FFCP PHASE1:Hg19::chr6:31554456..31554512,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:31554456..31554512,+
|short_description=p6@LST1
|description=CAGE_peak_6_at_LST1_5end
|association_with_transcript=0bp_to_ENST00000339530,NM_205837,uc010js...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7940 | |EntrezGene=7940 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14189 | |HGNC=14189 | ||
|TSSclassifier=strong | |||
|UniProt=Q5STA8,O00453 | |UniProt=Q5STA8,O00453 | ||
|association_with_transcript=0bp_to_ENST00000339530,NM_205837,uc010jss.1_5end | |||
|cluster_id=chr6:31554456..31554512,+ | |||
|coexpression_cluster_id=C560 | |||
|description=CAGE_peak_6_at_LST1_5end | |||
|id=chr6:31554456..31554512,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.55e-84!172;CL:0000566!2.55e-84!172;CL:0002032!6.13e-79!165;CL:0000837!6.13e-79!165;CL:0000988!1.37e-76!182;CL:0000738!4.52e-75!140;CL:0002031!2.00e-65!124;CL:0002087!2.74e-63!119;CL:0000763!1.79e-52!112;CL:0000049!1.79e-52!112;CL:0000766!1.17e-45!76;CL:0002009!2.49e-39!65;CL:0000557!8.12e-39!71;CL:0000839!8.29e-39!70;CL:0002194!1.63e-37!63;CL:0000576!1.63e-37!63;CL:0000040!1.63e-37!63;CL:0000559!1.63e-37!63;CL:0002057!1.96e-37!42;CL:0000860!1.27e-33!45;CL:0000838!1.61e-22!52;CL:0000542!8.95e-22!53;CL:0000051!8.95e-22!53;CL:0000134!4.05e-15!358;CL:0002320!5.15e-14!365;CL:0000084!8.22e-13!25;CL:0000827!8.22e-13!25;CL:0000791!2.04e-12!18;CL:0000789!2.04e-12!18;CL:0002420!2.04e-12!18;CL:0002419!2.04e-12!18;CL:0000790!2.04e-12!18;CL:0000219!1.29e-10!390;CL:0002393!7.64e-10!9;CL:0002397!7.64e-10!9;CL:0000945!1.91e-09!24;CL:0000826!1.91e-09!24;CL:0000094!4.05e-09!8;CL:0000625!2.49e-08!11;CL:0000048!9.97e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.99e-34;33!CL:0002057;2.99e-34;33!CL:0000473;9.30e-31;39!CL:0000234;9.30e-31;39!CL:0000576;5.63e-29;48!CL:0000766;1.67e-24;69!CL:0000763;6.59e-19;100!CL:0002087;1.24e-18;104!CL:0000738;2.33e-18;136!CL:0000791;5.46e-16;18!CL:0000789;5.46e-16;18!CL:0002419;5.46e-16;18!CL:0000988;3.93e-15;177!CL:0000084;1.22e-14;25!CL:0000542;4.40e-13;53!CL:0000094;1.49e-11;8!CL:0000625;1.51e-10;11!CL:0002393;9.20e-09;6!CL:0002397;9.20e-09;6!CL:0000219;3.29e-08;193!CL:0000236;4.08e-08;13!CL:0000081;8.81e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.64e-97,168;CL:0002032,4.08e-90,161;CL:0000837,4.08e-90,161;CL:0000988,5.47e-90,177;CL:0000738,4.67e-86,136;CL:0002031,1.93e-74,120;CL:0002087,3.63e-74,115;CL:0000763,4.59e-65,108;CL:0000049,4.59e-65,108;CL:0000766,1.16e-58,72;CL:0002009,6.30e-53,61;CL:0000473,6.44e-51,48;CL:0000234,6.44e-51,48;CL:0002194,1.72e-50,59;CL:0000576,1.72e-50,59;CL:0000040,1.72e-50,59;CL:0000559,1.72e-50,59;CL:0000557,9.61e-50,67;CL:0000839,1.49e-49,66;CL:0000860,4.61e-49,42;CL:0002057,4.61e-49,42;CL:0000134,5.82e-26,354;CL:0002320,9.98e-25,361;CL:0000838,3.41e-21,52;CL:0000542,1.46e-20,53;CL:0000051,1.46e-20,53;CL:0000219,2.03e-20,386;CL:0000791,6.57e-16,18;CL:0000789,6.57e-16,18;CL:0002420,6.57e-16,18;CL:0002419,6.57e-16,18;CL:0000790,6.57e-16,18;CL:0000048,2.87e-15,427;CL:0000034,3.63e-15,441;CL:0000723,1.43e-14,433;CL:0000084,1.45e-14,25;CL:0000827,1.45e-14,25;CL:0002393,1.66e-12,9;CL:0002397,1.66e-12,9;CL:0000094,1.50e-11,8;CL:0000625,1.65e-10,11;CL:0000081,8.86e-08,11;CL:0000236,1.89e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;5.42e-35;42!CL:0000049;2.82e-17;108!CL:0000790;5.46e-16;18!CL:0000051;4.40e-13;53 | |||
|ontology_enrichment_disease=DOID:2531!4.34e-10!51;DOID:0060083!4.34e-10!51;DOID:1240!7.46e-10!39;DOID:8692!2.27e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.53e-10;31!DOID:1240;5.68e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,7.82e-11,31;DOID:1240,2.03e-10,39;DOID:2531,7.98e-09,51;DOID:0060083,7.98e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.31e-44!102;UBERON:0003061!1.31e-44!102;UBERON:0002193!5.22e-40!112;UBERON:0002371!9.85e-33!80;UBERON:0001474!1.10e-28!86;UBERON:0002405!2.98e-25!115;UBERON:0004765!1.62e-21!101;UBERON:0001434!1.62e-21!101;UBERON:0002384!6.42e-13!375;UBERON:0007023!4.90e-11!115;UBERON:0003081!1.25e-09!216;UBERON:0000178!1.52e-08!15;UBERON:0000179!1.52e-08!15;UBERON:0000463!1.52e-08!15;UBERON:0002204!6.12e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.40e-11;15!UBERON:0000179;2.40e-11;15!UBERON:0000463;2.40e-11;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.66e-56,98;UBERON:0003061,1.66e-56,98;UBERON:0002193,1.16e-51,108;UBERON:0002371,7.87e-43,76;UBERON:0002405,7.94e-41,93;UBERON:0001474,3.44e-38,82;UBERON:0004765,5.47e-33,90;UBERON:0001434,1.07e-27,100;UBERON:0002384,4.73e-23,371;UBERON:0003081,3.48e-15,203;UBERON:0000178,2.50e-11,15;UBERON:0000179,2.50e-11,15;UBERON:0000463,2.50e-11,15;UBERON:0002204,1.93e-10,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43197753338117,4.76183418809685,4.95877922276179,21.6350352266897,13.0501995353052,12.8497382352343,0,0,0,2.40148321798935,0.142169232487422,1.17440175733939,13.8498852132969,17.6479113773725,12.8036413722353,0.895661896959697,0.32389366601898,0.515151135268373,11.0502661472469,11.3362783106643,15.5253799160202,12.3187389560013,9.04569353648017,17.962969511916,15.8230815777183,12.5518746199259,17.9726494715325,10.6871161028352,5.80936215225443,14.8969135253776,11.8592673911841,9.00590295190891,18.8767726933871,8.87643287875617,13.799948164272,18.5407766481722,15.1731598085889,12.5662104301628,13.6391920170462,15.0908804086864,13.0498601678962,17.4390229718761,14.3211739196344,14.6015217157656,21.5016956258065,10.2917915447673,13.9945501675275,18.6712808590122,39.0822279677092,20.4100127966442,27.6749412071056,35.2711901799995,23.2774183904335,14.6260283894343,35.0565674801736,15.515500821529,24.6596607582256,3.51992488922645,7.64594055766984,2.66852776159066,2.98711155796555,5.60554381850417,6.8970292794538,5.94940385506376,5.72432252721218,5.69212969109448,5.87237189370939,6.11637165000366,6.60856642895129,2.24203425192614,2.10707267820062,2.55722701147983,4.71612915298998,4.5232329779892,13.8764791174263,4.23698946623668,1.89379122293893,3.89653456815823,13.480665283106,7.36514768687093,5.09527957542329,1.89562704635511,5.89220070738106,6.89314542067355,16.1149146511603,17.9627511560801,33.9069610310011,5.78317596332036,4.81573490561484,8.36284190439814,32.9730187249918,17.6281427056884,7.55980380061786,3.54227568827304,6.68987370080603,7.81300144627702,7.60361635558699,5.42070428679982,5.63141089079441,3.74792179657038,5.91943130110042,7.39015197228942,6.04820229674197,4.01160293675261,5.50332734754636,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,4.21911611751088,2.96020553408754,7.84451967061304,1.19245312152671,2.28797964312051,2.22874500797739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.6738876615733,62.0448422637321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,8.38779888887836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95460407304877,1.40402559083543,2.0808362720422,0,0,0,0,0,0,1.97065295158377,2.20121085033065,0,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.51366464488333,2.51128545716063,0,0,0,0,0,0,0,2.24170287987055,5.31983052545203,3.01878604803324,2.95188983443421,0,0,0,0,0,28.4622669099929,26.9245313283622,53.4596012332486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.71809722777571,10.138567438475,7.04401881502733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09629938322967,1.3071772551245,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.92947049429925,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,18.2681139323581,19.1159301785594,29.6216537330565,14.7703700783829,17.6885777427064,25.9389324477087,24.3014146757152,24.5868804651224,0,0,0,0,0,0.213425530045242,2.39139409093234,2.99369057149225,12.0648383183391,11.8537206325374,0,0.842391534340376,1.36940807419915,13.161111244934,10.0253790836027,2.37008488922245,7.70822760497758,3.63239472943886,12.3495408930195,4.46556948182494,9.5244636935622,9.61807263937388,11.8462890615455,67.4088929137039,0,0,4.59774653409171,0.99921590399346,0,0,0,0,0.111443384277478,0,0,0,0,0,0.562677665642051,0,0,0,0.398495976502139,0.828851746593443,0,0,0.369254416383208,0,0,0,20.9744671793017,0.197286811273867,9.57932369387759,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,28.6141234948062,2.19772358953035,2.32696354660219,0,0,0,0,1.90723894776454,0,0,0,0,0.995261931078505,0.442287822516696,2.4441205797345,0,0,0,0.269604531922708,1.60515529459758,0,0,0,0,0,2.41981432097328,0.30607276163049,1.51647791108371,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.52418000472609,0,0,0,0,0.290967049465258,0,0,0,0,0.126621591911757,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0.53746777989381,0,0,0,0,0,0,0.254019996197353,0,0.272406812223151,0,0,0,15.5231985170535,17.7974449548328,0.121499113316049,0,0.236417121897595,0.157363764404994,0,0,0,0,0.662091970365432,0,0,0,0,0,1.80603545648546,0,0,0.146552233678082,1.32506888912221,0.258565912723101,0.39669780522807,0,0,0.854299300541557,1.41483874589699,1.65695622138878,4.96166021811951,0,0.60896299190448,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0.332787154610557,0.807253238237985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0.398594520940089,0,0,0,0,5.59964708393804,18.3509775073922,0,0,0,0,0,0,0,0,0,0,0,0,0.558644917973244,0,0,0,0,0,0.256916900385838,0,0.15963385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| ||
|short_description=p6@LST1 | |||
}} | }} |
Latest revision as of 22:00, 17 September 2015
Short description: | p6@LST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LST1_5end |
Coexpression cluster: | C560_Neutrophils_Eosinophils_CD14CD16_Whole_CD14_acute_Dendritic |
Association with transcript: | 0bp_to_ENST00000339530, NM_205837, uc010jss.1_5end |
EntrezGene: | LST1 |
HGNC: | 14189 |
UniProt: | Q5STA8O00453 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.66e-56 | 98 |
blood island | 1.66e-56 | 98 |
hemolymphoid system | 1.16e-51 | 108 |
bone marrow | 7.87e-43 | 76 |
immune system | 7.94e-41 | 93 |
bone element | 3.44e-38 | 82 |
skeletal element | 5.47e-33 | 90 |
skeletal system | 1.07e-27 | 100 |
connective tissue | 4.73e-23 | 371 |
lateral plate mesoderm | 3.48e-15 | 203 |
blood | 2.50e-11 | 15 |
haemolymphatic fluid | 2.50e-11 | 15 |
organism substance | 2.50e-11 | 15 |
musculoskeletal system | 1.93e-10 | 167 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 7.82e-11 | 31 |
leukemia | 2.03e-10 | 39 |
hematologic cancer | 7.98e-09 | 51 |
immune system cancer | 7.98e-09 | 51 |