FFCP PHASE1:Hg19::chr7:71802595..71802610,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83698 | |EntrezGene=83698 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13248 | |HGNC=13248 | ||
|TSSclassifier=strong | |||
|UniProt=E9PFU3 | |UniProt=E9PFU3 | ||
|association_with_transcript=125bp_to_ENST00000446128_5end | |association_with_transcript=125bp_to_ENST00000446128_5end | ||
|cluster_id=chr7:71802595..71802610,- | |||
|coexpression_cluster_id=C636 | |coexpression_cluster_id=C636 | ||
|description=CAGE_peak_15_at_CALN1_5end | |description=CAGE_peak_15_at_CALN1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!1.09e-12!5 | |ontology_enrichment_celltype=CL:0002322!1.09e-12!5 | ||
|ontology_enrichment_celltype_v019=CL:0001014;1.14e-13;2!CL:0001016;1.14e-13;2 | |ontology_enrichment_celltype_v019=CL:0001014;1.14e-13;2!CL:0001016;1.14e-13;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0001014,9.40e-14,2;CL:0001016,9.40e-14,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.61e-74;3 | |ontology_enrichment_development_v019=UBERON:0006215;6.61e-74;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p15@CALN1 | |short_description=p15@CALN1 | ||
}} | }} |
Latest revision as of 08:52, 19 September 2015
Short description: | p15@CALN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_CALN1_5end |
Coexpression cluster: | C636_thymus_skeletal_cerebellum_Hodgkin_temporal_duodenum_parietal |
Association with transcript: | 125bp_to_ENST00000446128_5end |
EntrezGene: | CALN1 |
HGNC: | 13248 |
UniProt: | E9PFU3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 9.40e-14 | 2 |
immature CD1a-positive Langerhans cell | 9.40e-14 | 2 |
Ontology term | p-value | n |
---|---|---|
regional part of metencephalon | 5.54e-44 | 9 |
metencephalon | 5.54e-44 | 9 |
future metencephalon | 5.54e-44 | 9 |
cerebellum | 1.72e-37 | 6 |
rhombic lip | 1.72e-37 | 6 |
segmental subdivision of hindbrain | 3.64e-33 | 12 |
hindbrain | 3.64e-33 | 12 |
presumptive hindbrain | 3.64e-33 | 12 |
segmental subdivision of nervous system | 1.15e-30 | 13 |
posterior neural tube | 1.15e-26 | 15 |
chordal neural plate | 1.15e-26 | 15 |
thymus | 5.23e-26 | 4 |
hemolymphoid system gland | 5.23e-26 | 4 |
thymic region | 5.23e-26 | 4 |
pharyngeal gland | 5.23e-26 | 4 |
thymus primordium | 5.23e-26 | 4 |
pharyngeal epithelium | 1.03e-17 | 6 |
hemopoietic organ | 2.47e-15 | 7 |
immune organ | 2.47e-15 | 7 |
neck | 4.89e-11 | 10 |
gland of gut | 4.89e-11 | 10 |
chordate pharynx | 4.89e-11 | 10 |
pharyngeal region of foregut | 4.89e-11 | 10 |
pharynx | 4.03e-10 | 11 |
entire pharyngeal arch endoderm | 4.03e-10 | 11 |
early pharyngeal endoderm | 4.03e-10 | 11 |
pons | 1.54e-09 | 3 |
regional part of nervous system | 9.60e-08 | 53 |
regional part of brain | 9.60e-08 | 53 |
neural tube | 2.35e-07 | 56 |
neural rod | 2.35e-07 | 56 |
future spinal cord | 2.35e-07 | 56 |
neural keel | 2.35e-07 | 56 |