42;CL:0000514!7.20e-08!42;CL:0000187!2.85e-07!54;CL:0002494!4.66e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000569;4.64e-26;4!CL:0002494;7.87e-14;16!CL:0002593;5.52e-13;2!CL:0002595;1.82e-11;5!CL:0000134;9.28e-11;55!CL:0000048;1.61e-10;58!CL:0000359;1.76e-10;32!CL:0000723;1.66e-09;61!CL:0002592;2.81e-09;3!CL:0000214;5.97e-09;3!CL:0000511;8.26e-08;1!CL:0002625;8.26e-08;1!CL:0000216;8.26e-08;1 | |ontology_enrichment_celltype_v019=CL:0000569;4.64e-26;4!CL:0002494;7.87e-14;16!CL:0002593;5.52e-13;2!CL:0002595;1.82e-11;5!CL:0000134;9.28e-11;55!CL:0000048;1.61e-10;58!CL:0000359;1.76e-10;32!CL:0000723;1.66e-09;61!CL:0002592;2.81e-09;3!CL:0000214;5.97e-09;3!CL:0000511;8.26e-08;1!CL:0002625;8.26e-08;1!CL:0000216;8.26e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000569,4.51e-26,4;CL:0000011,4.51e-26,4;CL:0002494,9.01e-14,16;CL:0002593,5.20e-13,2;CL:0002595,2.00e-11,5;CL:0000359,6.12e-11,32;CL:0002592,3.67e-09,3;CL:0000214,7.30e-09,3;CL:0000192,7.57e-08,43;CL:0000514,7.57e-08,43;CL:0000511,8.00e-08,1;CL:0002625,8.00e-08,1;CL:0000216,8.00e-08,1;CL:0000222,5.77e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000011;4.64e-26;4!UBERON:0003124;1.10e-07;1!UBERON:0001045;3.50e-07;1 | |ontology_enrichment_development_v019=CL:0000011;4.64e-26;4!UBERON:0003124;1.10e-07;1!UBERON:0001045;3.50e-07;1 | ||
|ontology_enrichment_disease_v019=DOID:2394;9.11e-34;14!DOID:120;8.09e-17;27!DOID:193;1.47e-15;29 | |ontology_enrichment_disease_v019=DOID:2394;9.11e-34;14!DOID:120;8.09e-17;27!DOID:193;1.47e-15;29 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,6.57e-34,14;DOID:120,6.87e-17,27;DOID:193,1.27e-15,29 | |||
|ontology_enrichment_uberon=UBERON:0004872!6.79e-15!84;UBERON:0000992!5.25e-14!13;UBERON:0000948!4.37e-12!24;UBERON:0005498!4.37e-12!24;UBERON:0004140!4.37e-12!24;UBERON:0009881!4.37e-12!24;UBERON:0004141!4.37e-12!24;UBERON:0003084!4.37e-12!24;UBERON:0007005!4.37e-12!24;UBERON:0004139!4.37e-12!24;UBERON:0004291!4.37e-12!24;UBERON:0002119!9.69e-11!4;UBERON:0004531!9.69e-11!4;UBERON:0007100!2.05e-10!27;UBERON:0000991!5.88e-10!21;UBERON:0009196!5.88e-10!21;UBERON:0009117!5.88e-10!21;UBERON:0005564!5.88e-10!21;UBERON:0000055!8.36e-10!69;UBERON:0002385!1.90e-09!63;UBERON:0001015!1.90e-09!63;UBERON:0000383!1.90e-09!63;UBERON:0004176!2.12e-09!22;UBERON:0004535!8.29e-09!110;UBERON:0001009!2.14e-08!113;UBERON:0001981!2.56e-08!60;UBERON:0007500!2.56e-08!60;UBERON:0004537!2.56e-08!60;UBERON:0006965!2.56e-08!60;UBERON:0002118!2.66e-08!5;UBERON:0004532!2.66e-08!5;UBERON:0004573!3.91e-08!33;UBERON:0004571!3.91e-08!33;UBERON:0002049!6.73e-08!79;UBERON:0007798!6.73e-08!79;UBERON:0001134!7.42e-08!61;UBERON:0002036!7.42e-08!61;UBERON:0003082!7.42e-08!61;UBERON:0000926!8.43e-08!448;UBERON:0004120!8.43e-08!448;UBERON:0006603!8.43e-08!448;UBERON:0003914!1.23e-07!118;UBERON:0004458!2.17e-07!49;UBERON:0003978!2.71e-07!3;UBERON:0009751!2.71e-07!3;UBERON:0000946!2.71e-07!3;UBERON:0002523!2.71e-07!3;UBERON:0005983!2.71e-07!3;UBERON:0002165!2.71e-07!3;UBERON:0002062!2.71e-07!3;UBERON:0007280!2.71e-07!3;UBERON:0001637!7.12e-07!42;UBERON:0003509!7.12e-07!42;UBERON:0004572!7.12e-07!42;UBERON:0003134!7.71e-07!37;UBERON:0000474!7.71e-07!37 | |ontology_enrichment_uberon=UBERON:0004872!6.79e-15!84;UBERON:0000992!5.25e-14!13;UBERON:0000948!4.37e-12!24;UBERON:0005498!4.37e-12!24;UBERON:0004140!4.37e-12!24;UBERON:0009881!4.37e-12!24;UBERON:0004141!4.37e-12!24;UBERON:0003084!4.37e-12!24;UBERON:0007005!4.37e-12!24;UBERON:0004139!4.37e-12!24;UBERON:0004291!4.37e-12!24;UBERON:0002119!9.69e-11!4;UBERON:0004531!9.69e-11!4;UBERON:0007100!2.05e-10!27;UBERON:0000991!5.88e-10!21;UBERON:0009196!5.88e-10!21;UBERON:0009117!5.88e-10!21;UBERON:0005564!5.88e-10!21;UBERON:0000055!8.36e-10!69;UBERON:0002385!1.90e-09!63;UBERON:0001015!1.90e-09!63;UBERON:0000383!1.90e-09!63;UBERON:0004176!2.12e-09!22;UBERON:0004535!8.29e-09!110;UBERON:0001009!2.14e-08!113;UBERON:0001981!2.56e-08!60;UBERON:0007500!2.56e-08!60;UBERON:0004537!2.56e-08!60;UBERON:0006965!2.56e-08!60;UBERON:0002118!2.66e-08!5;UBERON:0004532!2.66e-08!5;UBERON:0004573!3.91e-08!33;UBERON:0004571!3.91e-08!33;UBERON:0002049!6.73e-08!79;UBERON:0007798!6.73e-08!79;UBERON:0001134!7.42e-08!61;UBERON:0002036!7.42e-08!61;UBERON:0003082!7.42e-08!61;UBERON:0000926!8.43e-08!448;UBERON:0004120!8.43e-08!448;UBERON:0006603!8.43e-08!448;UBERON:0003914!1.23e-07!118;UBERON:0004458!2.17e-07!49;UBERON:0003978!2.71e-07!3;UBERON:0009751!2.71e-07!3;UBERON:0000946!2.71e-07!3;UBERON:0002523!2.71e-07!3;UBERON:0005983!2.71e-07!3;UBERON:0002165!2.71e-07!3;UBERON:0002062!2.71e-07!3;UBERON:0007280!2.71e-07!3;UBERON:0001637!7.12e-07!42;UBERON:0003509!7.12e-07!42;UBERON:0004572!7.12e-07!42;UBERON:0003134!7.71e-07!37;UBERON:0000474!7.71e-07!37 | ||
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|short_description=p@chr2:67753505..67753511,- | |short_description=p@chr2:67753505..67753511,- | ||
}} | }} |
Latest revision as of 11:34, 29 July 2015
Short description: | p@chr2:67753505..67753511, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:67753505..67753511, - |
Coexpression cluster: | C1718_mesenchymal_Sertoli_Fibroblast_Mesothelial_Mesenchymal_placenta_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 4.51e-26 | 4 |
migratory trunk neural crest cell | 4.51e-26 | 4 |
cardiocyte | 9.01e-14 | 16 |
smooth muscle cell of the internal thoracic artery | 5.20e-13 | 2 |
smooth muscle cell of the subclavian artery | 2.00e-11 | 5 |
vascular associated smooth muscle cell | 6.12e-11 | 32 |
smooth muscle cell of the coronary artery | 3.67e-09 | 3 |
synovial cell | 7.30e-09 | 3 |
smooth muscle cell | 7.57e-08 | 43 |
smooth muscle myoblast | 7.57e-08 | 43 |
androgen binding protein secreting cell | 8.00e-08 | 1 |
seminiferous tubule epithelial cell | 8.00e-08 | 1 |
Sertoli cell | 8.00e-08 | 1 |
mesodermal cell | 5.77e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.57e-34 | 14 |
female reproductive organ cancer | 6.87e-17 | 27 |
reproductive organ cancer | 1.27e-15 | 29 |