FFCP PHASE1:Hg19::chr20:9495383..9495390,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=24141 | |EntrezGene=24141 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16097 | |HGNC=16097 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UJQ1 | |UniProt=Q9UJQ1 | ||
|association_with_transcript=112bp_to_ENST00000427562,uc002wni.1,uc010zrc.1_5end | |association_with_transcript=112bp_to_ENST00000427562,uc002wni.1,uc010zrc.1_5end | ||
|cluster_id=chr20:9495383..9495390,+ | |||
|coexpression_cluster_id=C1485 | |coexpression_cluster_id=C1485 | ||
|description=CAGE_peak_14_at_LAMP5_5end | |description=CAGE_peak_14_at_LAMP5_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000784!7.02e-10!3 | |ontology_enrichment_celltype=CL:0000784!7.02e-10!3 | ||
|ontology_enrichment_celltype_v019=CL:0000784;1.50e-54;3!CL:0000451;1.85e-15;10 | |ontology_enrichment_celltype_v019=CL:0000784;1.50e-54;3!CL:0000451;1.85e-15;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000784,5.41e-54,3;CL:0000451,2.61e-15,10 | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.48e-10;2 | |ontology_enrichment_development_v019=UBERON:0010122;2.48e-10;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4960;8.94e-20;1!DOID:0070004;8.94e-20;1 | |ontology_enrichment_disease_v019=DOID:4960;8.94e-20;1!DOID:0070004;8.94e-20;1 | ||
|ontology_enrichment_disease_v019_2=DOID:4960,8.95e-20,1;DOID:0070004,8.95e-20,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0005383;7.01e-25;3!UBERON:0005382;7.01e-25;3!UBERON:0009663;1.05e-23;7!UBERON:0001874;2.71e-19;1!UBERON:0000369;6.17e-19;4!UBERON:0002435;6.17e-19;4!UBERON:0000204;6.17e-19;4!UBERON:0002420;1.32e-18;9!UBERON:0000125;1.32e-18;9!UBERON:0007245;1.32e-18;9!UBERON:0002308;1.32e-18;9!UBERON:0010009;1.32e-18;9!UBERON:0010011;1.32e-18;9!UBERON:0000454;1.32e-18;9!UBERON:0002021;2.33e-15;5!UBERON:0002791;4.81e-14;32!UBERON:0001869;3.89e-13;32!UBERON:0001893;3.34e-11;34!UBERON:0002780;2.05e-10;41!UBERON:0001890;2.05e-10;41!UBERON:0001873;2.48e-10;2!UBERON:0001875;2.48e-10;2!UBERON:0006514;2.48e-10;2!UBERON:0003528;1.16e-09;34!UBERON:0002020;1.16e-09;34!UBERON:0000988;2.63e-07;3!UBERON:0000955;3.96e-07;68!UBERON:0000073;4.82e-07;53!UBERON:0002616;4.82e-07;53 | |ontology_enrichment_uberon_v019=UBERON:0005383;7.01e-25;3!UBERON:0005382;7.01e-25;3!UBERON:0009663;1.05e-23;7!UBERON:0001874;2.71e-19;1!UBERON:0000369;6.17e-19;4!UBERON:0002435;6.17e-19;4!UBERON:0000204;6.17e-19;4!UBERON:0002420;1.32e-18;9!UBERON:0000125;1.32e-18;9!UBERON:0007245;1.32e-18;9!UBERON:0002308;1.32e-18;9!UBERON:0010009;1.32e-18;9!UBERON:0010011;1.32e-18;9!UBERON:0000454;1.32e-18;9!UBERON:0002021;2.33e-15;5!UBERON:0002791;4.81e-14;32!UBERON:0001869;3.89e-13;32!UBERON:0001893;3.34e-11;34!UBERON:0002780;2.05e-10;41!UBERON:0001890;2.05e-10;41!UBERON:0001873;2.48e-10;2!UBERON:0001875;2.48e-10;2!UBERON:0006514;2.48e-10;2!UBERON:0003528;1.16e-09;34!UBERON:0002020;1.16e-09;34!UBERON:0000988;2.63e-07;3!UBERON:0000955;3.96e-07;68!UBERON:0000073;4.82e-07;53!UBERON:0002616;4.82e-07;53 | ||
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| ||
|short_description=p14@LAMP5 | |short_description=p14@LAMP5 | ||
}} | }} |
Latest revision as of 17:35, 17 September 2015
Short description: | p14@LAMP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_LAMP5_5end |
Coexpression cluster: | C1485_myeloma_putamen_caudate_nucleus_Dendritic_pons_Lymphatic |
Association with transcript: | 112bp_to_ENST00000427562, uc002wni.1, uc010zrc.1_5end |
EntrezGene: | LAMP5 |
HGNC: | 16097 |
UniProt: | Q9UJQ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 5.41e-54 | 3 |
dendritic cell | 2.61e-15 | 10 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 8.95e-20 | 1 |
myeloma | 8.95e-20 | 1 |