FFCP PHASE1:Hg19::chr5:149865838..149865891,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3340 | |EntrezGene=3340 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7680 | |HGNC=7680 | ||
|TSSclassifier=strong | |||
|UniProt=E5RG58 | |UniProt=E5RG58 | ||
|association_with_transcript=0bp_to_ENST00000519157_5end | |association_with_transcript=0bp_to_ENST00000519157_5end | ||
|cluster_id=chr5:149865838..149865891,+ | |||
|description=CAGE_peak_5_at_NDST1_5end | |description=CAGE_peak_5_at_NDST1_5end | ||
|id=chr5:149865838..149865891,+ | |id=chr5:149865838..149865891,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.99e-20!180;CL:0000220!2.92e-14!246;CL:0002321!4.38e-14!248;CL:0002371!3.70e-13!591;CL:0000057!1.74e-12!75;CL:0000183!6.85e-11!59;CL:0000144!1.32e-10!625;CL:0000222!1.21e-09!119;CL:0000680!2.81e-09!57;CL:0000056!2.81e-09!57;CL:0000355!2.81e-09!57;CL:0000187!3.85e-09!54;CL:0000192!4.25e-08!42;CL:0000514!4.25e-08!42;CL:0000359!5.01e-07!32;CL:0000393!8.32e-07!60;CL:0000211!8.32e-07!60 | |ontology_enrichment_celltype=CL:0000055!2.99e-20!180;CL:0000220!2.92e-14!246;CL:0002321!4.38e-14!248;CL:0002371!3.70e-13!591;CL:0000057!1.74e-12!75;CL:0000183!6.85e-11!59;CL:0000144!1.32e-10!625;CL:0000222!1.21e-09!119;CL:0000680!2.81e-09!57;CL:0000056!2.81e-09!57;CL:0000355!2.81e-09!57;CL:0000187!3.85e-09!54;CL:0000192!4.25e-08!42;CL:0000514!4.25e-08!42;CL:0000359!5.01e-07!32;CL:0000393!8.32e-07!60;CL:0000211!8.32e-07!60 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.25e-13,250;CL:0000057,1.22e-12,76;CL:0000222,1.47e-09,121;CL:0000680,7.28e-09,58;CL:0000056,7.28e-09,58;CL:0000355,7.28e-09,58;CL:0000187,1.03e-08,55;CL:0000192,1.64e-07,43;CL:0000514,1.64e-07,43;CL:0000359,3.96e-07,32;CL:0002620,8.86e-07,23 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.69e-19!365;UBERON:0000468!1.10e-14!659;UBERON:0000467!5.32e-14!625;UBERON:0000480!9.90e-14!626;UBERON:0000119!1.15e-12!312;UBERON:0000483!2.07e-12!309;UBERON:0000914!2.48e-12!83;UBERON:0002329!2.48e-12!83;UBERON:0003077!2.48e-12!83;UBERON:0003059!2.48e-12!83;UBERON:0007282!2.48e-12!83;UBERON:0009618!2.48e-12!83;UBERON:0007285!2.48e-12!83;UBERON:0003102!2.90e-12!95;UBERON:0000486!3.28e-12!82;UBERON:0005256!7.44e-12!143;UBERON:0000481!1.15e-11!347;UBERON:0002100!5.53e-11!216;UBERON:0004290!2.00e-10!70;UBERON:0002049!4.64e-10!79;UBERON:0007798!4.64e-10!79;UBERON:0004872!1.10e-09!84;UBERON:0000923!2.89e-09!604;UBERON:0005291!2.89e-09!604;UBERON:0006598!2.89e-09!604;UBERON:0002532!2.89e-09!604;UBERON:0002050!3.00e-09!605;UBERON:0005423!3.00e-09!605;UBERON:0000922!4.75e-09!612;UBERON:0003914!5.61e-09!118;UBERON:0001134!1.37e-08!61;UBERON:0002036!1.37e-08!61;UBERON:0003082!1.37e-08!61;UBERON:0002385!1.75e-08!63;UBERON:0001015!1.75e-08!63;UBERON:0000383!1.75e-08!63;UBERON:0001981!2.27e-08!60;UBERON:0007500!2.27e-08!60;UBERON:0004537!2.27e-08!60;UBERON:0006965!2.27e-08!60;UBERON:0003104!4.26e-08!238;UBERON:0009142!4.26e-08!238;UBERON:0000477!4.34e-08!286;UBERON:0000055!6.90e-08!69;UBERON:0001444!8.46e-08!48;UBERON:0002199!9.60e-08!45;UBERON:0002416!9.60e-08!45;UBERON:0000479!1.14e-07!787;UBERON:0004111!1.26e-07!241;UBERON:0002097!1.92e-07!40;UBERON:0001009!4.26e-07!113 | |ontology_enrichment_uberon=UBERON:0000475!2.69e-19!365;UBERON:0000468!1.10e-14!659;UBERON:0000467!5.32e-14!625;UBERON:0000480!9.90e-14!626;UBERON:0000119!1.15e-12!312;UBERON:0000483!2.07e-12!309;UBERON:0000914!2.48e-12!83;UBERON:0002329!2.48e-12!83;UBERON:0003077!2.48e-12!83;UBERON:0003059!2.48e-12!83;UBERON:0007282!2.48e-12!83;UBERON:0009618!2.48e-12!83;UBERON:0007285!2.48e-12!83;UBERON:0003102!2.90e-12!95;UBERON:0000486!3.28e-12!82;UBERON:0005256!7.44e-12!143;UBERON:0000481!1.15e-11!347;UBERON:0002100!5.53e-11!216;UBERON:0004290!2.00e-10!70;UBERON:0002049!4.64e-10!79;UBERON:0007798!4.64e-10!79;UBERON:0004872!1.10e-09!84;UBERON:0000923!2.89e-09!604;UBERON:0005291!2.89e-09!604;UBERON:0006598!2.89e-09!604;UBERON:0002532!2.89e-09!604;UBERON:0002050!3.00e-09!605;UBERON:0005423!3.00e-09!605;UBERON:0000922!4.75e-09!612;UBERON:0003914!5.61e-09!118;UBERON:0001134!1.37e-08!61;UBERON:0002036!1.37e-08!61;UBERON:0003082!1.37e-08!61;UBERON:0002385!1.75e-08!63;UBERON:0001015!1.75e-08!63;UBERON:0000383!1.75e-08!63;UBERON:0001981!2.27e-08!60;UBERON:0007500!2.27e-08!60;UBERON:0004537!2.27e-08!60;UBERON:0006965!2.27e-08!60;UBERON:0003104!4.26e-08!238;UBERON:0009142!4.26e-08!238;UBERON:0000477!4.34e-08!286;UBERON:0000055!6.90e-08!69;UBERON:0001444!8.46e-08!48;UBERON:0002199!9.60e-08!45;UBERON:0002416!9.60e-08!45;UBERON:0000479!1.14e-07!787;UBERON:0004111!1.26e-07!241;UBERON:0002097!1.92e-07!40;UBERON:0001009!4.26e-07!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;7.53e-07;41 | |ontology_enrichment_uberon_v019=UBERON:0002097;7.53e-07;41 | ||
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| ||
|short_description=p5@NDST1 | |short_description=p5@NDST1 | ||
}} | }} |
Latest revision as of 05:04, 16 September 2015
Short description: | p5@NDST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NDST1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000519157_5end |
EntrezGene: | NDST1 |
HGNC: | 7680 |
UniProt: | E5RG58 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.25e-13 | 250 |
fibroblast | 1.22e-12 | 76 |
mesodermal cell | 1.47e-09 | 121 |
muscle precursor cell | 7.28e-09 | 58 |
myoblast | 7.28e-09 | 58 |
multi-potent skeletal muscle stem cell | 7.28e-09 | 58 |
muscle cell | 1.03e-08 | 55 |
smooth muscle cell | 1.64e-07 | 43 |
smooth muscle myoblast | 1.64e-07 | 43 |
vascular associated smooth muscle cell | 3.96e-07 | 32 |
skin fibroblast | 8.86e-07 | 23 |