FFCP PHASE1:Hg19::chr7:29523451..29523464,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1124 | |EntrezGene=1124 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1944 | |HGNC=1944 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=19bp_to_ENST00000410098,uc011jzv.1_5end | |association_with_transcript=19bp_to_ENST00000410098,uc011jzv.1_5end | ||
|cluster_id=chr7:29523451..29523464,+ | |||
|coexpression_cluster_id=C24 | |coexpression_cluster_id=C24 | ||
|description=CAGE_peak_21_at_CHN2_5end | |description=CAGE_peak_21_at_CHN2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006965;2.05e-15;2 | |ontology_enrichment_development_v019=UBERON:0006965;2.05e-15;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5409;2.26e-08;4 | |ontology_enrichment_disease_v019=DOID:5409;2.26e-08;4 | ||
|ontology_enrichment_disease_v019_2=DOID:5409,2.61e-08,4 | |||
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| ||
|short_description=p21@CHN2 | |short_description=p21@CHN2 | ||
}} | }} |
Latest revision as of 04:23, 18 September 2015
Short description: | p21@CHN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_CHN2_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 19bp_to_ENST00000410098, uc011jzv.1_5end |
EntrezGene: | CHN2 |
HGNC: | 1944 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.13e-57 | 2 |
regional part of epithalamus | 1.13e-57 | 2 |
secretory circumventricular organ | 1.13e-57 | 2 |
circumventricular organ | 1.13e-57 | 2 |
epithalamus | 1.13e-57 | 2 |
gland of diencephalon | 1.78e-29 | 4 |
neuroendocrine gland | 1.78e-29 | 4 |
regional part of diencephalon | 1.78e-29 | 4 |
substantia nigra | 2.37e-29 | 1 |
midbrain nucleus | 2.37e-29 | 1 |
regional part of midbrain | 2.37e-29 | 1 |
midbrain | 2.37e-29 | 1 |
presumptive midbrain | 2.37e-29 | 1 |
midbrain neural tube | 2.37e-29 | 1 |
diencephalon | 2.46e-17 | 7 |
future diencephalon | 2.46e-17 | 7 |
regional part of forebrain | 2.46e-11 | 41 |
forebrain | 2.46e-11 | 41 |
anterior neural tube | 2.46e-11 | 41 |
future forebrain | 2.46e-11 | 41 |
adult organism | 3.44e-09 | 114 |
regional part of nervous system | 6.41e-09 | 53 |
regional part of brain | 6.41e-09 | 53 |
neural tube | 1.79e-08 | 56 |
neural rod | 1.79e-08 | 56 |
future spinal cord | 1.79e-08 | 56 |
neural keel | 1.79e-08 | 56 |
pre-chordal neural plate | 8.01e-08 | 61 |
brain | 5.66e-07 | 68 |
future brain | 5.66e-07 | 68 |
parietal lobe | 5.70e-07 | 5 |
small intestine | 6.39e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.61e-08 | 4 |