FFCP PHASE1:Hg19::chr3:16306114..16306133,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:16306114..16306133,-
|short_description=p5@DPH3
|description=CAGE_peak_5_at_DPH3_5end
|association_with_transcript=-20bp_to_ENST00000462982_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=285381 | |EntrezGene=285381 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27717 | |HGNC=27717 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-20bp_to_ENST00000462982_5end | |||
|cluster_id=chr3:16306114..16306133,- | |||
|coexpression_cluster_id=C4300 | |||
|description=CAGE_peak_5_at_DPH3_5end | |||
|id=chr3:16306114..16306133,- | |||
|ontology_enrichment_celltype=CL:0000738!1.43e-29!140;CL:0000988!3.07e-27!182;CL:0000037!3.18e-27!172;CL:0000566!3.18e-27!172;CL:0000766!6.27e-25!76;CL:0002032!3.01e-24!165;CL:0000837!3.01e-24!165;CL:0002057!3.16e-24!42;CL:0000860!1.85e-23!45;CL:0000763!1.67e-22!112;CL:0000049!1.67e-22!112;CL:0000557!2.93e-22!71;CL:0002031!7.63e-22!124;CL:0000839!6.21e-20!70;CL:0002087!8.60e-20!119;CL:0002009!4.07e-19!65;CL:0002194!1.05e-17!63;CL:0000576!1.05e-17!63;CL:0000040!1.05e-17!63;CL:0000559!1.05e-17!63;CL:0002320!5.66e-14!365;CL:0000134!2.59e-13!358;CL:0000048!2.40e-11!430;CL:0000034!5.81e-11!444;CL:0000723!1.50e-10!436;CL:0000219!2.02e-10!390;CL:0002393!9.51e-09!9;CL:0002397!9.51e-09!9 | |||
|ontology_enrichment_celltype_v019=CL:0000094;1.63e-20;8!CL:0000081;5.84e-19;11!CL:0000766;7.51e-19;69!CL:0000860;4.43e-17;33!CL:0002057;4.43e-17;33!CL:0000576;1.35e-15;48!CL:0000624;5.79e-14;6!CL:0000097;1.77e-11;5!CL:0000623;2.73e-11;3!CL:0000767;4.11e-11;3!CL:0000791;5.62e-11;18!CL:0000789;5.62e-11;18!CL:0002419;5.62e-11;18!CL:0000473;6.53e-11;39!CL:0000234;6.53e-11;39!CL:0002393;8.17e-10;6!CL:0002397;8.17e-10;6!CL:0002087;2.46e-09;104!CL:0000763;4.77e-09;100!CL:0000738;8.55e-09;136!CL:0000771;2.59e-08;2!CL:0000084;1.64e-07;25!CL:0001014;1.92e-07;2!CL:0001016;1.92e-07;2!CL:0000988;2.21e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.81e-48,136;CL:0000988,1.48e-39,177;CL:0000766,5.30e-39,72;CL:0000037,1.54e-38,168;CL:0002032,3.79e-35,161;CL:0000837,3.79e-35,161;CL:0002031,1.44e-32,120;CL:0000557,6.61e-31,67;CL:0000763,9.21e-29,108;CL:0000049,9.21e-29,108;CL:0002087,2.37e-26,115;CL:0000860,2.40e-26,42;CL:0002057,2.40e-26,42;CL:0000839,1.74e-24,66;CL:0000473,2.12e-22,48;CL:0000234,2.12e-22,48;CL:0002009,4.46e-22,61;CL:0000094,9.28e-21,8;CL:0000081,4.25e-19,11;CL:0002194,9.34e-19,59;CL:0000576,9.34e-19,59;CL:0000040,9.34e-19,59;CL:0000559,9.34e-19,59;CL:0000134,8.04e-14,354;CL:0000624,8.40e-14,6;CL:0002320,2.52e-13,361;CL:0000219,1.41e-11,386;CL:0000097,1.45e-11,5;CL:0002028,1.45e-11,5;CL:0000623,2.02e-11,3;CL:0000825,2.02e-11,3;CL:0000767,3.37e-11,3;CL:0000791,7.13e-11,18;CL:0000789,7.13e-11,18;CL:0002420,7.13e-11,18;CL:0002419,7.13e-11,18;CL:0000790,7.13e-11,18;CL:0000048,3.99e-10,427;CL:0000723,8.05e-10,433;CL:0002393,1.76e-09,9;CL:0002397,1.76e-09,9;CL:0000034,2.00e-09,441;CL:0000771,2.22e-08,2;CL:0001014,1.41e-07,2;CL:0001016,1.41e-07,2;CL:0000084,1.93e-07,25;CL:0000827,1.93e-07,25;CL:0000838,6.84e-07,52 | |||
|ontology_enrichment_development_v019=CL:0002057;3.32e-19;42!CL:0000790;5.62e-11;18!CL:0000049;1.53e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.92e-21!80;UBERON:0001474!5.59e-20!86;UBERON:0002390!6.46e-20!102;UBERON:0003061!6.46e-20!102;UBERON:0004765!1.78e-17!101;UBERON:0001434!1.78e-17!101;UBERON:0002193!1.93e-17!112;UBERON:0002384!4.43e-13!375;UBERON:0002405!8.47e-13!115;UBERON:0002204!1.46e-09!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.07e-27,98;UBERON:0003061,1.07e-27,98;UBERON:0002371,1.98e-26,76;UBERON:0001474,6.99e-26,82;UBERON:0002193,2.24e-24,108;UBERON:0004765,6.08e-23,90;UBERON:0002405,5.44e-22,93;UBERON:0001434,6.25e-20,100;UBERON:0002384,1.20e-12,371;UBERON:0003081,4.40e-10,203;UBERON:0002204,3.77e-09,167 | |||
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| ||
|short_description=p5@DPH3 | |||
}} | }} |
Latest revision as of 11:52, 16 September 2015
Short description: | p5@DPH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_DPH3_5end |
Coexpression cluster: | C4300_Basophils_Eosinophils_Mast_CD14_CD34_CD4_CD8 |
Association with transcript: | -20bp_to_ENST00000462982_5end |
EntrezGene: | DPH3 |
HGNC: | 27717 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.07e-27 | 98 |
blood island | 1.07e-27 | 98 |
bone marrow | 1.98e-26 | 76 |
bone element | 6.99e-26 | 82 |
hemolymphoid system | 2.24e-24 | 108 |
skeletal element | 6.08e-23 | 90 |
immune system | 5.44e-22 | 93 |
skeletal system | 6.25e-20 | 100 |
connective tissue | 1.20e-12 | 371 |
lateral plate mesoderm | 4.40e-10 | 203 |
musculoskeletal system | 3.77e-09 | 167 |