FFCP PHASE1:Hg19::chr20:19955813..19955842,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:19955813..19955842,+
|short_description=p8@RIN2
|description=CAGE_peak_8_at_RIN2_5end
|association_with_transcript=-99bp_to_M37190_5end
|EntrezGene=54453...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54453 | |EntrezGene=54453 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=18750 | |HGNC=18750 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WYP3 | |UniProt=Q8WYP3 | ||
|association_with_transcript=-99bp_to_M37190_5end | |||
|cluster_id=chr20:19955813..19955842,+ | |||
|description=CAGE_peak_8_at_RIN2_5end | |||
|id=chr20:19955813..19955842,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.40e-11!180;CL:0000057!2.88e-11!75;CL:0000077!1.80e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0000077;4.49e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.35e-08,76;CL:0000077,1.04e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.71e-19!365;UBERON:0000481!1.47e-16!347;UBERON:0000033!1.90e-15!123;UBERON:0000062!2.50e-15!511;UBERON:0000468!3.68e-15!659;UBERON:0000153!2.49e-14!129;UBERON:0007811!2.49e-14!129;UBERON:0000467!1.43e-13!625;UBERON:0000480!2.47e-13!626;UBERON:0007023!5.57e-13!115;UBERON:0000477!6.11e-13!286;UBERON:0003075!9.50e-13!86;UBERON:0007284!9.50e-13!86;UBERON:0002616!1.69e-12!59;UBERON:0001049!2.18e-12!57;UBERON:0005068!2.18e-12!57;UBERON:0006241!2.18e-12!57;UBERON:0007135!2.18e-12!57;UBERON:0000955!4.71e-12!69;UBERON:0006238!4.71e-12!69;UBERON:0005743!7.18e-12!86;UBERON:0000119!8.52e-12!312;UBERON:0004121!1.07e-11!169;UBERON:0000483!1.65e-11!309;UBERON:0002346!1.82e-11!90;UBERON:0000924!6.71e-11!173;UBERON:0006601!6.71e-11!173;UBERON:0002050!1.23e-10!605;UBERON:0005423!1.23e-10!605;UBERON:0001017!1.32e-10!82;UBERON:0000923!2.11e-10!604;UBERON:0005291!2.11e-10!604;UBERON:0006598!2.11e-10!604;UBERON:0002532!2.11e-10!604;UBERON:0004111!3.49e-10!241;UBERON:0000073!3.89e-10!94;UBERON:0001016!3.89e-10!94;UBERON:0000922!4.51e-10!612;UBERON:0002780!3.25e-09!41;UBERON:0001890!3.25e-09!41;UBERON:0006240!3.25e-09!41;UBERON:0003080!1.31e-08!42;UBERON:0002020!1.56e-08!34;UBERON:0003528!1.56e-08!34;UBERON:0001893!2.31e-08!34;UBERON:0003056!2.52e-08!61;UBERON:0000064!3.12e-08!219;UBERON:0002791!5.19e-08!33;UBERON:0001869!1.86e-07!32;UBERON:0000025!1.93e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;4.61e-08;53!UBERON:0002616;4.61e-08;53!UBERON:0003528;1.10e-07;34!UBERON:0002020;1.10e-07;34!UBERON:0001893;1.11e-07;34!UBERON:0002780;2.12e-07;41!UBERON:0001890;2.12e-07;41!UBERON:0000125;6.08e-07;9!UBERON:0002308;6.08e-07;9!UBERON:0002791;9.08e-07;32!UBERON:0001869;9.20e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.50e-15,56;UBERON:0005068,2.50e-15,56;UBERON:0006241,2.50e-15,56;UBERON:0007135,2.50e-15,56;UBERON:0000073,7.24e-15,53;UBERON:0002616,7.24e-15,53;UBERON:0003075,1.92e-14,82;UBERON:0007284,1.92e-14,82;UBERON:0000955,7.63e-14,68;UBERON:0006238,7.63e-14,68;UBERON:0010314,2.92e-13,132;UBERON:0002346,6.77e-13,86;UBERON:0007023,1.15e-12,114;UBERON:0001017,2.36e-12,81;UBERON:0010371,5.44e-12,104;UBERON:0002780,9.75e-11,41;UBERON:0001890,9.75e-11,41;UBERON:0003080,9.75e-11,41;UBERON:0006240,9.75e-11,41;UBERON:0001016,1.81e-10,89;UBERON:0003528,7.41e-10,34;UBERON:0002020,7.41e-10,34;UBERON:0001893,1.21e-09,34;UBERON:0003056,3.03e-09,61;UBERON:0004121,6.35e-09,171;UBERON:0000924,6.35e-09,171;UBERON:0006601,6.35e-09,171;UBERON:0002791,1.33e-08,32;UBERON:0004111,1.64e-08,240;UBERON:0001869,1.70e-08,32;UBERON:0000125,1.21e-07,9;UBERON:0002308,1.21e-07,9;UBERON:0002420,1.45e-07,9;UBERON:0007245,1.45e-07,9;UBERON:0010009,1.45e-07,9;UBERON:0010011,1.45e-07,9;UBERON:0000454,1.45e-07,9;UBERON:0000119,6.66e-07,309;UBERON:0000483,9.63e-07,306 | |||
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| ||
|short_description=p8@RIN2 | |||
}} | }} |
Latest revision as of 16:40, 24 September 2015
Short description: | p8@RIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_RIN2_5end |
Coexpression cluster: | NA |
Association with transcript: | -99bp_to_M37190_5end |
EntrezGene: | RIN2 |
HGNC: | 18750 |
UniProt: | Q8WYP3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.35e-08 | 76 |
mesothelial cell | 1.04e-07 | 19 |