FFCP PHASE1:Hg19::chr4:144257996..144258009,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2549 | |EntrezGene=2549 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4066 | |HGNC=4066 | ||
|TSSclassifier=strong | |||
|UniProt=Q13480,Q9HA84 | |UniProt=Q13480,Q9HA84 | ||
|association_with_transcript=13bp_to_NM_002039,NM_207123,uc003ijd.2,uc003ije.2_5end | |association_with_transcript=13bp_to_NM_002039,NM_207123,uc003ijd.2,uc003ije.2_5end | ||
|cluster_id=chr4:144257996..144258009,+ | |||
|coexpression_cluster_id=C1518 | |coexpression_cluster_id=C1518 | ||
|description=CAGE_peak_6_at_GAB1_5end | |description=CAGE_peak_6_at_GAB1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!1.18e-07!24;CL:0000826!1.18e-07!24 | |ontology_enrichment_celltype=CL:0000945!1.18e-07!24;CL:0000826!1.18e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000945;9.29e-11;24!CL:0000236;7.07e-09;13!CL:0000094;2.39e-08;8 | |ontology_enrichment_celltype_v019=CL:0000945;9.29e-11;24!CL:0000236;7.07e-09;13!CL:0000094;2.39e-08;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.59e-11,24;CL:0000826,5.59e-11,24;CL:0000236,3.90e-10,14;CL:0000094,3.10e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.25e-08;82 | |ontology_enrichment_development_v019=UBERON:0006601;2.25e-08;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.49e-36!115;UBERON:0001049!1.47e-21!57;UBERON:0005068!1.47e-21!57;UBERON:0006241!1.47e-21!57;UBERON:0007135!1.47e-21!57;UBERON:0003080!4.07e-19!42;UBERON:0002780!5.26e-19!41;UBERON:0001890!5.26e-19!41;UBERON:0006240!5.26e-19!41;UBERON:0001017!1.53e-17!82;UBERON:0005743!5.08e-17!86;UBERON:0001893!7.11e-17!34;UBERON:0002020!9.12e-17!34;UBERON:0003528!9.12e-17!34;UBERON:0002616!1.71e-16!59;UBERON:0002791!2.57e-16!33;UBERON:0001869!1.41e-15!32;UBERON:0000955!5.36e-15!69;UBERON:0006238!5.36e-15!69;UBERON:0000073!3.40e-14!94;UBERON:0001016!3.40e-14!94;UBERON:0003075!7.22e-14!86;UBERON:0007284!7.22e-14!86;UBERON:0002346!7.65e-13!90;UBERON:0000956!6.64e-12!25;UBERON:0000203!6.64e-12!25;UBERON:0003056!1.76e-11!61;UBERON:0002619!7.67e-11!22;UBERON:0001950!6.67e-10!20;UBERON:0000033!2.19e-07!123;UBERON:0000153!4.56e-07!129;UBERON:0007811!4.56e-07!129;UBERON:0004121!6.25e-07!169 | |ontology_enrichment_uberon=UBERON:0007023!3.49e-36!115;UBERON:0001049!1.47e-21!57;UBERON:0005068!1.47e-21!57;UBERON:0006241!1.47e-21!57;UBERON:0007135!1.47e-21!57;UBERON:0003080!4.07e-19!42;UBERON:0002780!5.26e-19!41;UBERON:0001890!5.26e-19!41;UBERON:0006240!5.26e-19!41;UBERON:0001017!1.53e-17!82;UBERON:0005743!5.08e-17!86;UBERON:0001893!7.11e-17!34;UBERON:0002020!9.12e-17!34;UBERON:0003528!9.12e-17!34;UBERON:0002616!1.71e-16!59;UBERON:0002791!2.57e-16!33;UBERON:0001869!1.41e-15!32;UBERON:0000955!5.36e-15!69;UBERON:0006238!5.36e-15!69;UBERON:0000073!3.40e-14!94;UBERON:0001016!3.40e-14!94;UBERON:0003075!7.22e-14!86;UBERON:0007284!7.22e-14!86;UBERON:0002346!7.65e-13!90;UBERON:0000956!6.64e-12!25;UBERON:0000203!6.64e-12!25;UBERON:0003056!1.76e-11!61;UBERON:0002619!7.67e-11!22;UBERON:0001950!6.67e-10!20;UBERON:0000033!2.19e-07!123;UBERON:0000153!4.56e-07!129;UBERON:0007811!4.56e-07!129;UBERON:0004121!6.25e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;6.89e-24;34!UBERON:0003528;5.14e-23;34!UBERON:0002020;5.14e-23;34!UBERON:0002791;1.08e-22;32!UBERON:0001869;1.13e-22;32!UBERON:0002780;1.52e-21;41!UBERON:0001890;1.52e-21;41!UBERON:0000956;3.23e-18;25!UBERON:0000203;3.23e-18;25!UBERON:0002619;2.11e-17;22!UBERON:0000073;2.73e-17;53!UBERON:0002616;2.73e-17;53!UBERON:0001950;7.18e-16;20!UBERON:0001017;5.52e-11;75!UBERON:0007023;1.59e-10;114!UBERON:0000125;1.93e-10;9!UBERON:0002308;1.93e-10;9!UBERON:0000955;2.39e-10;68!UBERON:0002420;5.32e-10;9!UBERON:0007245;5.32e-10;9!UBERON:0010009;5.32e-10;9!UBERON:0010011;5.32e-10;9!UBERON:0000454;5.32e-10;9!UBERON:0001016;4.41e-09;83!UBERON:0002298;2.52e-08;6!UBERON:0009663;2.67e-08;7!UBERON:0001871;8.71e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0001893;6.89e-24;34!UBERON:0003528;5.14e-23;34!UBERON:0002020;5.14e-23;34!UBERON:0002791;1.08e-22;32!UBERON:0001869;1.13e-22;32!UBERON:0002780;1.52e-21;41!UBERON:0001890;1.52e-21;41!UBERON:0000956;3.23e-18;25!UBERON:0000203;3.23e-18;25!UBERON:0002619;2.11e-17;22!UBERON:0000073;2.73e-17;53!UBERON:0002616;2.73e-17;53!UBERON:0001950;7.18e-16;20!UBERON:0001017;5.52e-11;75!UBERON:0007023;1.59e-10;114!UBERON:0000125;1.93e-10;9!UBERON:0002308;1.93e-10;9!UBERON:0000955;2.39e-10;68!UBERON:0002420;5.32e-10;9!UBERON:0007245;5.32e-10;9!UBERON:0010009;5.32e-10;9!UBERON:0010011;5.32e-10;9!UBERON:0000454;5.32e-10;9!UBERON:0001016;4.41e-09;83!UBERON:0002298;2.52e-08;6!UBERON:0009663;2.67e-08;7!UBERON:0001871;8.71e-07;6 | ||
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| ||
|short_description=p6@GAB1 | |short_description=p6@GAB1 | ||
}} | }} |
Latest revision as of 21:34, 15 September 2015
Short description: | p6@GAB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GAB1_5end |
Coexpression cluster: | C1518_non_optic_corpus_thalamus_globus_substantia_medulla |
Association with transcript: | 13bp_to_NM_002039, NM_207123, uc003ijd.2, uc003ije.2_5end |
EntrezGene: | GAB1 |
HGNC: | 4066 |
UniProt: | Q13480Q9HA84 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.59e-11 | 24 |
pro-B cell | 5.59e-11 | 24 |
B cell | 3.90e-10 | 14 |
granulocyte | 3.10e-08 | 8 |