FFCP PHASE1:Hg19::chr18:77905923..77905938,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100130522 | |EntrezGene=100130522 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=116bp_to_ENST00000424835,NR_028339,NR_028340,uc002lnx.2,uc010xfn.1,uc010xfo.1_5end | |association_with_transcript=116bp_to_ENST00000424835,NR_028339,NR_028340,uc002lnx.2,uc010xfn.1,uc010xfo.1_5end | ||
|cluster_id=chr18:77905923..77905938,+ | |||
|coexpression_cluster_id=C274 | |coexpression_cluster_id=C274 | ||
|description=CAGE_peak_1_at_LOC100130522_5end | |description=CAGE_peak_1_at_LOC100130522_5end | ||
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|ontology_enrichment_celltype=CL:0000860!1.23e-19!45;CL:0002057!4.77e-18!42;CL:0002009!1.60e-14!65;CL:0000557!3.28e-14!71;CL:0002194!6.10e-14!63;CL:0000576!6.10e-14!63;CL:0000040!6.10e-14!63;CL:0000559!6.10e-14!63;CL:0000839!1.38e-13!70;CL:0000766!1.14e-11!76 | |ontology_enrichment_celltype=CL:0000860!1.23e-19!45;CL:0002057!4.77e-18!42;CL:0002009!1.60e-14!65;CL:0000557!3.28e-14!71;CL:0002194!6.10e-14!63;CL:0000576!6.10e-14!63;CL:0000040!6.10e-14!63;CL:0000559!6.10e-14!63;CL:0000839!1.38e-13!70;CL:0000766!1.14e-11!76 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.69e-20;33!CL:0002057;9.69e-20;33!CL:0000473;2.27e-14;39!CL:0000234;2.27e-14;39!CL:0000576;9.34e-14;48!CL:0000766;6.84e-08;69 | |ontology_enrichment_celltype_v019=CL:0000860;9.69e-20;33!CL:0002057;9.69e-20;33!CL:0000473;2.27e-14;39!CL:0000234;2.27e-14;39!CL:0000576;9.34e-14;48!CL:0000766;6.84e-08;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.51e-22,42;CL:0002057,1.51e-22,42;CL:0000473,9.66e-20,48;CL:0000234,9.66e-20,48;CL:0000557,4.18e-17,67;CL:0002009,1.26e-16,61;CL:0002194,7.57e-16,59;CL:0000576,7.57e-16,59;CL:0000040,7.57e-16,59;CL:0000559,7.57e-16,59;CL:0000839,7.80e-16,66;CL:0000766,8.84e-14,72;CL:0000763,9.36e-08,108;CL:0000049,9.36e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.99e-16;42 | |ontology_enrichment_development_v019=CL:0002057;2.99e-16;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!3.34e-15!511;UBERON:0005743!2.51e-12!86;UBERON:0001017!6.53e-12!82;UBERON:0002371!8.08e-12!80;UBERON:0001049!2.68e-11!57;UBERON:0005068!2.68e-11!57;UBERON:0006241!2.68e-11!57;UBERON:0007135!2.68e-11!57;UBERON:0001474!2.98e-11!86;UBERON:0000955!6.16e-11!69;UBERON:0006238!6.16e-11!69;UBERON:0000922!1.11e-10!612;UBERON:0000073!1.16e-10!94;UBERON:0001016!1.16e-10!94;UBERON:0002050!5.45e-10!605;UBERON:0005423!5.45e-10!605;UBERON:0000923!5.97e-10!604;UBERON:0005291!5.97e-10!604;UBERON:0006598!5.97e-10!604;UBERON:0002532!5.97e-10!604;UBERON:0002405!6.69e-10!115;UBERON:0003080!1.17e-09!42;UBERON:0004765!2.75e-09!101;UBERON:0001434!2.75e-09!101;UBERON:0002780!2.86e-09!41;UBERON:0001890!2.86e-09!41;UBERON:0006240!2.86e-09!41;UBERON:0002616!5.52e-09!59;UBERON:0007023!6.53e-09!115;UBERON:0002390!1.09e-08!102;UBERON:0003061!1.09e-08!102;UBERON:0002346!1.51e-08!90;UBERON:0003075!2.88e-08!86;UBERON:0007284!2.88e-08!86;UBERON:0002020!3.61e-08!34;UBERON:0003528!3.61e-08!34;UBERON:0002791!1.10e-07!33;UBERON:0001893!1.16e-07!34;UBERON:0000467!1.82e-07!625;UBERON:0003056!2.36e-07!61;UBERON:0000480!2.69e-07!626;UBERON:0001869!5.67e-07!32;UBERON:0000468!7.81e-07!659;UBERON:0002193!8.83e-07!112 | |ontology_enrichment_uberon=UBERON:0000062!3.34e-15!511;UBERON:0005743!2.51e-12!86;UBERON:0001017!6.53e-12!82;UBERON:0002371!8.08e-12!80;UBERON:0001049!2.68e-11!57;UBERON:0005068!2.68e-11!57;UBERON:0006241!2.68e-11!57;UBERON:0007135!2.68e-11!57;UBERON:0001474!2.98e-11!86;UBERON:0000955!6.16e-11!69;UBERON:0006238!6.16e-11!69;UBERON:0000922!1.11e-10!612;UBERON:0000073!1.16e-10!94;UBERON:0001016!1.16e-10!94;UBERON:0002050!5.45e-10!605;UBERON:0005423!5.45e-10!605;UBERON:0000923!5.97e-10!604;UBERON:0005291!5.97e-10!604;UBERON:0006598!5.97e-10!604;UBERON:0002532!5.97e-10!604;UBERON:0002405!6.69e-10!115;UBERON:0003080!1.17e-09!42;UBERON:0004765!2.75e-09!101;UBERON:0001434!2.75e-09!101;UBERON:0002780!2.86e-09!41;UBERON:0001890!2.86e-09!41;UBERON:0006240!2.86e-09!41;UBERON:0002616!5.52e-09!59;UBERON:0007023!6.53e-09!115;UBERON:0002390!1.09e-08!102;UBERON:0003061!1.09e-08!102;UBERON:0002346!1.51e-08!90;UBERON:0003075!2.88e-08!86;UBERON:0007284!2.88e-08!86;UBERON:0002020!3.61e-08!34;UBERON:0003528!3.61e-08!34;UBERON:0002791!1.10e-07!33;UBERON:0001893!1.16e-07!34;UBERON:0000467!1.82e-07!625;UBERON:0003056!2.36e-07!61;UBERON:0000480!2.69e-07!626;UBERON:0001869!5.67e-07!32;UBERON:0000468!7.81e-07!659;UBERON:0002193!8.83e-07!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;8.05e-08;34!UBERON:0002020;8.05e-08;34!UBERON:0002780;1.51e-07;41!UBERON:0001890;1.51e-07;41!UBERON:0002791;2.01e-07;32!UBERON:0001893;9.94e-07;34 | |ontology_enrichment_uberon_v019=UBERON:0003528;8.05e-08;34!UBERON:0002020;8.05e-08;34!UBERON:0002780;1.51e-07;41!UBERON:0001890;1.51e-07;41!UBERON:0002791;2.01e-07;32!UBERON:0001893;9.94e-07;34 | ||
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| ||
|short_description=p1@LOC100130522 | |short_description=p1@LOC100130522 | ||
}} | }} |
Latest revision as of 20:12, 24 September 2015
Short description: | p1@LOC100130522 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC100130522_5end |
Coexpression cluster: | C274_CD14_Mast_immature_Basophils_mature_vagina_Hepatocyte |
Association with transcript: | 116bp_to_ENST00000424835, NR_028339, NR_028340, uc002lnx.2, uc010xfn.1, uc010xfo.1_5end |
EntrezGene: | LOC100130522 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.51e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.51e-22 | 42 |
defensive cell | 9.66e-20 | 48 |
phagocyte | 9.66e-20 | 48 |
granulocyte monocyte progenitor cell | 4.18e-17 | 67 |
macrophage dendritic cell progenitor | 1.26e-16 | 61 |
monopoietic cell | 7.57e-16 | 59 |
monocyte | 7.57e-16 | 59 |
monoblast | 7.57e-16 | 59 |
promonocyte | 7.57e-16 | 59 |
myeloid lineage restricted progenitor cell | 7.80e-16 | 66 |
myeloid leukocyte | 8.84e-14 | 72 |
myeloid cell | 9.36e-08 | 108 |
common myeloid progenitor | 9.36e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.45e-15 | 76 |
bone element | 2.11e-14 | 82 |
skeletal element | 2.11e-12 | 90 |
immune system | 1.81e-11 | 93 |
skeletal system | 1.60e-10 | 100 |
hematopoietic system | 4.79e-10 | 98 |
blood island | 4.79e-10 | 98 |
neural tube | 2.27e-09 | 56 |
neural rod | 2.27e-09 | 56 |
future spinal cord | 2.27e-09 | 56 |
neural keel | 2.27e-09 | 56 |
brain grey matter | 5.15e-09 | 34 |
gray matter | 5.15e-09 | 34 |
regional part of forebrain | 6.59e-09 | 41 |
forebrain | 6.59e-09 | 41 |
anterior neural tube | 6.59e-09 | 41 |
future forebrain | 6.59e-09 | 41 |
central nervous system | 1.18e-08 | 81 |
regional part of nervous system | 1.73e-08 | 53 |
regional part of brain | 1.73e-08 | 53 |
brain | 2.73e-08 | 68 |
future brain | 2.73e-08 | 68 |
regional part of telencephalon | 5.16e-08 | 32 |
telencephalon | 6.16e-08 | 34 |
organ system subdivision | 9.09e-08 | 223 |
hemolymphoid system | 1.06e-07 | 108 |
nervous system | 3.79e-07 | 89 |
cerebral hemisphere | 4.57e-07 | 32 |