FFCP PHASE1:Hg19::chr5:132073180..132073205,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:132073180..132073205,-
|short_description=p2@KIF3A
|description=CAGE_peak_2_at_KIF3A_5end
|association_with_transcript=22bp_to_ENST00000541316_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11127 | |EntrezGene=11127 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6319 | |HGNC=6319 | ||
|TSSclassifier=strong | |||
|UniProt=F5H1C2 | |UniProt=F5H1C2 | ||
|association_with_transcript=22bp_to_ENST00000541316_5end | |||
|cluster_id=chr5:132073180..132073205,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_KIF3A_5end | |||
|id=chr5:132073180..132073205,- | |||
|ontology_enrichment_celltype=CL:0000838!3.85e-11!52;CL:0000542!1.75e-10!53;CL:0000051!1.75e-10!53;CL:0000084!5.47e-07!25;CL:0000827!5.47e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000084;3.57e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.83e-11,52;CL:0000542,1.84e-10,53;CL:0000051,1.84e-10,53;CL:0000084,4.35e-07,25;CL:0000827,4.35e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.31e-09;82 | |||
|ontology_enrichment_disease=DOID:0050687!1.00e-06!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.71e-27!94;UBERON:0001016!1.71e-27!94;UBERON:0001017!5.82e-27!82;UBERON:0001049!1.11e-26!57;UBERON:0005068!1.11e-26!57;UBERON:0006241!1.11e-26!57;UBERON:0007135!1.11e-26!57;UBERON:0005743!4.59e-26!86;UBERON:0000955!1.59e-23!69;UBERON:0006238!1.59e-23!69;UBERON:0002780!6.00e-23!41;UBERON:0001890!6.00e-23!41;UBERON:0006240!6.00e-23!41;UBERON:0003080!1.43e-22!42;UBERON:0002616!1.54e-21!59;UBERON:0003075!1.21e-19!86;UBERON:0007284!1.21e-19!86;UBERON:0004121!3.62e-19!169;UBERON:0002020!5.65e-19!34;UBERON:0003528!5.65e-19!34;UBERON:0002346!8.52e-19!90;UBERON:0001893!9.29e-19!34;UBERON:0000924!9.40e-19!173;UBERON:0006601!9.40e-19!173;UBERON:0002791!4.07e-18!33;UBERON:0001869!8.22e-18!32;UBERON:0000153!5.36e-17!129;UBERON:0007811!5.36e-17!129;UBERON:0000033!1.81e-16!123;UBERON:0003056!1.50e-15!61;UBERON:0002619!9.52e-15!22;UBERON:0000956!5.35e-14!25;UBERON:0000203!5.35e-14!25;UBERON:0001950!1.83e-13!20;UBERON:0007023!1.45e-11!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.13e-17;41!UBERON:0001890;3.13e-17;41!UBERON:0003528;7.58e-17;34!UBERON:0002020;7.58e-17;34!UBERON:0001893;9.65e-17;34!UBERON:0001869;1.02e-16;32!UBERON:0002791;1.36e-16;32!UBERON:0000073;1.24e-15;53!UBERON:0002616;1.24e-15;53!UBERON:0002619;3.24e-15;22!UBERON:0000956;1.53e-14;25!UBERON:0000203;1.53e-14;25!UBERON:0001950;6.88e-14;20!UBERON:0000955;3.76e-12;68!UBERON:0001016;5.99e-12;83!UBERON:0001017;1.45e-11;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.21e-29,89;UBERON:0001049,1.72e-27,56;UBERON:0005068,1.72e-27,56;UBERON:0006241,1.72e-27,56;UBERON:0007135,1.72e-27,56;UBERON:0001017,2.25e-27,81;UBERON:0000073,1.17e-25,53;UBERON:0002616,1.17e-25,53;UBERON:0000955,6.94e-24,68;UBERON:0006238,6.94e-24,68;UBERON:0002780,2.43e-23,41;UBERON:0001890,2.43e-23,41;UBERON:0003080,2.43e-23,41;UBERON:0006240,2.43e-23,41;UBERON:0003528,2.71e-19,34;UBERON:0002020,2.71e-19,34;UBERON:0003075,3.71e-19,82;UBERON:0007284,3.71e-19,82;UBERON:0001893,4.50e-19,34;UBERON:0010371,1.79e-18,104;UBERON:0002346,2.74e-18,86;UBERON:0001869,4.14e-18,32;UBERON:0002791,5.78e-18,32;UBERON:0004121,7.70e-18,171;UBERON:0000924,7.70e-18,171;UBERON:0006601,7.70e-18,171;UBERON:0003056,2.04e-16,61;UBERON:0002619,5.46e-15,22;UBERON:0000956,3.17e-14,25;UBERON:0000203,3.17e-14,25;UBERON:0001950,1.11e-13,20;UBERON:0007023,3.90e-11,114;UBERON:0011216,5.31e-11,223;UBERON:0010314,9.44e-10,132 | |||
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| ||
|short_description=p2@KIF3A | |||
}} | }} |
Latest revision as of 05:56, 20 September 2015
Short description: | p2@KIF3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KIF3A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 22bp_to_ENST00000541316_5end |
EntrezGene: | KIF3A |
HGNC: | 6319 |
UniProt: | F5H1C2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.83e-11 | 52 |
lymphocyte | 1.84e-10 | 53 |
common lymphoid progenitor | 1.84e-10 | 53 |
T cell | 4.35e-07 | 25 |
pro-T cell | 4.35e-07 | 25 |