FFCP PHASE1:Hg19::chr4:55981146..55981149,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:55981146..55981149,- | |||
|description=CAGE_peak_at_chr4:55981146..55981149,- | |description=CAGE_peak_at_chr4:55981146..55981149,- | ||
|id=chr4:55981146..55981149,- | |id=chr4:55981146..55981149,- | ||
|ontology_enrichment_celltype=CL:0002139!9.95e-27!24;CL:0000115!2.60e-23!35;CL:0000071!4.50e-19!18;CL:0002546!4.50e-19!18;CL:0002078!4.04e-17!44;CL:0000213!1.90e-15!57;CL:0000215!1.90e-15!57;CL:0000222!4.79e-11!119;CL:1000413!1.21e-10!9;CL:0002322!7.16e-10!5;CL:0005020!2.65e-09!6;CL:0002138!2.65e-09!6;CL:0005022!2.65e-09!6;CL:0002544!2.22e-08!6;CL:0002543!9.91e-08!6;CL:0002321!7.78e-07!248 | |ontology_enrichment_celltype=CL:0002139!9.95e-27!24;CL:0000115!2.60e-23!35;CL:0000071!4.50e-19!18;CL:0002546!4.50e-19!18;CL:0002078!4.04e-17!44;CL:0000213!1.90e-15!57;CL:0000215!1.90e-15!57;CL:0000222!4.79e-11!119;CL:1000413!1.21e-10!9;CL:0002322!7.16e-10!5;CL:0005020!2.65e-09!6;CL:0002138!2.65e-09!6;CL:0005022!2.65e-09!6;CL:0002544!2.22e-08!6;CL:0002543!9.91e-08!6;CL:0002321!7.78e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0000115;6.27e-44;36!CL:0002138;4.31e-33;6!CL:0002139;2.68e-32;24!CL:0002078;6.31e-27;45!CL:0002188;4.35e-23;5!CL:0002144;8.74e-18;3!CL:1000746;1.09e-16;7!CL:1000612;1.09e-16;7!CL:0000213;3.66e-16;58!CL:0000215;3.66e-16;58!CL:0000071;1.89e-11;18!CL:0002681;5.55e-10;12!CL:0002584;5.55e-10;12!CL:1000449;4.32e-08;15!CL:0002262;1.09e-07;2!CL:1000398;1.09e-07;2!CL:1000497;3.38e-07;17!CL:0002518;3.38e-07;17 | |ontology_enrichment_celltype_v019=CL:0000115;6.27e-44;36!CL:0002138;4.31e-33;6!CL:0002139;2.68e-32;24!CL:0002078;6.31e-27;45!CL:0002188;4.35e-23;5!CL:0002144;8.74e-18;3!CL:1000746;1.09e-16;7!CL:1000612;1.09e-16;7!CL:0000213;3.66e-16;58!CL:0000215;3.66e-16;58!CL:0000071;1.89e-11;18!CL:0002681;5.55e-10;12!CL:0002584;5.55e-10;12!CL:1000449;4.32e-08;15!CL:0002262;1.09e-07;2!CL:1000398;1.09e-07;2!CL:1000497;3.38e-07;17!CL:0002518;3.38e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000115,4.43e-48,36;CL:0002078,3.27e-38,45;CL:0005020,3.98e-33,6;CL:0002138,3.98e-33,6;CL:0005022,3.98e-33,6;CL:0002139,2.63e-32,24;CL:0000213,2.37e-29,58;CL:0000215,2.37e-29,58;CL:0002188,7.94e-23,5;CL:0002144,9.14e-18,3;CL:1000746,1.68e-16,7;CL:1000612,1.68e-16,7;CL:0000222,2.55e-13,121;CL:0000071,1.91e-11,18;CL:0002546,1.91e-11,18;CL:0002681,7.10e-10,12;CL:0002584,7.10e-10,12;CL:1000449,5.25e-08,15;CL:0002262,1.05e-07,2;CL:1000398,1.05e-07,2;CL:1000497,4.01e-07,17;CL:0002518,4.01e-07,17 | |||
|ontology_enrichment_development_v019=CL:0005022;4.31e-33;6!CL:0002546;1.89e-11;18 | |ontology_enrichment_development_v019=CL:0005022;4.31e-33;6!CL:0002546;1.89e-11;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!4.50e-19!18;UBERON:0004638!4.50e-19!18;UBERON:0004852!4.50e-19!18;UBERON:0000055!1.29e-17!69;UBERON:0002049!1.71e-15!79;UBERON:0007798!1.71e-15!79;UBERON:0000487!7.13e-15!22;UBERON:0001009!1.28e-14!113;UBERON:0004872!1.47e-14!84;UBERON:0001981!1.75e-13!60;UBERON:0007500!1.75e-13!60;UBERON:0004537!1.75e-13!60;UBERON:0006965!1.75e-13!60;UBERON:0004535!3.32e-13!110;UBERON:0006914!1.28e-12!25;UBERON:0003915!1.21e-10!9;UBERON:0004700!1.21e-10!9;UBERON:0001917!1.21e-10!9;UBERON:0004111!1.78e-10!241;UBERON:0000477!2.95e-10!286;UBERON:0003914!5.27e-09!118;UBERON:0000119!1.36e-08!312;UBERON:0000483!2.71e-08!309;UBERON:0000025!4.11e-08!194;UBERON:0002465!2.39e-07!10;UBERON:0000947!2.40e-07!21;UBERON:0010191!2.40e-07!21;UBERON:0001473!8.24e-07!8;UBERON:0004536!8.24e-07!8;UBERON:0006558!8.24e-07!8;UBERON:0001637!8.24e-07!42;UBERON:0003509!8.24e-07!42;UBERON:0004572!8.24e-07!42;UBERON:0001638!9.21e-07!9;UBERON:0003920!9.21e-07!9;UBERON:0004582!9.21e-07!9 | |ontology_enrichment_uberon=UBERON:0001986!4.50e-19!18;UBERON:0004638!4.50e-19!18;UBERON:0004852!4.50e-19!18;UBERON:0000055!1.29e-17!69;UBERON:0002049!1.71e-15!79;UBERON:0007798!1.71e-15!79;UBERON:0000487!7.13e-15!22;UBERON:0001009!1.28e-14!113;UBERON:0004872!1.47e-14!84;UBERON:0001981!1.75e-13!60;UBERON:0007500!1.75e-13!60;UBERON:0004537!1.75e-13!60;UBERON:0006965!1.75e-13!60;UBERON:0004535!3.32e-13!110;UBERON:0006914!1.28e-12!25;UBERON:0003915!1.21e-10!9;UBERON:0004700!1.21e-10!9;UBERON:0001917!1.21e-10!9;UBERON:0004111!1.78e-10!241;UBERON:0000477!2.95e-10!286;UBERON:0003914!5.27e-09!118;UBERON:0000119!1.36e-08!312;UBERON:0000483!2.71e-08!309;UBERON:0000025!4.11e-08!194;UBERON:0002465!2.39e-07!10;UBERON:0000947!2.40e-07!21;UBERON:0010191!2.40e-07!21;UBERON:0001473!8.24e-07!8;UBERON:0004536!8.24e-07!8;UBERON:0006558!8.24e-07!8;UBERON:0001637!8.24e-07!42;UBERON:0003509!8.24e-07!42;UBERON:0004572!8.24e-07!42;UBERON:0001638!9.21e-07!9;UBERON:0003920!9.21e-07!9;UBERON:0004582!9.21e-07!9 | ||
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|short_description=p@chr4:55981146..55981149,- | |short_description=p@chr4:55981146..55981149,- | ||
}} | }} |
Latest revision as of 05:42, 30 July 2015
Short description: | p@chr4:55981146..55981149, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:55981146..55981149, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 4.43e-48 | 36 |
meso-epithelial cell | 3.27e-38 | 45 |
lymphangioblast | 3.98e-33 | 6 |
endothelial cell of lymphatic vessel | 3.98e-33 | 6 |
vascular lymphangioblast | 3.98e-33 | 6 |
endothelial cell of vascular tree | 2.63e-32 | 24 |
lining cell | 2.37e-29 | 58 |
barrier cell | 2.37e-29 | 58 |
glomerular endothelial cell | 7.94e-23 | 5 |
capillary endothelial cell | 9.14e-18 | 3 |
glomerular cell | 1.68e-16 | 7 |
kidney corpuscule cell | 1.68e-16 | 7 |
mesodermal cell | 2.55e-13 | 121 |
blood vessel endothelial cell | 1.91e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.91e-11 | 18 |
kidney cortical cell | 7.10e-10 | 12 |
renal cortical epithelial cell | 7.10e-10 | 12 |
epithelial cell of nephron | 5.25e-08 | 15 |
endothelial cell of sinusoid | 1.05e-07 | 2 |
endothelial cell of hepatic sinusoid | 1.05e-07 | 2 |
kidney cell | 4.01e-07 | 17 |
kidney epithelial cell | 4.01e-07 | 17 |