FFCP PHASE1:Hg19::chr9:140513231..140513337,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85026 | |EntrezGene=85026 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23395 | |HGNC=23395 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H2J1 | |UniProt=Q9H2J1 | ||
|association_with_transcript=0bp_to_ENST00000371417,NM_032937,uc004cnz.2_5end | |association_with_transcript=0bp_to_ENST00000371417,NM_032937,uc004cnz.2_5end | ||
|cluster_id=chr9:140513231..140513337,- | |||
|description=CAGE_peak_1_at_C9orf37_5end | |description=CAGE_peak_1_at_C9orf37_5end | ||
|id=chr9:140513231..140513337,- | |id=chr9:140513231..140513337,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!3.34e-13!86;UBERON:0000073!9.47e-13!94;UBERON:0001016!9.47e-13!94;UBERON:0001017!1.44e-12!82;UBERON:0003075!1.13e-10!86;UBERON:0007284!1.13e-10!86;UBERON:0000955!1.61e-10!69;UBERON:0006238!1.61e-10!69;UBERON:0003056!4.23e-10!61;UBERON:0000119!5.95e-10!312;UBERON:0002346!6.98e-10!90;UBERON:0001049!7.29e-10!57;UBERON:0005068!7.29e-10!57;UBERON:0006241!7.29e-10!57;UBERON:0007135!7.29e-10!57;UBERON:0002616!1.59e-09!59;UBERON:0000483!1.88e-09!309;UBERON:0000153!2.19e-09!129;UBERON:0007811!2.19e-09!129;UBERON:0000033!3.10e-09!123;UBERON:0004121!2.05e-08!169;UBERON:0000475!2.94e-08!365;UBERON:0002780!3.60e-08!41;UBERON:0001890!3.60e-08!41;UBERON:0006240!3.60e-08!41;UBERON:0000481!4.97e-08!347;UBERON:0000924!5.31e-08!173;UBERON:0006601!5.31e-08!173;UBERON:0003080!5.33e-08!42;UBERON:0000477!3.89e-07!286;UBERON:0007023!4.74e-07!115;UBERON:0000025!7.28e-07!194;UBERON:0004111!9.06e-07!241 | |ontology_enrichment_uberon=UBERON:0005743!3.34e-13!86;UBERON:0000073!9.47e-13!94;UBERON:0001016!9.47e-13!94;UBERON:0001017!1.44e-12!82;UBERON:0003075!1.13e-10!86;UBERON:0007284!1.13e-10!86;UBERON:0000955!1.61e-10!69;UBERON:0006238!1.61e-10!69;UBERON:0003056!4.23e-10!61;UBERON:0000119!5.95e-10!312;UBERON:0002346!6.98e-10!90;UBERON:0001049!7.29e-10!57;UBERON:0005068!7.29e-10!57;UBERON:0006241!7.29e-10!57;UBERON:0007135!7.29e-10!57;UBERON:0002616!1.59e-09!59;UBERON:0000483!1.88e-09!309;UBERON:0000153!2.19e-09!129;UBERON:0007811!2.19e-09!129;UBERON:0000033!3.10e-09!123;UBERON:0004121!2.05e-08!169;UBERON:0000475!2.94e-08!365;UBERON:0002780!3.60e-08!41;UBERON:0001890!3.60e-08!41;UBERON:0006240!3.60e-08!41;UBERON:0000481!4.97e-08!347;UBERON:0000924!5.31e-08!173;UBERON:0006601!5.31e-08!173;UBERON:0003080!5.33e-08!42;UBERON:0000477!3.89e-07!286;UBERON:0007023!4.74e-07!115;UBERON:0000025!7.28e-07!194;UBERON:0004111!9.06e-07!241 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003075,8.75e-13,82;UBERON:0007284,8.75e-13,82;UBERON:0001017,1.04e-12,81;UBERON:0001016,3.06e-12,89;UBERON:0002346,7.85e-12,86;UBERON:0000119,9.54e-11,309;UBERON:0003056,1.07e-10,61;UBERON:0000955,1.17e-10,68;UBERON:0006238,1.17e-10,68;UBERON:0000483,3.16e-10,306;UBERON:0001049,5.06e-10,56;UBERON:0005068,5.06e-10,56;UBERON:0006241,5.06e-10,56;UBERON:0007135,5.06e-10,56;UBERON:0010314,5.61e-10,132;UBERON:0000073,5.93e-10,53;UBERON:0002616,5.93e-10,53;UBERON:0011216,1.27e-08,223;UBERON:0004121,2.18e-08,171;UBERON:0000924,2.18e-08,171;UBERON:0006601,2.18e-08,171;UBERON:0010371,3.14e-08,104;UBERON:0002780,3.60e-08,41;UBERON:0001890,3.60e-08,41;UBERON:0003080,3.60e-08,41;UBERON:0006240,3.60e-08,41;UBERON:0000025,3.49e-07,192;UBERON:0004111,5.20e-07,240;UBERON:0007023,8.27e-07,114 | |||
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| ||
|short_description=p1@C9orf37 | |short_description=p1@C9orf37 | ||
}} | }} |
Latest revision as of 17:39, 16 September 2015
Short description: | p1@C9orf37 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C9orf37_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000371417, NM_032937, uc004cnz.2_5end |
EntrezGene: | C9orf37 |
HGNC: | 23395 |
UniProt: | Q9H2J1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural plate | 8.75e-13 | 82 |
presumptive neural plate | 8.75e-13 | 82 |
central nervous system | 1.04e-12 | 81 |
nervous system | 3.06e-12 | 89 |
neurectoderm | 7.85e-12 | 86 |
cell layer | 9.54e-11 | 309 |
pre-chordal neural plate | 1.07e-10 | 61 |
brain | 1.17e-10 | 68 |
future brain | 1.17e-10 | 68 |
epithelium | 3.16e-10 | 306 |
neural tube | 5.06e-10 | 56 |
neural rod | 5.06e-10 | 56 |
future spinal cord | 5.06e-10 | 56 |
neural keel | 5.06e-10 | 56 |
structure with developmental contribution from neural crest | 5.61e-10 | 132 |
regional part of nervous system | 5.93e-10 | 53 |
regional part of brain | 5.93e-10 | 53 |
organ system subdivision | 1.27e-08 | 223 |
ectoderm-derived structure | 2.18e-08 | 171 |
ectoderm | 2.18e-08 | 171 |
presumptive ectoderm | 2.18e-08 | 171 |
ecto-epithelium | 3.14e-08 | 104 |
regional part of forebrain | 3.60e-08 | 41 |
forebrain | 3.60e-08 | 41 |
anterior neural tube | 3.60e-08 | 41 |
future forebrain | 3.60e-08 | 41 |
tube | 3.49e-07 | 192 |
anatomical conduit | 5.20e-07 | 240 |
adult organism | 8.27e-07 | 114 |