FFCP PHASE1:Mm9::chr9:4795914..4795928,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14802 | |EntrezGene=14802 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=30 | |MCL_coexpression_id=30 | ||
|TSSclassifier=NA | |||
|UniProt=G5E863,Q9Z2W8,E9PX01,Q8C069 | |UniProt=G5E863,Q9Z2W8,E9PX01,Q8C069 | ||
|association_with_transcript=305bp_to_ENSMUST00000027020,ENSMUST00000063508,ENSMUST00000163309,NM_001113180,NM_001113181,NM_019691,uc009obp.2,uc009obq.2,uc012gnm.1_5end | |association_with_transcript=305bp_to_ENSMUST00000027020,ENSMUST00000063508,ENSMUST00000163309,NM_001113180,NM_001113181,NM_019691,uc009obp.2,uc009obq.2,uc012gnm.1_5end | ||
|cluster_id=chr9:4795914..4795928,- | |||
|description=CAGE_peak_7_at_Gria4_5end | |description=CAGE_peak_7_at_Gria4_5end | ||
|id=chr9:4795914..4795928,- | |id=chr9:4795914..4795928,- | ||
|ontology_enrichment_celltype=CL:0000540!1.70e-19!33;CL:0000047!1.70e-19!33;CL:0000031!1.70e-19!33;CL:0000404!1.70e-19!33;CL:0000393!9.65e-17!39;CL:0000211!9.65e-17!39;CL:0002319!3.41e-14!43;CL:0000221!1.30e-13!44;CL:0000133!1.30e-13!44;CL:0000055!3.74e-12!50;CL:0000117!2.63e-11!23;CL:0000337!2.63e-11!23;CL:0000107!1.22e-09!9 | |ontology_enrichment_celltype=CL:0000540!1.70e-19!33;CL:0000047!1.70e-19!33;CL:0000031!1.70e-19!33;CL:0000404!1.70e-19!33;CL:0000393!9.65e-17!39;CL:0000211!9.65e-17!39;CL:0002319!3.41e-14!43;CL:0000221!1.30e-13!44;CL:0000133!1.30e-13!44;CL:0000055!3.74e-12!50;CL:0000117!2.63e-11!23;CL:0000337!2.63e-11!23;CL:0000107!1.22e-09!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000107,5.39e-20,9;CL:0000540,4.33e-18,33;CL:0000047,4.33e-18,33;CL:0000031,4.33e-18,33;CL:0000404,4.33e-18,33;CL:0000393,1.24e-14,39;CL:0000211,1.24e-14,39;CL:0002319,7.19e-13,43;CL:0000221,1.76e-12,44;CL:0000133,1.76e-12,44;CL:0002610,5.06e-07,3;CL:0002614,5.32e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.58e-33!73;UBERON:0005743!2.58e-33!73;UBERON:0000073!8.13e-33!75;UBERON:0001016!8.13e-33!75;UBERON:0004121!1.13e-28!102;UBERON:0000924!1.13e-28!102;UBERON:0006601!1.13e-28!102;UBERON:0002346!3.30e-26!71;UBERON:0003075!3.30e-26!71;UBERON:0007284!3.30e-26!71;UBERON:0001049!8.79e-22!52;UBERON:0005068!8.79e-22!52;UBERON:0006241!8.79e-22!52;UBERON:0007135!8.79e-22!52;UBERON:0000033!1.07e-21!63;UBERON:0000955!1.56e-20!50;UBERON:0006238!1.56e-20!50;UBERON:0002616!1.44e-19!49;UBERON:0003056!1.24e-17!49;UBERON:0002020!1.79e-16!34;UBERON:0003080!5.41e-15!40;UBERON:0002780!3.28e-14!39;UBERON:0001890!3.28e-14!39;UBERON:0006240!3.28e-14!39;UBERON:0002791!7.86e-13!29;UBERON:0003528!7.86e-13!29;UBERON:0001893!7.86e-13!29;UBERON:0007811!1.68e-11!86;UBERON:0002410!1.22e-09!9;UBERON:0000153!2.96e-09!94;UBERON:0000956!4.48e-09!21;UBERON:0001869!4.48e-09!21;UBERON:0000203!4.48e-09!21;UBERON:0000010!2.18e-08!11;UBERON:0002619!3.65e-08!17;UBERON:0002021!6.50e-08!10;UBERON:0000411!6.50e-08!10;UBERON:0001950!6.50e-08!10;UBERON:0003076!1.27e-07!12;UBERON:0003057!1.27e-07!12 | |ontology_enrichment_uberon=UBERON:0001017!2.58e-33!73;UBERON:0005743!2.58e-33!73;UBERON:0000073!8.13e-33!75;UBERON:0001016!8.13e-33!75;UBERON:0004121!1.13e-28!102;UBERON:0000924!1.13e-28!102;UBERON:0006601!1.13e-28!102;UBERON:0002346!3.30e-26!71;UBERON:0003075!3.30e-26!71;UBERON:0007284!3.30e-26!71;UBERON:0001049!8.79e-22!52;UBERON:0005068!8.79e-22!52;UBERON:0006241!8.79e-22!52;UBERON:0007135!8.79e-22!52;UBERON:0000033!1.07e-21!63;UBERON:0000955!1.56e-20!50;UBERON:0006238!1.56e-20!50;UBERON:0002616!1.44e-19!49;UBERON:0003056!1.24e-17!49;UBERON:0002020!1.79e-16!34;UBERON:0003080!5.41e-15!40;UBERON:0002780!3.28e-14!39;UBERON:0001890!3.28e-14!39;UBERON:0006240!3.28e-14!39;UBERON:0002791!7.86e-13!29;UBERON:0003528!7.86e-13!29;UBERON:0001893!7.86e-13!29;UBERON:0007811!1.68e-11!86;UBERON:0002410!1.22e-09!9;UBERON:0000153!2.96e-09!94;UBERON:0000956!4.48e-09!21;UBERON:0001869!4.48e-09!21;UBERON:0000203!4.48e-09!21;UBERON:0000010!2.18e-08!11;UBERON:0002619!3.65e-08!17;UBERON:0002021!6.50e-08!10;UBERON:0000411!6.50e-08!10;UBERON:0001950!6.50e-08!10;UBERON:0003076!1.27e-07!12;UBERON:0003057!1.27e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.32e-38,73;UBERON:0001016,5.62e-37,75;UBERON:0004121,3.14e-29,95;UBERON:0000924,3.14e-29,95;UBERON:0006601,3.14e-29,95;UBERON:0000073,3.16e-24,54;UBERON:0002346,3.52e-23,64;UBERON:0003075,3.52e-23,64;UBERON:0007284,3.52e-23,64;UBERON:0001049,2.14e-21,52;UBERON:0005068,2.14e-21,52;UBERON:0006241,2.14e-21,52;UBERON:0007135,2.14e-21,52;UBERON:0002410,5.39e-20,9;UBERON:0010371,1.76e-19,73;UBERON:0000955,2.30e-18,47;UBERON:0006238,2.30e-18,47;UBERON:0002616,8.56e-17,46;UBERON:0002021,8.72e-17,10;UBERON:0000411,8.72e-17,10;UBERON:0001950,8.72e-17,10;UBERON:0000010,5.02e-16,11;UBERON:0002020,5.95e-15,34;UBERON:0010314,4.71e-14,92;UBERON:0003080,5.14e-12,40;UBERON:0003528,5.98e-12,29;UBERON:0002791,5.98e-12,29;UBERON:0001893,5.98e-12,29;UBERON:0003076,2.07e-11,12;UBERON:0003057,2.07e-11,12;UBERON:0002619,3.45e-11,17;UBERON:0002780,8.19e-11,39;UBERON:0001890,8.19e-11,39;UBERON:0006240,8.19e-11,39;UBERON:0000956,9.20e-11,21;UBERON:0001869,9.20e-11,21;UBERON:0000203,9.20e-11,21;UBERON:0003056,2.58e-10,49;UBERON:0011216,2.42e-09,194;UBERON:0002950,6.65e-09,4;UBERON:0001891,6.65e-09,4;UBERON:0009616,6.65e-09,4;UBERON:0010286,6.65e-09,4;UBERON:0000013,6.60e-08,3;UBERON:0000011,9.53e-08,3;UBERON:0010313,1.60e-07,3;UBERON:0002342,1.60e-07,3;UBERON:0002005,1.60e-07,3;UBERON:0005428,1.60e-07,3;UBERON:0005062,1.60e-07,3;UBERON:0004684,5.06e-07,3;UBERON:0002275,5.06e-07,3;UBERON:0002038,5.32e-07,3;UBERON:0009663,5.32e-07,3;UBERON:0009661,5.32e-07,3;UBERON:0000125,5.32e-07,3;UBERON:0002308,5.32e-07,3;UBERON:0004733,7.06e-07,6;UBERON:0004732,7.06e-07,6;UBERON:0002028,7.06e-07,6;UBERON:0007277,7.06e-07,6 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0,0.630974884054146,0.856952953211411,1.76694832761291,0.367472397644862,0.0958454710182364,0.919218786610021,3.30347642998166,1.65993539510744,1.22885226604995,0.395658863190582,0.731901148819277,0,3.90856198601933,1.12552522006336,1.5279824777681,2.06240009831567,2.13557521198654,0.559198337475902,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0.173485326766136,0.608930956624282,0,0,0,0,0,0,0,0,0,0,0,16.1029438356351,13.1951425292477,0,0,0,0,2.09706895166752,0.915001205637253,0.376963056338593,3.99795936442236,1.53429274398198,1.87009240103604,1.29793010454206,0.101839363850316,0,0,0.210441855886474,0,0,0.540186389416048,0.60281927134286,0.272145996605311,0.384341160854549,0.937017245597288,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0.102904612379284,0,0,0,0,0.128867461322093,0.403367049246685,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0.571242563048644,0,0.203651327845314,0,0.280543279561274,0,0,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56880943980467,2.46144541843627,0,0,1.89304931649754,2.34263246577983,3.23135096599198,2.86762557543062,2.22798674082394,3.11384183867716,3.64329631507405,2.04579100537918,4.34816555741176,4.81981974632711,0,0.178065603667255,0.488660878060728,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.18006109403131,0,0,0.177340233642274,0.356737635204141,0.164549020602121,0,0,0.21183207086382,0,0,0,0,0,0,0,2.22510362412612,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0.149516546043979,0,0.388902376688095,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,1.84130094602871,4.01026859407578,2.06223818812425,0,1.5107877947794,1.35004500046361,4.05289082901798,2.71885445390523,1.03552062350364,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0.44449345560323,0.618105171716683,0,0,0,0.377252682772152,0,0.320125762024346,0.229741875822453,0.476293691283074,0.115884325944855,0.38581844092741,0,0,0,0.177475806159338,0,0.436039249896986,0.282328141245992,0,0.182927972872773,0,0.271608227691724,0.561142271657738,0.237270036248348,0.197008964751127,0,0.154936841185966,0,0.249810577937946,0,0.429742108096597,0,0.220591419119515,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0,0.630974884054146,0.856952953211411,1.76694832761291,0.367472397644862,0.0958454710182364,0.919218786610021,3.30347642998166,1.65993539510744,1.22885226604995,0.395658863190582,0.731901148819277,0,3.90856198601933,1.12552522006336,1.5279824777681,2.06240009831567,2.13557521198654,0.559198337475902,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0.173485326766136,0.608930956624282,0,0,0,0,0,0,0,0,0,0,0,16.1029438356351,13.1951425292477,0,0,0,0,2.09706895166752,0.915001205637253,0.376963056338593,3.99795936442236,1.53429274398198,1.87009240103604,1.29793010454206,0.101839363850316,0,0,0.210441855886474,0,0,0.540186389416048,0.60281927134286,0.272145996605311,0.384341160854549,0.937017245597288,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0.102904612379284,0,0,0,0,0.128867461322093,0.403367049246685,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0.571242563048644,0,0.203651327845314,0,0.280543279561274,0,0,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56880943980467,2.46144541843627,0,0,1.89304931649754,2.34263246577983,3.23135096599198,2.86762557543062,2.22798674082394,3.11384183867716,3.64329631507405,2.04579100537918,4.34816555741176,4.81981974632711,0,0.178065603667255,0.488660878060728,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.18006109403131,0,0,0.177340233642274,0.356737635204141,0.164549020602121,0,0,0.21183207086382,0,0,0,0,0,0,0,2.22510362412612,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0.149516546043979,0,0.388902376688095,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,1.84130094602871,4.01026859407578,2.06223818812425,0,1.5107877947794,1.35004500046361,4.05289082901798,2.71885445390523,1.03552062350364,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0.44449345560323,0.618105171716683,0,0,0,0.377252682772152,0,0.320125762024346,0.229741875822453,0.476293691283074,0.115884325944855,0.38581844092741,0,0,0,0.177475806159338,0,0.436039249896986,0.282328141245992,0,0.182927972872773,0,0.271608227691724,0.561142271657738,0.237270036248348,0.197008964751127,0,0.154936841185966,0,0.249810577937946,0,0.429742108096597,0,0.220591419119515,0 | ||
|short_description=p7@Gria4 | |short_description=p7@Gria4 | ||
}} | }} |
Latest revision as of 18:43, 26 September 2015
Short description: | p7@Gria4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Gria4_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | 305bp_to_ENSMUST00000027020, ENSMUST00000063508, ENSMUST00000163309, NM_001113180, NM_001113181, NM_019691, uc009obp.2, uc009obq.2, uc012gnm.1_5end |
EntrezGene: | Gria4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 5.39e-20 | 9 |
neuron | 4.33e-18 | 33 |
neuronal stem cell | 4.33e-18 | 33 |
neuroblast | 4.33e-18 | 33 |
electrically signaling cell | 4.33e-18 | 33 |
electrically responsive cell | 1.24e-14 | 39 |
electrically active cell | 1.24e-14 | 39 |
neural cell | 7.19e-13 | 43 |
ectodermal cell | 1.76e-12 | 44 |
neurectodermal cell | 1.76e-12 | 44 |
raphe nuclei neuron | 5.06e-07 | 3 |
neuron of the substantia nigra | 5.32e-07 | 3 |