FFCP PHASE1:Mm9::chr16:11984200..11984246,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=72555 | |EntrezGene=72555 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=E9QN38,Q9CZN4 | |UniProt=E9QN38,Q9CZN4 | ||
|association_with_transcript=0bp_to_NM_001174086,NM_028277,uc007yfr.1,uc007yfs.2,uc007yft.2_5end | |association_with_transcript=0bp_to_NM_001174086,NM_028277,uc007yfr.1,uc007yfs.2,uc007yft.2_5end | ||
|cluster_id=chr16:11984200..11984246,+ | |||
|description=CAGE_peak_1_at_Shisa9_5end | |description=CAGE_peak_1_at_Shisa9_5end | ||
|id=chr16:11984200..11984246,+ | |id=chr16:11984200..11984246,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.37e-13!23;CL:0000337!1.37e-13!23;CL:0000540!1.31e-10!33;CL:0000047!1.31e-10!33;CL:0000031!1.31e-10!33;CL:0000404!1.31e-10!33;CL:0002319!1.45e-10!43;CL:0000221!3.77e-10!44;CL:0000133!3.77e-10!44;CL:0000055!5.17e-07!50 | |ontology_enrichment_celltype=CL:0000117!1.37e-13!23;CL:0000337!1.37e-13!23;CL:0000540!1.31e-10!33;CL:0000047!1.31e-10!33;CL:0000031!1.31e-10!33;CL:0000404!1.31e-10!33;CL:0002319!1.45e-10!43;CL:0000221!3.77e-10!44;CL:0000133!3.77e-10!44;CL:0000055!5.17e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.50e-18,23;CL:0000337,7.50e-18,23;CL:0000540,4.70e-12,33;CL:0000047,4.70e-12,33;CL:0000031,4.70e-12,33;CL:0000404,4.70e-12,33;CL:0002319,1.26e-10,43;CL:0000221,3.85e-10,44;CL:0000133,3.85e-10,44;CL:0000393,9.67e-09,39;CL:0000211,9.67e-09,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.31e-27!73;UBERON:0005743!1.31e-27!73;UBERON:0000073!2.16e-26!75;UBERON:0001016!2.16e-26!75;UBERON:0002346!1.54e-24!71;UBERON:0003075!1.54e-24!71;UBERON:0007284!1.54e-24!71;UBERON:0001049!3.80e-24!52;UBERON:0005068!3.80e-24!52;UBERON:0006241!3.80e-24!52;UBERON:0007135!3.80e-24!52;UBERON:0000955!3.36e-23!50;UBERON:0006238!3.36e-23!50;UBERON:0002616!2.01e-22!49;UBERON:0004121!7.41e-22!102;UBERON:0000924!7.41e-22!102;UBERON:0006601!7.41e-22!102;UBERON:0000033!1.33e-19!63;UBERON:0002020!1.99e-18!34;UBERON:0003080!4.62e-18!40;UBERON:0002780!2.42e-17!39;UBERON:0001890!2.42e-17!39;UBERON:0006240!2.42e-17!39;UBERON:0003056!4.69e-17!49;UBERON:0002791!2.42e-15!29;UBERON:0003528!2.42e-15!29;UBERON:0001893!2.42e-15!29;UBERON:0000025!7.76e-12!114;UBERON:0007811!7.55e-11!86;UBERON:0004111!1.04e-10!122;UBERON:0000956!1.78e-10!21;UBERON:0001869!1.78e-10!21;UBERON:0000203!1.78e-10!21;UBERON:0000153!6.87e-10!94;UBERON:0000468!2.40e-09!333;UBERON:0002619!1.42e-08!17;UBERON:0002021!1.82e-07!10;UBERON:0000411!1.82e-07!10;UBERON:0001950!1.82e-07!10;UBERON:0000922!2.40e-07!328 | |ontology_enrichment_uberon=UBERON:0001017!1.31e-27!73;UBERON:0005743!1.31e-27!73;UBERON:0000073!2.16e-26!75;UBERON:0001016!2.16e-26!75;UBERON:0002346!1.54e-24!71;UBERON:0003075!1.54e-24!71;UBERON:0007284!1.54e-24!71;UBERON:0001049!3.80e-24!52;UBERON:0005068!3.80e-24!52;UBERON:0006241!3.80e-24!52;UBERON:0007135!3.80e-24!52;UBERON:0000955!3.36e-23!50;UBERON:0006238!3.36e-23!50;UBERON:0002616!2.01e-22!49;UBERON:0004121!7.41e-22!102;UBERON:0000924!7.41e-22!102;UBERON:0006601!7.41e-22!102;UBERON:0000033!1.33e-19!63;UBERON:0002020!1.99e-18!34;UBERON:0003080!4.62e-18!40;UBERON:0002780!2.42e-17!39;UBERON:0001890!2.42e-17!39;UBERON:0006240!2.42e-17!39;UBERON:0003056!4.69e-17!49;UBERON:0002791!2.42e-15!29;UBERON:0003528!2.42e-15!29;UBERON:0001893!2.42e-15!29;UBERON:0000025!7.76e-12!114;UBERON:0007811!7.55e-11!86;UBERON:0004111!1.04e-10!122;UBERON:0000956!1.78e-10!21;UBERON:0001869!1.78e-10!21;UBERON:0000203!1.78e-10!21;UBERON:0000153!6.87e-10!94;UBERON:0000468!2.40e-09!333;UBERON:0002619!1.42e-08!17;UBERON:0002021!1.82e-07!10;UBERON:0000411!1.82e-07!10;UBERON:0001950!1.82e-07!10;UBERON:0000922!2.40e-07!328 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.54e-32,73;UBERON:0000073,8.90e-32,54;UBERON:0001016,2.44e-30,75;UBERON:0001049,1.13e-29,52;UBERON:0005068,1.13e-29,52;UBERON:0006241,1.13e-29,52;UBERON:0007135,1.13e-29,52;UBERON:0000955,1.23e-25,47;UBERON:0006238,1.23e-25,47;UBERON:0002346,1.44e-25,64;UBERON:0003075,1.44e-25,64;UBERON:0007284,1.44e-25,64;UBERON:0002616,1.24e-24,46;UBERON:0002020,1.79e-23,34;UBERON:0003080,2.29e-22,40;UBERON:0004121,1.39e-21,95;UBERON:0000924,1.39e-21,95;UBERON:0006601,1.39e-21,95;UBERON:0002780,2.08e-21,39;UBERON:0001890,2.08e-21,39;UBERON:0006240,2.08e-21,39;UBERON:0010371,7.22e-20,73;UBERON:0003528,2.59e-19,29;UBERON:0002791,2.59e-19,29;UBERON:0001893,2.59e-19,29;UBERON:0003056,1.23e-18,49;UBERON:0010314,9.17e-16,92;UBERON:0000956,8.80e-13,21;UBERON:0001869,8.80e-13,21;UBERON:0000203,8.80e-13,21;UBERON:0002619,3.15e-10,17;UBERON:0002021,1.46e-09,10;UBERON:0000411,1.46e-09,10;UBERON:0001950,1.46e-09,10;UBERON:0000025,8.86e-09,114;UBERON:0004111,6.68e-08,122;UBERON:0002420,7.36e-08,8;UBERON:0007245,7.36e-08,8;UBERON:0010009,7.36e-08,8;UBERON:0010011,7.36e-08,8;UBERON:0000454,7.36e-08,8;UBERON:0003076,1.11e-07,12;UBERON:0003057,1.11e-07,12 | |||
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|short_description=p1@Shisa9 | |short_description=p1@Shisa9 | ||
}} | }} |
Latest revision as of 15:20, 1 October 2015
Short description: | p1@Shisa9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Shisa9_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_NM_001174086, NM_028277, uc007yfr.1, uc007yfs.2, uc007yft.2_5end |
EntrezGene: | Shisa9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.50e-18 | 23 |
neuroblast (sensu Vertebrata) | 7.50e-18 | 23 |
neuron | 4.70e-12 | 33 |
neuronal stem cell | 4.70e-12 | 33 |
neuroblast | 4.70e-12 | 33 |
electrically signaling cell | 4.70e-12 | 33 |
neural cell | 1.26e-10 | 43 |
ectodermal cell | 3.85e-10 | 44 |
neurectodermal cell | 3.85e-10 | 44 |
electrically responsive cell | 9.67e-09 | 39 |
electrically active cell | 9.67e-09 | 39 |