FFCP PHASE1:Hg19::chr6:109777078..109777102,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64780 | |EntrezGene=64780 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20619 | |HGNC=20619 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TDZ2 | |UniProt=Q8TDZ2 | ||
|association_with_transcript=87bp_to_ENST00000358577,ENST00000358807,NM_001159291,NM_022765,uc003ptk.2,uc010kdr.2_5end | |association_with_transcript=87bp_to_ENST00000358577,ENST00000358807,NM_001159291,NM_022765,uc003ptk.2,uc010kdr.2_5end | ||
|cluster_id=chr6:109777078..109777102,- | |||
|description=CAGE_peak_2_at_MICAL1_5end | |description=CAGE_peak_2_at_MICAL1_5end | ||
|id=chr6:109777078..109777102,- | |id=chr6:109777078..109777102,- | ||
|ontology_enrichment_celltype=CL:0000738!1.86e-40!140;CL:0000037!2.94e-33!172;CL:0000566!2.94e-33!172;CL:0002087!5.29e-33!119;CL:0000988!1.09e-31!182;CL:0002032!7.36e-31!165;CL:0000837!7.36e-31!165;CL:0002031!8.91e-31!124;CL:0000766!9.21e-31!76;CL:0000557!3.76e-29!71;CL:0002009!5.79e-29!65;CL:0002194!1.15e-27!63;CL:0000576!1.15e-27!63;CL:0000040!1.15e-27!63;CL:0000559!1.15e-27!63;CL:0000839!6.06e-25!70;CL:0002057!1.00e-24!42;CL:0000763!5.05e-24!112;CL:0000049!5.05e-24!112;CL:0000860!4.83e-21!45;CL:0000451!1.54e-07!10;CL:0000990!6.70e-07!8;CL:0002393!7.11e-07!9;CL:0002397!7.11e-07!9;CL:0000542!8.50e-07!53;CL:0000051!8.50e-07!53;CL:0000219!8.74e-07!390 | |ontology_enrichment_celltype=CL:0000738!1.86e-40!140;CL:0000037!2.94e-33!172;CL:0000566!2.94e-33!172;CL:0002087!5.29e-33!119;CL:0000988!1.09e-31!182;CL:0002032!7.36e-31!165;CL:0000837!7.36e-31!165;CL:0002031!8.91e-31!124;CL:0000766!9.21e-31!76;CL:0000557!3.76e-29!71;CL:0002009!5.79e-29!65;CL:0002194!1.15e-27!63;CL:0000576!1.15e-27!63;CL:0000040!1.15e-27!63;CL:0000559!1.15e-27!63;CL:0000839!6.06e-25!70;CL:0002057!1.00e-24!42;CL:0000763!5.05e-24!112;CL:0000049!5.05e-24!112;CL:0000860!4.83e-21!45;CL:0000451!1.54e-07!10;CL:0000990!6.70e-07!8;CL:0002393!7.11e-07!9;CL:0002397!7.11e-07!9;CL:0000542!8.50e-07!53;CL:0000051!8.50e-07!53;CL:0000219!8.74e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000473;9.59e-19;39!CL:0000234;9.59e-19;39!CL:0000860;1.70e-18;33!CL:0002057;1.70e-18;33!CL:0000576;1.92e-18;48!CL:0000766;2.29e-15;69!CL:0002087;1.93e-10;104!CL:0000738;2.39e-10;136!CL:0000763;1.98e-08;100!CL:0000451;7.44e-08;10!CL:0000990;3.56e-07;8 | |ontology_enrichment_celltype_v019=CL:0000473;9.59e-19;39!CL:0000234;9.59e-19;39!CL:0000860;1.70e-18;33!CL:0002057;1.70e-18;33!CL:0000576;1.92e-18;48!CL:0000766;2.29e-15;69!CL:0002087;1.93e-10;104!CL:0000738;2.39e-10;136!CL:0000763;1.98e-08;100!CL:0000451;7.44e-08;10!CL:0000990;3.56e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.19e-45,136;CL:0000037,2.42e-37,168;CL:0002087,5.07e-37,115;CL:0000766,3.16e-36,72;CL:0000988,4.30e-36,177;CL:0002032,8.84e-35,161;CL:0000837,8.84e-35,161;CL:0002031,9.65e-35,120;CL:0002009,9.70e-35,61;CL:0000557,1.35e-34,67;CL:0002194,2.43e-33,59;CL:0000576,2.43e-33,59;CL:0000040,2.43e-33,59;CL:0000559,2.43e-33,59;CL:0000839,3.69e-30,66;CL:0000473,1.33e-29,48;CL:0000234,1.33e-29,48;CL:0000763,2.05e-28,108;CL:0000049,2.05e-28,108;CL:0000860,9.52e-26,42;CL:0002057,9.52e-26,42;CL:0000451,8.38e-08,10;CL:0000990,3.89e-07,8;CL:0002393,4.13e-07,9;CL:0002397,4.13e-07,9;CL:0000219,6.22e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.05e-18;42!CL:0000049;2.53e-08;108 | |ontology_enrichment_development_v019=CL:0002057;1.05e-18;42!CL:0000049;2.53e-08;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.81e-28!102;UBERON:0003061!2.81e-28!102;UBERON:0002193!8.41e-24!112;UBERON:0002371!2.22e-23!80;UBERON:0001474!8.62e-21!86;UBERON:0004765!3.26e-14!101;UBERON:0001434!3.26e-14!101;UBERON:0007023!4.46e-14!115;UBERON:0002405!2.09e-12!115;UBERON:0001017!3.37e-09!82;UBERON:0001049!3.55e-09!57;UBERON:0005068!3.55e-09!57;UBERON:0006241!3.55e-09!57;UBERON:0007135!3.55e-09!57;UBERON:0003081!8.50e-09!216;UBERON:0005743!8.72e-09!86;UBERON:0002616!2.09e-08!59;UBERON:0000073!6.25e-08!94;UBERON:0001016!6.25e-08!94;UBERON:0002204!1.11e-07!167;UBERON:0003080!1.61e-07!42;UBERON:0002780!1.89e-07!41;UBERON:0001890!1.89e-07!41;UBERON:0006240!1.89e-07!41;UBERON:0000955!4.94e-07!69;UBERON:0006238!4.94e-07!69 | |ontology_enrichment_uberon=UBERON:0002390!2.81e-28!102;UBERON:0003061!2.81e-28!102;UBERON:0002193!8.41e-24!112;UBERON:0002371!2.22e-23!80;UBERON:0001474!8.62e-21!86;UBERON:0004765!3.26e-14!101;UBERON:0001434!3.26e-14!101;UBERON:0007023!4.46e-14!115;UBERON:0002405!2.09e-12!115;UBERON:0001017!3.37e-09!82;UBERON:0001049!3.55e-09!57;UBERON:0005068!3.55e-09!57;UBERON:0006241!3.55e-09!57;UBERON:0007135!3.55e-09!57;UBERON:0003081!8.50e-09!216;UBERON:0005743!8.72e-09!86;UBERON:0002616!2.09e-08!59;UBERON:0000073!6.25e-08!94;UBERON:0001016!6.25e-08!94;UBERON:0002204!1.11e-07!167;UBERON:0003080!1.61e-07!42;UBERON:0002780!1.89e-07!41;UBERON:0001890!1.89e-07!41;UBERON:0006240!1.89e-07!41;UBERON:0000955!4.94e-07!69;UBERON:0006238!4.94e-07!69 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
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| ||
|short_description=p2@MICAL1 | |short_description=p2@MICAL1 | ||
}} | }} |
Latest revision as of 18:47, 19 September 2015
Short description: | p2@MICAL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MICAL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 87bp_to_ENST00000358577, ENST00000358807, NM_001159291, NM_022765, uc003ptk.2, uc010kdr.2_5end |
EntrezGene: | MICAL1 |
HGNC: | 20619 |
UniProt: | Q8TDZ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 8.19e-45 | 136 |
hematopoietic stem cell | 2.42e-37 | 168 |
nongranular leukocyte | 5.07e-37 | 115 |
myeloid leukocyte | 3.16e-36 | 72 |
hematopoietic cell | 4.30e-36 | 177 |
hematopoietic oligopotent progenitor cell | 8.84e-35 | 161 |
hematopoietic multipotent progenitor cell | 8.84e-35 | 161 |
hematopoietic lineage restricted progenitor cell | 9.65e-35 | 120 |
macrophage dendritic cell progenitor | 9.70e-35 | 61 |
granulocyte monocyte progenitor cell | 1.35e-34 | 67 |
monopoietic cell | 2.43e-33 | 59 |
monocyte | 2.43e-33 | 59 |
monoblast | 2.43e-33 | 59 |
promonocyte | 2.43e-33 | 59 |
myeloid lineage restricted progenitor cell | 3.69e-30 | 66 |
defensive cell | 1.33e-29 | 48 |
phagocyte | 1.33e-29 | 48 |
myeloid cell | 2.05e-28 | 108 |
common myeloid progenitor | 2.05e-28 | 108 |
classical monocyte | 9.52e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.52e-26 | 42 |
dendritic cell | 8.38e-08 | 10 |
conventional dendritic cell | 3.89e-07 | 8 |
intermediate monocyte | 4.13e-07 | 9 |
CD14-positive, CD16-positive monocyte | 4.13e-07 | 9 |
motile cell | 6.22e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.14e-32 | 98 |
blood island | 4.14e-32 | 98 |
bone marrow | 3.02e-27 | 76 |
hemolymphoid system | 5.85e-27 | 108 |
bone element | 4.28e-24 | 82 |
immune system | 1.52e-23 | 93 |
skeletal element | 2.46e-19 | 90 |
skeletal system | 6.13e-15 | 100 |
adult organism | 1.64e-14 | 114 |
lateral plate mesoderm | 2.05e-11 | 203 |
neural tube | 3.24e-09 | 56 |
neural rod | 3.24e-09 | 56 |
future spinal cord | 3.24e-09 | 56 |
neural keel | 3.24e-09 | 56 |
central nervous system | 5.11e-09 | 81 |
regional part of nervous system | 1.80e-08 | 53 |
regional part of brain | 1.80e-08 | 53 |
nervous system | 4.50e-08 | 89 |
regional part of forebrain | 1.04e-07 | 41 |
forebrain | 1.04e-07 | 41 |
anterior neural tube | 1.04e-07 | 41 |
future forebrain | 1.04e-07 | 41 |
musculoskeletal system | 2.48e-07 | 167 |
telencephalon | 6.89e-07 | 34 |
brain grey matter | 7.59e-07 | 34 |
gray matter | 7.59e-07 | 34 |
brain | 8.52e-07 | 68 |
future brain | 8.52e-07 | 68 |